Gvermi6638.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6638.t1 vs. uniprot
Match: A0A2V3IR06_9FLOR (Ribosomal silencing factor RsfS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR06_9FLOR) HSP 1 Score: 105 bits (263), Expect = 1.170e-26 Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLWLPDTPP 95
DV ++DV +KA+FAD ++C + +H+RAIA L + + + VTL+G VS+CG +W+VVDIG VVH+MT ARQ Y+LE LW+PDTPP
Sbjct: 90 DVVIIDVREKATFADSFLLCCAHTPAHIRAIAEQLAHFINSAQVTLDGHSVSICGHQHDEWLVVDIGHTVVHIMTEHARQQYRLEDLWIPDTPP 183
BLAST of Gvermi6638.t1 vs. uniprot
Match: A0A553FJF4_9GAMM (Ribosomal silencing factor RsfS n=1 Tax=Thalassomonas sp. M1454 TaxID=2594477 RepID=A0A553FJF4_9GAMM) HSP 1 Score: 89.0 bits (219), Expect = 6.450e-21 Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLWLPD 92
D+ V+DV +KASF DC+IVCSG ++ HVR+I L + +A+G+++ G + G D +W +VD+G I+VHVMT + R Y+LE LW D
Sbjct: 21 DIVVIDVMEKASFTDCMIVCSGNSSRHVRSITENLNTEAKAKGLSIIG----IEGNDIGEWSLVDLGDIIVHVMTDDIRDTYKLEDLWAKD 107
BLAST of Gvermi6638.t1 vs. uniprot
Match: UPI0019CFA13D (ribosome silencing factor n=1 Tax=Thalassotalea sp. G2M2-11 TaxID=2787627 RepID=UPI0019CFA13D) HSP 1 Score: 85.5 bits (210), Expect = 1.380e-19 Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLW 89
D+ +D+ADK+ FAD +IV SG ++ HV++IA L D RA GV + + + G D +W +VD+G IV+H+MT E+R YQLEQLW
Sbjct: 21 DITTLDIADKSDFADYMIVASGNSSRHVKSIAQSLVTDCRAEGV----EPLGIEGNDVGEWALVDLGDIVIHIMTDESRDKYQLEQLW 104
BLAST of Gvermi6638.t1 vs. uniprot
Match: A0A068YVI7_9GAMM (Ribosomal silencing factor RsfS n=4 Tax=Serratia symbiotica TaxID=138074 RepID=A0A068YVI7_9GAMM) HSP 1 Score: 84.3 bits (207), Expect = 3.920e-19 Identity = 39/88 (44.32%), Postives = 60/88 (68.18%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLW 89
D+ V++V K+S DC+I+C+G +T HV +IA L RA G+ L+G + G ++ DW+VVD+G ++VHVM E+R Y+LE+LW
Sbjct: 21 DIVVLNVQGKSSITDCMIICTGTSTHHVMSIADHLVQQSRAAGIALHG----MKGQEASDWVVVDLGEVIVHVMQEESRHLYELEKLW 104
BLAST of Gvermi6638.t1 vs. uniprot
Match: A0A1J4QJ50_9GAMM (Ribosomal silencing factor RsfS n=1 Tax=Oceanisphaera psychrotolerans TaxID=1414654 RepID=A0A1J4QJ50_9GAMM) HSP 1 Score: 84.0 bits (206), Expect = 6.890e-19 Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLW 89
D+ V+DV+ K+S DC+IVCSG ++ HV +IA L + R G+ +L+S+ G D+ +W++VD+G ++VHVM E R YQLE+LW
Sbjct: 21 DIQVLDVSGKSSITDCMIVCSGNSSRHVNSIAEHLATEARHAGL----NLLSVEGKDAGEWVLVDLGDVIVHVMQEETRDFYQLEKLW 104
BLAST of Gvermi6638.t1 vs. uniprot
Match: UPI001AA042F8 (ribosome silencing factor n=1 Tax=Oceanisphaera sp. DM8 TaxID=2818389 RepID=UPI001AA042F8) HSP 1 Score: 83.6 bits (205), Expect = 9.770e-19 Identity = 40/92 (43.48%), Postives = 61/92 (66.30%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLWLPDT 93
D+ V+DV K+S DC+IVCSG ++ HV AIA + + + G+T +S+ G D+ +W++VD+G ++VHVM E R YQLE+LW +T
Sbjct: 21 DIQVLDVTGKSSITDCMIVCSGNSSRHVNAIAENMVMEAKQAGLTY----LSMQGKDAGEWVLVDLGDVIVHVMQEETRDFYQLEKLWGSNT 108
BLAST of Gvermi6638.t1 vs. uniprot
Match: UPI001AD9C835 (ribosome silencing factor n=1 Tax=Endozoicomonas sp. G2_1 TaxID=2821091 RepID=UPI001AD9C835) HSP 1 Score: 83.2 bits (204), Expect = 1.120e-18 Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLW 89
D+ V+DV KASFAD +IVCSG ++ HV++IA + + RA GV + + + G D +W +VD+G +VVHVMT E R YQLEQLW
Sbjct: 21 DITVLDVKGKASFADAMIVCSGNSSRHVKSIAEHVILESRAAGV----EPLGVEGNDIGEWSLVDLGDVVVHVMTDETRDTYQLEQLW 104
BLAST of Gvermi6638.t1 vs. uniprot
Match: A0A4V0ZFV4_9GAMM (Ribosomal silencing factor RsfS n=1 Tax=Litorilituus sediminis TaxID=718192 RepID=A0A4V0ZFV4_9GAMM) HSP 1 Score: 83.2 bits (204), Expect = 1.180e-18 Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLW 89
D+ ++++DKASFAD +++CSG + HV++IA + D RA G+ G + G D +W +VD+G ++VHVMT E R Y LEQLW
Sbjct: 21 DIVSLNISDKASFADYMVICSGNSNRHVKSIAQAIAMDCRAEGIEPKG----IEGNDVGEWALVDLGDVIVHVMTDEQRDKYNLEQLW 104
BLAST of Gvermi6638.t1 vs. uniprot
Match: A0A1W5DFZ8_9GAMM (Ribosomal silencing factor RsfS n=39 Tax=Enterobacterales TaxID=91347 RepID=A0A1W5DFZ8_9GAMM) HSP 1 Score: 82.8 bits (203), Expect = 1.580e-18 Identity = 39/88 (44.32%), Postives = 61/88 (69.32%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLW 89
D+ +DV K+S DC+I+C+G +T HV +IA+ L + R+ G+ L G + G ++ DWIVVD+G ++VHVM E+R+ Y+LE+LW
Sbjct: 21 DIIALDVQGKSSITDCMIICTGTSTRHVMSIANHLVQESRSAGMELFG----MKGQEASDWIVVDLGEVIVHVMQEESRRLYELEKLW 104
BLAST of Gvermi6638.t1 vs. uniprot
Match: A0A2S4XG02_SERMA (Ribosomal silencing factor RsfS n=7 Tax=Serratia TaxID=613 RepID=A0A2S4XG02_SERMA) HSP 1 Score: 82.4 bits (202), Expect = 2.250e-18 Identity = 39/88 (44.32%), Postives = 60/88 (68.18%), Query Frame = 0
Query: 2 DVAVVDVADKASFADCLIVCSGYATSHVRAIAHGLKNDMRARGVTLNGDLVSLCGTDSLDWIVVDIGPIVVHVMTAEARQHYQLEQLW 89
D+ +DV K+S DC+I+C+G +T HV +IA + + RA G+ L G + G ++ DWIVVD+G ++VHVM E+R+ Y+LE+LW
Sbjct: 21 DIIALDVQGKSSITDCMIICTGTSTRHVMSIASHVVQESRAAGMELYG----MKGQEASDWIVVDLGEVIVHVMQEESRRLYELEKLW 104 The following BLAST results are available for this feature:
BLAST of Gvermi6638.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6638.t1 ID=Gvermi6638.t1|Name=Gvermi6638.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=102bpback to top |