Gvermi6562.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6562.t1
Unique NameGvermi6562.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length389
Homology
BLAST of Gvermi6562.t1 vs. uniprot
Match: A0A2V3IH98_9FLOR (30S ribosomal protein S1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH98_9FLOR)

HSP 1 Score: 593 bits (1529), Expect = 1.070e-211
Identity = 301/356 (84.55%), Postives = 333/356 (93.54%), Query Frame = 0
Query:   33 TRMVVIARVPKTESVSRFEKMRLRFGEPEVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASLDDIGVDPVPAEAA 388
            TRMV  AR P  +S+SRFE+MR RFG P VSEEKSGFTY+DFE+A++ FDY FENGDIC+GRV Q ERNGALVDIGAKASA+CPL EMSM KV+K EHA+TIGEDREFQ+ISREDANGQLKVSIRRIE+ARAWERVAQLQAEDVTV A V ++NRGGSLV++EGLRAFLPSSHTSIR+PREELIG+ELPLKFLEV +EKGRLVVSHRRA+VEKQMTNLVAGEVVEGV+RG+KPYGAF+DIGGVSGLLHVSQISHDHVGDI A +PDG+V+KCMIINQDKEKGRISLSTKTLEPEPGDMLRD+ +VYE+AEEMAARYH+RLEEERKAAADVADDIVSTLD+ SLDDIGVDPVPAEAA
Sbjct:    2 TRMVFTARAPSKDSISRFERMRQRFGVPAVSEEKSGFTYSDFEEAIADFDYRFENGDICSGRVYQYERNGALVDIGAKASAFCPLHEMSMIKVEKAEHALTIGEDREFQVISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVLAEVIAVNRGGSLVMIEGLRAFLPSSHTSIRTPREELIGVELPLKFLEVSAEKGRLVVSHRRAVVEKQMTNLVAGEVVEGVIRGVKPYGAFVDIGGVSGLLHVSQISHDHVGDIPAVVPDGTVVKCMIINQDKEKGRISLSTKTLEPEPGDMLRDAAMVYERAEEMAARYHKRLEEERKAAADVADDIVSTLDIGSLDDIGVDPVPAEAA 357          
BLAST of Gvermi6562.t1 vs. uniprot
Match: R7QL07_CHOCR (30S ribosomal protein S1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL07_CHOCR)

HSP 1 Score: 579 bits (1492), Expect = 1.420e-205
Identity = 298/389 (76.61%), Postives = 340/389 (87.40%), Query Frame = 0
Query:    1 MAFVTSFYGTAVAPSKQSTSLRRSCARKPSPRTRMVVIARVPKT-ESVSRFEKMRLRFGEPEVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASLDDIGVDPVPAEAA 388
            MAFV SFYG   A ++ +   R+SC+R   P TRMV  AR P + +S+S+F++MR ++G   V  + SGFTY DFE A+S+FDYSFE GDIC+GRV Q E NGAL+DIGAKASAYCP+ EMSM +VDKPE A+TIGEDREFQIISREDANGQLK+SIRRIE+ RAWERVAQLQAEDVTVHA V S+NRGG LV++EGLRAFLP SH S+R+PRE+L+G+ELPLKFLEVD+EK RLVVSHRRA+VEKQMTNLVAGE+V+GVVRGIKPYGAF+DIGG+SGLLHVSQISHDHV DIGA + DGS IKCMIINQDKEKGRISLSTKTLEPEPGDM+RDS  VYEKA+EMAARYH+RLEEERKAAADVADDIVSTLDMASLDD+GVDPV  EAA
Sbjct:    1 MAFVNSFYGLPFASNRANPVSRKSCSRLSYP-TRMVATARPPASNQSMSKFDRMRDKYGLKRVQPKNSGFTYEDFETAISEFDYSFEEGDICSGRVFQYEPNGALIDIGAKASAYCPVAEMSMIRVDKPEQALTIGEDREFQIISREDANGQLKLSIRRIEFGRAWERVAQLQAEDVTVHAEVISVNRGGCLVMIEGLRAFLPGSHISLRTPREDLVGVELPLKFLEVDTEKNRLVVSHRRAVVEKQMTNLVAGEIVKGVVRGIKPYGAFVDIGGISGLLHVSQISHDHVADIGAVVQDGSEIKCMIINQDKEKGRISLSTKTLEPEPGDMIRDSAFVYEKADEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDLGVDPVATEAA 388          
BLAST of Gvermi6562.t1 vs. uniprot
Match: UPI001E1D3BAF (LOW QUALITY PROTEIN: 30S ribosomal protein S1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3BAF)

HSP 1 Score: 496 bits (1278), Expect = 1.300e-172
Identity = 262/409 (64.06%), Postives = 316/409 (77.26%), Query Frame = 0
Query:    1 MAFVTSFYGTAVAPSKQSTSLR---------RSCARKPSPRTRMVVIARVP-----KTESVSR-------FEKMRLRFGEPEVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASLDDIGVDPVPAEAA 388
            +AFV +  GT  A S   +SL          RS     S    M V A +       T SVSR       F++MRL+FG P   E K+GF+Y +F  AMS FDY+F++GD C GRV Q E NGALVDIGAKASAYCPL EMSM+++DKPE A+ IGEDREFQIIS ED+NGQL+VSIRR+E+  AWERVAQLQAEDVTV A V  +NRGG LVLVEGLRAFLP SH ++R+PRE+++G+ELPLKFLEVD+ K RLVVSHRRA+VE+Q+T LV G++++GVVRG+KPYGAFID+ GVSGLLH+SQISHDH+ DI A L +G+ IKCM++ QDKEKGRISLSTKTLEPEPGD +RD ++V+++A+EM ARYH RLEEERKAAADVADDIVST DMASLDD+ +DPV A  A
Sbjct:    6 VAFVGTLAGTTGALSSSQSSLMGSACHICPSRSLLSSRSANPHMTVTAEIAVETASPTLSVSRTKSTMTKFDRMRLKFGLPTPEEAKTGFSYDEFANAMSDFDYNFKDGDRCVGRVYQYEPNGALVDIGAKASAYCPLPEMSMHRLDKPERALDIGEDREFQIISNEDSNGQLRVSIRRLEFTLAWERVAQLQAEDVTVXAEVVQVNRGGCLVLVEGLRAFLPGSHMAMRNPREDMVGVELPLKFLEVDAAKNRLVVSHRRAMVERQITALVTGQIIQGVVRGVKPYGAFIDLNGVSGLLHISQISHDHISDISAVLKEGTEIKCMVLQQDKEKGRISLSTKTLEPEPGDFIRDPQMVFDRADEMCARYHARLEEERKAAADVADDIVSTXDMASLDDLAIDPVDAPMA 414          
BLAST of Gvermi6562.t1 vs. uniprot
Match: A0A7S1TIC8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIC8_9RHOD)

HSP 1 Score: 418 bits (1074), Expect = 9.640e-142
Identity = 210/334 (62.87%), Postives = 272/334 (81.44%), Query Frame = 0
Query:   47 VSRFEKMRLRFGEPEVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASLDDIGV 380
            +++F+KMRL+FG  +   E SGF+Y DFEQ M K++ SF   D+C+G+V  +E+ GALVDIGAKASA+ PL EM+++  D  E  + +G++R+FQIIS ED NGQL +S +R+E+ARAWER+AQ+Q+EDVTV A + S+NRGG++V VE LR F+P SH S  +  EE IG E+ LKFLEVD EKGR+V+S RRA+VE+QMT+L  G V+EG V+ IKPYGAF+D+GG+SGLLH+SQISHDHV +I  +L  G  IKCMIINQDKEKGRISLSTKTLEPEPGDML++ +LVYEKAEEMA RYH++ EEE+KAAADVA+DIV++LDMASL+D+ +
Sbjct:   62 MTKFDKMRLKFGFAKGKVEDSGFSYDDFEQEMGKYERSFVIDDVCSGKVYAVEQTGALVDIGAKASAFLPLSEMAIHPPDAIEDLLQVGDERDFQIISSEDKNGQLTISCKRLEFARAWERLAQMQSEDVTVRATITSVNRGGAMVEVENLRGFVPGSHMSSTANAEEKIGSEIRLKFLEVDQEKGRVVMSERRALVEQQMTDLAPGVVMEGTVKSIKPYGAFVDVGGMSGLLHISQISHDHVDNIEKSLIIGMSIKCMIINQDKEKGRISLSTKTLEPEPGDMLKNPQLVYEKAEEMAERYHKKREEEKKAAADVAEDIVASLDMASLEDLAI 395          
BLAST of Gvermi6562.t1 vs. uniprot
Match: A0A1X6NTC5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTC5_PORUM)

HSP 1 Score: 385 bits (988), Expect = 8.680e-129
Identity = 209/377 (55.44%), Postives = 269/377 (71.35%), Query Frame = 0
Query:    5 TSFYGTAVAPSKQSTSLRRSCARKPSPRTRMVVIARVPKTESVSRFEKMRLRFGEPEVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIR-SPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASLDDIGV 380
            +SF+G   AP+     +RR          RM   A  P     ++F++MR ++G P V E K G  Y +FE A+    Y+F  GDI  G V QL+ NGA+VD+GAKASA CP VE+S+ +    E  +  G++REFQII  E+A+G+L +SIRRIE++RAW RVAQL AEDVT+   V S+NRGG LV+VEGLRAFLP SH S+R   +E+L+GMELPLK ++VD ++ +LVVSHR A    +MT+L  G VV G VR +KPYGAF+DIGGVSGLLH+SQISHDHV DI A L  G  +K  ++NQDK+KGRISLSTK LE EPGDM+ DS  V+  AEE+A RYH R+EEER+AA+ VA+DIVS+LD+ASLDD+G+
Sbjct:   16 SSFFGARAAPTSD-VQVRRPVTTG----ARMQAAAGTP-----TKFDRMRQKWGAPAVDESKGGM-YQEFESALEGLSYNFSEGDIIPGVVQQLDPNGAMVDVGAKASALCPTVEVSIAQGTALEDVLAPGDEREFQIIRSENADGELLLSIRRIEFSRAWARVAQLAAEDVTIMGTVTSVNRGGGLVVVEGLRAFLPGSHISVRRESQEDLVGMELPLKLIQVDPDEKKLVVSHRLAAAASRMTSLETGSVVAGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSAGMEVKAYVMNQDKDKGRISLSTKVLENEPGDMMTDSAAVFAGAEEIAERYHARVEEERRAASSVAEDIVSSLDIASLDDLGL 381          
BLAST of Gvermi6562.t1 vs. uniprot
Match: A0A5J4Z972_PORPP (30S ribosomal protein S1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z972_PORPP)

HSP 1 Score: 379 bits (973), Expect = 8.030e-127
Identity = 188/336 (55.95%), Postives = 256/336 (76.19%), Query Frame = 0
Query:   46 SVSRFEKMRLRFG-EPEVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASLDDIGV 380
            + ++F+KMRL+FG     ++ +SGF+Y +FE  M  +D     GD+  G V Q++  GA VDIGAKASA+ P  E+S+   ++ E  +  GE REF++ S ED NGQL VS+++IE+ R WER+AQLQAED+T  A V S+NRGG++V VE LR F+P SH  + +  ++++G  LPLKF+EVD EKGR+V+SHRRAIV+ QMT++  G VVEG+VRG+KPYG F+D+ G++GL+H+SQISHD V +    +   S +KCM+I+QDKEKGRISLSTKTLEPEPGDML+    VY++AEEMA +YH+RLEEERKAAADVADDIVS+LD+A++DD+ +
Sbjct:   42 AATKFDKMRLKFGVRTPKTQHESGFSYDEFESQMVNYDVKIGMGDLVQGTVVQIDSKGAFVDIGAKASAFLPEEELSIVGAERVEDFIEPGEQREFEVCSTEDVNGQLTVSLKKIEFRRCWERLAQLQAEDITTFATVESVNRGGAMVRVENLRGFIPGSHLGMAN-NQDIVGTNLPLKFIEVDPEKGRVVLSHRRAIVQSQMTDIETGAVVEGIVRGVKPYGIFVDVNGLTGLIHISQISHDRVDNPENVISVNSKVKCMVISQDKEKGRISLSTKTLEPEPGDMLKSPDAVYDRAEEMAEKYHKRLEEERKAAADVADDIVSSLDIANIDDLPI 376          
BLAST of Gvermi6562.t1 vs. uniprot
Match: A0A1X6NLP1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLP1_PORUM)

HSP 1 Score: 375 bits (963), Expect = 6.020e-125
Identity = 195/334 (58.38%), Postives = 250/334 (74.85%), Query Frame = 0
Query:   48 SRFEKMRLRFGEPEVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIR-SPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASLDDIGV 380
            ++F++MR ++G P V E K G  Y +F  A+    Y+F  GDI  G V QL+ NGA++D+GAKASA CP VE+S+ +    E  +T+G+ REFQII  E+A+G+L +SIRRIEY+RAW RVAQL AEDVT+   VAS+NRGG LV VEGLRAFLP SH S+R   +E+L+GMELPLK ++VD  + +LVVSHR A    +MT L  G VV G VR +KPYGAF+DIGGVSGLLH+SQISHDHV DI A L  G  +K  ++NQ+K+KGRISLSTK LE EPGDM+ D+  V+  A++ AA YH R+EEER AA+ VADDIVS+LD+A+LDD+G+
Sbjct:   54 TKFDRMRQKWGAPAVDESK-GDMYEEFATALEGISYNFAEGDIIPGVVQQLDPNGAMIDVGAKASAVCPTVEVSIAQGVNLEDVLTLGDQREFQIIRSENADGELMLSIRRIEYSRAWARVAQLAAEDVTISGTVASVNRGGGLVTVEGLRAFLPGSHISVRREQQEDLVGMELPLKLIQVDPAEKKLVVSHRLAAAASRMTTLETGSVVTGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLTPGMEVKAFVMNQEKDKGRISLSTKVLEAEPGDMMTDAAAVFAGADDAAAAYHARVEEERVAASSVADDIVSSLDIATLDDLGL 386          
BLAST of Gvermi6562.t1 vs. uniprot
Match: L1IVV6_GUITC (Ribosomal protein S1, chloroplastic n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1IVV6_GUITC)

HSP 1 Score: 365 bits (938), Expect = 3.190e-121
Identity = 188/342 (54.97%), Postives = 252/342 (73.68%), Query Frame = 0
Query:   44 TESVSRFEKMRLRFGEPE----VSEEK------SGFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASL 375
            T   S+FEKMR ++G+P     +S+E       +GF Y+DFE A++KFD +F+ GD+  G+V Q E+ GALVDIG K+SAY    E SM +VD  E  ++I ++REFQIIS ED NGQ+++SIR++E+ARAWERV Q+QAED T+ A + SINRGG+L+  EGLR FLP SH   +   E+ +G  +PLKFLEVD  K RLVVS+RRA+VE ++ NL  G++V G+VR IKPYGAF+DIGG+SGLLH+SQISHDH+ D+   L +G  IK MI+ QDK+KGR SLSTKTLE EPGDM+R+ ++V E AEE A RYH+RL+ E++A    A ++V+ LD+ +L
Sbjct:   57 TAPTSKFEKMRFKYGKPSLERGISQEMKDAQKIAGFDYSDFESAIAKFDNTFQVGDVVVGQVVQFEQGGALVDIGGKSSAYLGAAEASMQRVDDIEMFLSIADNREFQIISGEDENGQVRLSIRKLEFARAWERVRQIQAEDCTIMAEILSINRGGALINFEGLRGFLPGSHAP-QGMTEDTVGTMIPLKFLEVDQAKNRLVVSNRRAVVETKLVNLEPGQLVTGIVRSIKPYGAFVDIGGISGLLHISQISHDHISDVSKVLQEGQEIKAMILTQDKDKGRFSLSTKTLEAEPGDMIRNPEMVKENAEETAKRYHERLQAEQQARDQAASELVAGLDLNAL 397          
BLAST of Gvermi6562.t1 vs. uniprot
Match: A0A0P4V0Q1_9CYAN (SSU ribosomal protein S1p n=12 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A0P4V0Q1_9CYAN)

HSP 1 Score: 352 bits (902), Expect = 9.290e-117
Identity = 179/317 (56.47%), Postives = 234/317 (73.82%), Query Frame = 0
Query:   68 GFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRLEEERKAAADVADDIVSTLDMASLDDIGVDPVP 384
            GFT+ DF   + K+DY F  GD+  G V  LE  GAL+DIGAK +AY P+ EMS+N++D PE  +   E REF I++ E+ +GQL +SIRRIEY RAWERV QLQAED TV ++V + NRGG+LV +EGLR F+P SH S R P+EEL+G ELPLKFLEVD E+ RLV+SHRRA+VE++M  L  GEVV G VRGIKPYGAFIDIGGVSGLLH+S+ISHDH+    +       +K MII+ D E+GRISLSTK LEPEPGDM+++ ++VY+KAEEMAA+Y + ++++ + AA  A +I   ++ A +    V+ +P
Sbjct:   10 GFTHEDFAALLDKYDYHFSPGDVVAGTVFSLEPRGALIDIGAKTAAYIPIQEMSINRIDAPEEVLQSNETREFFILADENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSLVFATNRGGALVRIEGLRGFIPGSHISTRKPKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVKNPQVVYDKAEEMAAKYRENMKQQAQGAAIPAIEIPVAVEDAPVATEEVEAIP 326          
BLAST of Gvermi6562.t1 vs. uniprot
Match: A0A7C3PDY9_9CYAN (S1 RNA-binding domain-containing protein n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PDY9_9CYAN)

HSP 1 Score: 350 bits (897), Expect = 4.640e-116
Identity = 174/285 (61.05%), Postives = 218/285 (76.49%), Query Frame = 0
Query:   68 GFTYTDFEQAMSKFDYSFENGDICTGRVSQLERNGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAFLPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGSVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQRL 352
            GFT+ DF   + K+DY F  GD+  G V  LE  GAL+DIGAK +AY P+ EMS+N+VD PE  +   E REF I++ E+ +GQL +SIRRIEY RAWERV QLQAED TV ++V + NRGG+LV +EGLR F+P SH S R P+E+L+G ELPLKFLEVD E+ RLV+SHRRA+VE++M  L  GEVV G VRGIKPYGAFIDIGGVSGLLH+S+ISHDH+    +       +K MII+ D E+GRISLSTK LEPEPGDM+++ ++VYEKAEEMAARY +++
Sbjct:   12 GFTHEDFAALLDKYDYHFSPGDVVAGTVFSLEPRGALIDIGAKTAAYIPIQEMSINRVDSPEEVLAQNETREFFILADENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSLVFATNRGGALVRIEGLRGFIPGSHISTRKPKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVKNKEVVYEKAEEMAARYREQV 296          
The following BLAST results are available for this feature:
BLAST of Gvermi6562.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH98_9FLOR1.070e-21184.5530S ribosomal protein S1 n=1 Tax=Gracilariopsis ch... [more]
R7QL07_CHOCR1.420e-20576.6130S ribosomal protein S1 n=1 Tax=Chondrus crispus ... [more]
UPI001E1D3BAF1.300e-17264.06LOW QUALITY PROTEIN: 30S ribosomal protein S1-like... [more]
A0A7S1TIC8_9RHOD9.640e-14262.87Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NTC5_PORUM8.680e-12955.44Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z972_PORPP8.030e-12755.9530S ribosomal protein S1 n=1 Tax=Porphyridium purp... [more]
A0A1X6NLP1_PORUM6.020e-12558.38Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
L1IVV6_GUITC3.190e-12154.97Ribosomal protein S1, chloroplastic n=2 Tax=Gemini... [more]
A0A0P4V0Q1_9CYAN9.290e-11756.47SSU ribosomal protein S1p n=12 Tax=Cyanobacteria/M... [more]
A0A7C3PDY9_9CYAN4.640e-11661.05S1 RNA-binding domain-containing protein n=1 Tax=O... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 338..358
NoneNo IPR availableGENE3D2.40.50.140coord: 250..329
e-value: 3.5E-21
score: 76.9
NoneNo IPR availableGENE3D2.40.50.140coord: 71..169
e-value: 3.2E-17
score: 64.1
coord: 170..249
e-value: 1.8E-6
score: 29.6
NoneNo IPR availablePANTHERPTHR10724:SF1130S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 65..362
NoneNo IPR availablePANTHERPTHR1072430S RIBOSOMAL PROTEIN S1coord: 65..362
NoneNo IPR availableCDDcd05687S1_RPS1_repeat_ec1_hs1coord: 88..157
e-value: 4.72097E-13
score: 61.7763
NoneNo IPR availableCDDcd04465S1_RPS1_repeat_ec2_hs2coord: 175..239
e-value: 7.21997E-18
score: 75.1879
IPR035104Ribosomal protein S1-likePRINTSPR00681RIBOSOMALS1coord: 196..213
score: 47.62
coord: 88..106
score: 36.09
coord: 178..194
score: 24.37
coord: 106..120
score: 34.29
coord: 154..173
score: 21.43
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 86..157
e-value: 2.7E-11
score: 53.5
coord: 251..321
e-value: 3.4E-22
score: 89.8
coord: 173..239
e-value: 5.2E-7
score: 39.3
IPR003029S1 domainPFAMPF00575S1coord: 175..239
e-value: 4.5E-6
score: 26.9
coord: 85..157
e-value: 9.3E-10
score: 38.7
coord: 252..321
e-value: 4.2E-14
score: 52.7
IPR003029S1 domainPROSITEPS50126S1coord: 253..321
score: 20.133631
IPR003029S1 domainPROSITEPS50126S1coord: 175..239
score: 11.584164
IPR003029S1 domainPROSITEPS50126S1coord: 88..157
score: 15.746405
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 252..332
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 78..182
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 171..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1338284..1339450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6562.t1Gvermi6562.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1338284..1339450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6562.t1 ID=Gvermi6562.t1|Name=Gvermi6562.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=389bp
MAFVTSFYGTAVAPSKQSTSLRRSCARKPSPRTRMVVIARVPKTESVSRF
EKMRLRFGEPEVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLER
NGALVDIGAKASAYCPLVEMSMNKVDKPEHAVTIGEDREFQIISREDANG
QLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGSLVLVEGLRAF
LPSSHTSIRSPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNL
VAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAALPDGS
VIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKLVYEKAEEMAARYHQ
RLEEERKAAADVADDIVSTLDMASLDDIGVDPVPAEAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035104Ribosomal_protein_S1-like
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold