Gvermi6641.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6641.t1
Unique NameGvermi6641.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length421
Homology
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A2V3IDX6_9FLOR (Splicing factor U2AF 65 kDa subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX6_9FLOR)

HSP 1 Score: 498 bits (1282), Expect = 2.420e-172
Identity = 278/439 (63.33%), Postives = 328/439 (74.72%), Query Frame = 0
Query:    1 MHAASPPRASGRSRRSGSPYESERKRARVERLSPDVVPRRRPSDR----DAYESHRSPFSRPSYPPRDNNEVGMLNGSPYGARPVPIMQPPLSNTSKSRRLYIGNVPFHVGLTDTALTQFFSALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGMNLIPDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTS-DEQRTA-PYAQASRN-QTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPE---PVKRSGSSP-------VAPGNEQPE--YKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRSGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQIAAIGLPDCRTATEAAARSGTGSSSMRD 420
            MHAASPPR+S R+RR  SPYES+RKRAR +RLSP+ +PR RPSDR    D Y+ HRSP+ + SY  R   E G+ NGSPY +RP P+M  PL NTSKSRRLYIGNVP+ VGLTD A TQFFSALYIA FGPNKPGEPLPV+SFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSG+NL+P+ VNV AVMELC+KLGGI +AP QLAAIAA Q +    RTA P ++A +N  T ++ +VA  R   +   P + +      ++  R       +D+  RP    P  R  S+        V+   ++ +  Y VISL+NLVTD+DL G+EEDYEDLVADVQAECENYGSV E+ IP+ G WKRTAFI F  SS+AKKAVE+LKKRVFDKR+I A+GL D +TA+EAAAR GTGS  M+D
Sbjct:    1 MHAASPPRSSARARRPSSPYESDRKRARTDRLSPEAIPRTRPSDRNWERDPYDPHRSPYGKHSYSHRPKYENGLQNGSPYASRPTPMMHVPLPNTSKSRRLYIGNVPYQVGLTDIAFTQFFSALYIAAFGPNKPGEPLPVLSFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGLNLVPESVNVSAVMELCEKLGGIVAAPAQLAAIAACQPARTSSRTASPPSKAEQNLSTNKSEDVAVPRSE-DNFKPATDRNTIDPRARPLREARDMRSEDMTHRPSHKSPTDRGDSNARDRPGGNVSKAKDEADVAYTVISLQNLVTDEDLKGNEEDYEDLVADVQAECENYGSVVEVNIPKRGQWKRTAFIQFSISSDAKKAVEALKKRVFDKRKIVALGLADYQTASEAAARPGTGSGEMQD 438          
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A1X6NPD3_PORUM (RRM domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPD3_PORUM)

HSP 1 Score: 124 bits (310), Expect = 5.330e-27
Identity = 70/158 (44.30%), Postives = 92/158 (58.23%), Query Frame = 0
Query:   93 KSRRLYIGNVPFHVGLTDTALTQFFSALYIAGFG----PNK-------PGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGMNLIPDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYA 239
            K RRLY+GN+P H G+T+ AL + F+ALY+A FG    P+        P    PV S WLHA+GKF F+E+R EQ+AVN++  +GV LHGRPLR+NRPSDY            +P  V+  ++  LC +LGGI   P Q    AA     +   AP A
Sbjct:  388 KVRRLYVGNLPIHPGVTEQALLELFNALYLAAFGIVNLPSTGVDAVPAPATTPPVSSVWLHAEGKFSFIEMRTEQDAVNLIGLSGVSLHGRPLRINRPSDYHAAATGIVPPQPMP--VDYVSLGRLCSQLGGIVQPPAQQHVAAAQAQLLQPMPAPAA 543          
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A1I7YNL7_9BILA (Splicing factor U2AF subunit n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7YNL7_9BILA)

HSP 1 Score: 106 bits (264), Expect = 7.130e-22
Identity = 103/342 (30.12%), Postives = 161/342 (47.08%), Query Frame = 0
Query:   81 VPIMQPPLSNTSKSRRLYIGNVPFHVGLTDTALTQFFSA-LYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP------EVHNPSGMNLIPDVVNVRAVMEL----------CDKLG--GIASAPVQLAAIAASQTSDEQRTAP---YAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPR-------SGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
            VP++ P  S T +SRRLY+GN+PF  G  + A+  FF+  +++ G       +  PV++  ++ D  F F+E R   E    M F+G+   G+ L++ RP DY+P      +  N    N++ D  +   V  L          CD+L   G+         + A     +Q T     YA A       T     G   L G   G ++    L++Q QRP ++AA   V        +     ++ G  QP  +V+ L N+VT++DL  DEE YED++ D++ EC  YG V+ + IPR       SG+ K   F+ F +S+E +KA  +L  R F  R +
Sbjct:   24 VPVVGP--SVTCQSRRLYVGNIPF--GCNEDAMLDFFNQQMHLCGLAQ---ADGNPVLACQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMTAAYDQAVNMPVSNIVVDSPHKLFVGGLPSYLTEDQSWCDELPTCGVKELLSSFGQLKAFNLVTDQATGQSKGYAFAEYLDPTLTDQAIAG---LNGMQLGDKKLVVQLSNQGQRPTNSAAFAQV--------QVAGIDLSQGAGQP-TEVLCLMNMVTEEDLQDDEE-YEDILEDIKEECSKYGHVKSLEIPRAVAGTETSGVGK--VFVEFSDSNECQKAQAALTGRKFANRVV 343          
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A1I7YMR4_9BILA (Splicing factor U2AF subunit n=2 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7YMR4_9BILA)

HSP 1 Score: 107 bits (267), Expect = 1.240e-21
Identity = 101/332 (30.42%), Postives = 161/332 (48.49%), Query Frame = 0
Query:   81 VPIMQPPLSNTSKSRRLYIGNVPFHVGLTDTALTQFFSA-LYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP------EVHNPSGMNLIPDVVNVRAVMELC-----DKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPR-------SGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
            VP++ P  S T +SRRLY+GN+PF  G  + A+  FF+  +++ G       +  PV++  ++ D  F F+E R   E    M F+G+   G+ L++ RP DY+P      +  N    N++ D  +   V  L      D++  + S+  QL A          ++  YA A       T     G   L G   G ++    L++Q QRP ++AA   V        +     ++ G  QP  +V+ L N+VT++DL  DEE YED++ D++ EC  YG V+ + IPR       SG+ K   F+ F +S+E +KA  +L  R F  R +
Sbjct:  186 VPVVGP--SVTCQSRRLYVGNIPF--GCNEDAMLDFFNQQMHLCGLAQ---ADGNPVLACQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMTAAYDQAVNMPVSNIVVDSPHKLFVGGLPSYLTEDQVKELLSSFGQLKAFNLVTDQATGQSKGYAFAEYLDPTLTDQAIAG---LNGMQLGDKKLVVQLSNQGQRPTNSAAFAQV--------QVAGIDLSQGAGQP-TEVLCLMNMVTEEDLQDDEE-YEDILEDIKEECSKYGHVKSLEIPRAVAGTETSGVGK--VFVEFSDSNECQKAQAALTGRKFANRVV 495          
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A2G8KGU4_STIJA (Splicing factor U2AF subunit (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KGU4_STIJA)

HSP 1 Score: 103 bits (258), Expect = 1.300e-20
Identity = 101/336 (30.06%), Postives = 153/336 (45.54%), Query Frame = 0
Query:   91 TSKSRRLYIGNVPFHVGLTDTALTQFFSALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMNLI-------------PDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEY-----KVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRS-------GIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
            T ++RRLY+GN+PF  G+++ A+  FF+           PG  LPV++  ++ D  F F+E R   E    M F+GV   G+ L++ RP DY+P         VH P  ++ +             P+ +N   + EL    G + +    L   +A+  S       Y     + T+ T ++A     L G   G ++    L  Q    G+  A+Q           S  +   PG E P+      +V+ L N+VT ++L  DEE YED+V DV+ EC+ YG V  + IPR        G  K   F+ F N+ EAKKA E+L  R F  R +
Sbjct:  136 TRQARRLYVGNIPF--GVSEEAMVDFFNDHMHESKLSQAPG--LPVLAVQVNHDKNFAFLEFRSVDETTQAMAFDGVMFQGQALKIRRPKDYQPVPGMSETPTVHVPGVVSTVVQDSPHKIFIGGLPNYLNEDQIKELLSSFGTLKA--FNLVKDSATSLSKGYAFCEYI----DHTKTTQSIAG----LNGMQLGEKK----LIVQRASVGAKNAQQ-----------SQLAVSVPGLELPQTSGPVTEVLCLMNMVTPEELMDDEE-YEDIVEDVKEECQKYGLVRSLEIPRPYQGVDVPGTGK--IFVEFMNAVEAKKAQEALSGRKFANRVV 439          
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A7M7MFJ1_VARDE (Splicing factor U2AF subunit n=3 Tax=Gamasina TaxID=1723665 RepID=A0A7M7MFJ1_VARDE)

HSP 1 Score: 102 bits (253), Expect = 4.820e-20
Identity = 98/358 (27.37%), Postives = 154/358 (43.02%), Query Frame = 0
Query:   77 GARPVPIMQPPLSN-------------TSKSRRLYIGNVPFHVGLTDTALTQFFSALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP---------------------EVHNPSGMNLIPDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPR-------SGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
            G  P  ++ PP++              T ++RRLY+GN+PF  G T+  +  +F+    A       G P  V++  ++ D  F F+E R   E    M F+G+   G+ L++ RP DY+P                     +  +   +  +P+ +N   V EL    G + +    L    AS  S       YA A+       G        L G   G ++    L  Q     S  AK      P  ++  G +   PG+  P  +V+ L NLVT D+L  DEE+YED++ D+Q EC  YG V+ I IPR       +G+ K   F+ F + ++ +KA ++L  R F  R +
Sbjct:   81 GQIPATLLAPPITTDHQPSQPVVGSTITRQARRLYVGNIPF--GCTEQEMIDYFNVQMHACAFAQAQGNP--VLACQINMDKNFAFLEFRSIDETTAAMSFDGINFKGQSLKIRRPHDYQPMPGMSEQPGSVIPGVVSTVVQDSPHKVFIGGLPNYLNEDQVRELLMSFGQLKA--FNLVKDTASGLSKGYAFCEYADAAITDEAIAG--------LNGMQLGEKK----LIVQRA---SVGAKNSSMAAPVQIQVPGMASGVPGSSGPATEVLCLMNLVTPDEL-RDEEEYEDILEDIQEECSKYGHVKSIEIPRPIDGVDVNGLGK--VFVEFNSIADCQKAQQALTGRKFSNRVV 414          
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A1Y2CYT4_9BASI (Splicing factor U2AF subunit n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2CYT4_9BASI)

HSP 1 Score: 101 bits (251), Expect = 6.660e-20
Identity = 104/385 (27.01%), Postives = 161/385 (41.82%), Query Frame = 0
Query:   56 SRPSYPPRDNNEVGMLNGS---PYGARPVPIMQPPLSNTSK-SRRLYIGNVPFHVGLTDTALTQFFSA-------LYIAGFGPNKPGEPL----PVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYR------PEVHNPSGMNL-IPDVVNV------------RAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQT---GSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRSGIWKR---------------TAFILFKNSSEAKKAVESLKKRVF 388
            SRPS P      + M + S   P   RP   M  P+ + ++ SRRLY+GN+      T+  LT FF++       L   G G +  G  L    PVIS  L+ +  + F+E R  +EA N + F+G+      L++ RP DY       P  H P  ++  +PD +N               VMEL    G + S    L     +  S       Y   S  +    G        L G   G R      +SL +  +R G       +    +P+  + S   A   E    KV+ + N+V  ++L GDE DY++++ D++ ECE +G VEE+ IPR  +  +                 F+LF+   E  +A+ ++  R F
Sbjct:   11 SRPSLPVSMTGAMSMTDSSNPPPLFFRPPGSMAAPIGSFARQSRRLYVGNITMDA--TEEVLTHFFNSKMAELGLLSDKGLGEDLQGLGLKGDQPVISVHLNYEKNYAFVEFRNAEEATNALGFDGIIFQNAALKIRRPKDYMGPDADGPAPHVPGVVSSNVPDTINKIFIGGLPSYLTDDQVMELLKSFGELRS--FNLVKEGGTGASKGFAFCEYVDPSLTEVACQG--------LNGMELGDRYLVVQRASLGASARRDGQMTGSNSIDFPSQPLATAPSILAASAGEGQPTKVLQILNMVAPEELVGDE-DYQEIMEDIKEECEKFGKVEEVKIPRPVVTDKGKVDVKLSEAVKDLGKVFVLFEKEEETTRALRAIAGRQF 382          
BLAST of Gvermi6641.t1 vs. uniprot
Match: T1JXY2_TETUR (Splicing factor U2AF subunit n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1JXY2_TETUR)

HSP 1 Score: 100 bits (248), Expect = 1.740e-19
Identity = 99/346 (28.61%), Postives = 153/346 (44.22%), Query Frame = 0
Query:   77 GARPVPIMQPPLSNTSKSRRLYIGNVPFHVGLTDTALTQFF-SALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMNLI-------------PDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRS-------GIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
            G  PVPI+   L  T ++RRLY+GN+PF  G ++  + +FF S ++  GF    PG P  V++  ++ D  F F+E R   E  + M F+G+   G+ L++ RP DY+P        ++  P  ++ +             P+ +N   V EL    G       QL A    + S    +  YA         T     G   L G   G ++      S   + G  A        P  ++  G   V+ G  QP  +V+ L N+VT  +L  DEE Y+D++ D++ EC  YG V  I IPR        G+ K   F+ F    E ++A ++L  R F  R +
Sbjct:   63 GTVPVPIVGSTL--TRQARRLYVGNIPF--GCSEEEMMEFFNSQMHACGFA-QAPGNP--VLASQINLDKNFAFLEFRSIDETTSAMAFDGIAFKGQSLKIRRPHDYQPMPGMSEIPQITVPGVISTVVADSPHKIFIGGLPNYLNEDQVKELLMSFG-------QLRAFNLVKDSATGLSKGYAFCEYADVNITDQAIAG---LNGMQLGDKKLIVQRASVGAKSGPLAQPGAALAAPVQIQVPGLQVVSTGLGQP-TEVLCLMNMVTAQELSDDEE-YDDILKDIEEECSKYGVVRSIEIPRPIPGVEIPGVGK--VFVEFSTIPECQRAQQALTGRKFSDRVV 387          
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A023GDV6_AMBTT (Splicing factor U2AF subunit (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GDV6_AMBTT)

HSP 1 Score: 96.3 bits (238), Expect = 5.690e-18
Identity = 104/364 (28.57%), Postives = 161/364 (44.23%), Query Frame = 0
Query:   68 VGMLNGSPYGARPVP--IMQPPLSN-------TSKSRRLYIGNVPFHVGLTDTALTQFFSA-LYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMNLI-------------PDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRS-------GIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
            +G L G   G  P+P  I+QPP +        T ++RRLY+GN+PF  G ++  +  +F+A ++  GF    PG P  V++  ++ D  F F+E R   E    M F+G+   G+ L++ RP DY+P         V  P  ++ +             P+ +N   V EL    G       QL A    + S    +  YA     +   T     G   L G   G ++    L  Q    G+  ++ + AP    V+         G   P  +V+ L NLV  ++L  DEE+YED++ D+  EC  YG V+ I IPR        G  K  A++ F +  + +KA +SL  R F  R +
Sbjct:  112 IGSL-GXXXGVPPIPQAIVQPPAAVPIVGGTITRQARRLYVGNIPF--GCSEEEMMDYFNAQMHACGFS-QAPGNP--VLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMSETPSVAVPGVISTVVQDSPHKIFIGGLPNYLNEDQVRELLMSFG-------QLRAFNLVKDSATGLSKGYAFCEYVEVSTTDQAIMG---LNGMQLGDKK----LIVQRASVGAKNSQMNQAP----VQIQVPGLQLQGGAGPPTEVLCLMNLVCPEELK-DEEEYEDILEDIHEECNKYGVVKSIEIPRPIDGVEVPGCGK--AYVEFNSVIDCQKAQQSLTGRKFSNRVV 448          
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A8C4N7F7_EPTBU (Splicing factor U2AF subunit n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N7F7_EPTBU)

HSP 1 Score: 95.5 bits (236), Expect = 8.150e-18
Identity = 95/318 (29.87%), Postives = 148/318 (46.54%), Query Frame = 0
Query:   91 TSKSRRLYIGNVPFHVGLTDTALTQFFS-ALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMN-LIPDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPR-------SGIWKRTAFILFKNSSEAKKAVESLKKRVFDKR 391
            T ++RRLY+GN+PF  G T+ A+ +FF+  + +AG     PG P  V++  ++ D  F F+ELR   EA N + F+G+   G+ L++ RP DY P        +VH P  ++ ++PD  N   V       GG+   P  LA         + +   + Q    ++ + G        +     G +     L  Q     S  AK  VAP    V       V     QP  +++ L N+VT ++L  DEE+Y D++ D++ EC  YG V  I IPR       +G  K   F+ F   ++ +KA ++L  R F  R
Sbjct:  124 TRQARRLYVGNIPF--GATEDAMVEFFNNQMKLAGLA-TAPGSP--VLAVQINLDKNFAFLELRSVDEATNALAFDGILFMGQNLKLRRPHDYTPLPGLSEGPQVHVPGVVSTVVPDTPNKVFV-------GGL---PTYLA---------DDQVIMHLQEGVRESAKGGQYGYISKIVVTALNGMQVGDKKLVVQRA---SVGAKAPVAPVTVQVPGLDVPDVLQQGTQP-TRILCLLNMVTPEELI-DEEEYNDILDDIREECNKYGPVVSIEIPRPVDGIEVAGCGK--IFVEFATVTDCQKAQQALSGRKFANR 410          
The following BLAST results are available for this feature:
BLAST of Gvermi6641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDX6_9FLOR2.420e-17263.33Splicing factor U2AF 65 kDa subunit n=1 Tax=Gracil... [more]
A0A1X6NPD3_PORUM5.330e-2744.30RRM domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A1I7YNL7_9BILA7.130e-2230.12Splicing factor U2AF subunit n=1 Tax=Steinernema g... [more]
A0A1I7YMR4_9BILA1.240e-2130.42Splicing factor U2AF subunit n=2 Tax=Steinernema g... [more]
A0A2G8KGU4_STIJA1.300e-2030.06Splicing factor U2AF subunit (Fragment) n=1 Tax=St... [more]
A0A7M7MFJ1_VARDE4.820e-2027.37Splicing factor U2AF subunit n=3 Tax=Gamasina TaxI... [more]
A0A1Y2CYT4_9BASI6.660e-2027.01Splicing factor U2AF subunit n=1 Tax=Leucosporidiu... [more]
T1JXY2_TETUR1.740e-1928.61Splicing factor U2AF subunit n=1 Tax=Tetranychus u... [more]
A0A023GDV6_AMBTT5.690e-1828.57Splicing factor U2AF subunit (Fragment) n=1 Tax=Am... [more]
A0A8C4N7F7_EPTBU8.150e-1829.87Splicing factor U2AF subunit n=2 Tax=Eptatretus bu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 96..177
e-value: 0.039
score: 19.1
coord: 315..396
e-value: 0.017
score: 22.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 344..393
e-value: 1.6E-6
score: 27.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 95..181
score: 10.42841
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 314..393
score: 10.360188
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 90..201
e-value: 1.3E-17
score: 65.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 313..396
e-value: 5.3E-19
score: 70.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..283
NoneNo IPR availablePANTHERPTHR23139:SF9SPLICING FACTOR U2AF 65 KDA SUBUNITcoord: 11..395
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 11..395
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 42..178
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 331..395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1800220..1801482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6641.t1Gvermi6641.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1800220..1801482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6641.t1 ID=Gvermi6641.t1|Name=Gvermi6641.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=421bp
MHAASPPRASGRSRRSGSPYESERKRARVERLSPDVVPRRRPSDRDAYES
HRSPFSRPSYPPRDNNEVGMLNGSPYGARPVPIMQPPLSNTSKSRRLYIG
NVPFHVGLTDTALTQFFSALYIAGFGPNKPGEPLPVISFWLHADGKFGFM
ELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGMNLIPDVVN
VRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTG
NVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSG
SSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGS
VEEIVIPRSGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQIAAIGLPD
CRTATEAAARSGTGSSSMRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf