Gvermi6595.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6595.t1
Unique NameGvermi6595.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length356
Homology
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BLAST of Gvermi6595.t1 vs. uniprot
Match: R7Q3L8_CHOCR (NUFIP1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3L8_CHOCR)

HSP 1 Score: 88.2 bits (217), Expect = 3.370e-17
Identity = 69/174 (39.66%), Postives = 104/174 (59.77%), Query Frame = 0 
Query:  198 LATSRNVLSRLHTKLPGSSPEEIETWVKARKANWPSRANVERKLAAEKEKNN----RKESISKQSNAFSEAMTKLA-DYSSSEEDGEHVNSKQK--KASQRGKR------SRKRQGGXXKDGQSRRRLEAKNSE------RKPTLLRMLLEREIRQEQSVLLQAFRYIITKKVN 352
            +  S+ +L++L   LPG S  EI+ WV ARK NWPSRANV RKLA +K++       +    +++     ++T LA +Y SS+ + +  + K +  KA   GK+      SR+R+ G  K  Q  RR   K++       R+P+LL+MLL++EI +E++VLLQAFRYII +K N
Sbjct:    1 MTMSKEILAKLQASLPGESQAEIDRWVAARKQNWPSRANVARKLAEKKKREQGGAQMRGEAKRRARVADNSLTMLAAEYGSSDGEIDETDKKTQSIKAQPVGKKDTKSVASRQRERGVAKKRQRGRRNGKKSNRNVSTTPRRPSLLKMLLQKEIHEERNVLLQAFRYIINQKRN 174
The following BLAST results are available for this feature:
BLAST of Gvermi6595.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q3L8_CHOCR3.370e-1739.66NUFIP1 domain-containing protein n=1 Tax=Chondrus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..318
NoneNo IPR availablePANTHERPTHR13309NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1coord: 210..349
IPR019496Nuclear fragile X mental retardation-interacting protein 1, conserved domainPFAMPF10453NUFIP1coord: 138..175
e-value: 3.9E-6
score: 26.6
coord: 215..252
e-value: 3.4E-8
score: 33.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1499961..1501028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6595.t1Gvermi6595.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1499961..1501028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6595.t1 ID=Gvermi6595.t1|Name=Gvermi6595.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=356bp
MGLPPPPPIAQLHPPVNYYSAPHIPTASPPFGQFPPPSQQISLGRLADVN
ASFIPPHHRTAPEPHSVRFQQEHQRQRRWNRHHSARLQDRRFRSGKPPPS
RNVPGVATPQQRNEKHQLQTEDNSTKEVLSRLNTKLPGSSPADVEAWVAA
RKANWPSKTNTDRKEAVALKRRKAGAIDSASNKPSNVRYGTDCTQRDLAT
SRNVLSRLHTKLPGSSPEEIETWVKARKANWPSRANVERKLAAEKEKNNR
KESISKQSNAFSEAMTKLADYSSSEEDGEHVNSKQKKASQRGKRSRKRQG
GRGKDGQSRRRLEAKNSERKPTLLRMLLEREIRQEQSVLLQAFRYIITKK
VNETS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019496NUFIP1_cons_dom