Gvermi6632.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6632.t1
Unique NameGvermi6632.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length540
Homology
BLAST of Gvermi6632.t1 vs. uniprot
Match: A0A2V3INC8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INC8_9FLOR)

HSP 1 Score: 308 bits (789), Expect = 6.410e-95
Identity = 227/549 (41.35%), Postives = 319/549 (58.11%), Query Frame = 0
Query:    5 PIFAITGFGGISLAVTVLVVRRVARKSHKKPDSSQQVV-------AIPVLDVSSSTDDLLKTESIVYNSDANSPTRTVNTETPSSIDSISARSTAVIESHQVTAS--LLPKSISTLSSATYDSRICVDTYAALLTNEDGNHDDDDEGNFDDAKTCSDDLESVAGIRTRENPIEHEE----TTATFPNTLVLVDKAPSDGGTESGTALLDGEYEQTDEFLVQPRSPILRQQILPTLFESETGIETNYEQPSYVNNSMYELDYDADID--VRIEREQDHLPSVFTESAIVSHEVGH--DLQRQSAAVLILNSPGKSIRERAPLLVSAAPLASVPALEDVVTCTPIPATEIRIDGEQPETTNESQQEQDLTYQSTSDXXXXXXXXXXXXXXGSDSDEDVLMNEVPSPLRETDSGENESNNVLQESNDRQN-VSLPRFRQIVSDSNAPILPMVSREQSSLSSPEQTGSGSPAATRPLCKKDIEQVRAMTNIEASDDKEKENTFQSTSTSPERLSRKPWRSDRLSNVFSRKNSVRRLRIPERIRRRQRLPQKFN 535
            P+F I G GG  +A+T +V+R++AR    K    +QV+        +   D+ S T++LL+T + V       P     TE   S+D+ SARS AVIESH VT S   +PKSIS LSS T+DS++CVD YA+LL NE G H+D      DDA T +D+  S  G       ++HEE       T P T  LV+    +  T SGT  + G YEQ  EFL++P+SP++RQ     + E E  +  N    S   ++  E DYDAD D    +   +  +PS+F + AI+S E+GH  + QR+ +AV+I  S  ++ RER  +  +AAPLASVPALEDVV+  PIP+TEI +  + P    E+           SD               S      + N   SP  E ++    S+++ + ++D Q+ VSL  F+ ++ + N PI+P V+RE+S L+S E   +  PAATRPL ++D+E+++A+ N   ++D +KEN FQS STSPERLSRKPWRS+R+S+VFSRKNSVRRLRIP+RIRRR  L QK N
Sbjct:    3 PVFIIGGVGGFGIAITAVVLRQLARGRKAKRSKPKQVIEYQSTGCCLSRRDIYSETENLLETCNTVC------PACVQKTEPTLSMDAASARSGAVIESHPVTTSSPFIPKSISRLSSMTFDSKVCVDAYASLLANE-GFHEDVS----DDAGTITDESGSRDGSEEHRATVQHEEGPRVDMETEPTTESLVENMSGEADTHSGTHWVQGNYEQNSEFLLEPKSPVIRQPTPIRVPEREISVSQN-SSSSPTLHAPLEFDYDADDDGGTGVNGAEVPVPSLFLQDAIISSEMGHSPEPQREGSAVIISTSSARTGRERTIVSFTAAPLASVPALEDVVSGNPIPSTEILVHEDVPNAVTEATNGHAHGIPLPSDHESNDRDLVSLEEEQSLPQIPFMRNLSTSP-EEQETNSQVSSDLSRHNSDAQSEVSL--FK-VICNKNTPIIPTVTRERSELASTEGIEADGPAATRPLREEDVERMKALANPPRAEDSDKENAFQSASTSPERLSRKPWRSERISSVFSRKNSVRRLRIPDRIRRRNMLTQKNN 535          
The following BLAST results are available for this feature:
BLAST of Gvermi6632.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INC8_9FLOR6.410e-9541.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..454
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..539
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1784361..1785980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6632.t1Gvermi6632.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1784361..1785980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6632.t1 ID=Gvermi6632.t1|Name=Gvermi6632.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=540bp
MPLPPIFAITGFGGISLAVTVLVVRRVARKSHKKPDSSQQVVAIPVLDVS
SSTDDLLKTESIVYNSDANSPTRTVNTETPSSIDSISARSTAVIESHQVT
ASLLPKSISTLSSATYDSRICVDTYAALLTNEDGNHDDDDEGNFDDAKTC
SDDLESVAGIRTRENPIEHEETTATFPNTLVLVDKAPSDGGTESGTALLD
GEYEQTDEFLVQPRSPILRQQILPTLFESETGIETNYEQPSYVNNSMYEL
DYDADIDVRIEREQDHLPSVFTESAIVSHEVGHDLQRQSAAVLILNSPGK
SIRERAPLLVSAAPLASVPALEDVVTCTPIPATEIRIDGEQPETTNESQQ
EQDLTYQSTSDEQESSEEGSTTTDDGSDSDEDVLMNEVPSPLRETDSGEN
ESNNVLQESNDRQNVSLPRFRQIVSDSNAPILPMVSREQSSLSSPEQTGS
GSPAATRPLCKKDIEQVRAMTNIEASDDKEKENTFQSTSTSPERLSRKPW
RSDRLSNVFSRKNSVRRLRIPERIRRRQRLPQKFNQKTL*
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