Gvermi6508.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6508.t1 vs. uniprot
Match: A0A2V3IMJ4_9FLOR (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMJ4_9FLOR) HSP 1 Score: 392 bits (1006), Expect = 1.780e-134 Identity = 192/300 (64.00%), Postives = 238/300 (79.33%), Query Frame = 0
Query: 5 SAFCAPLSLTPLRHR---LAPRRRTPRCAALSSPATKSILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLDHSVFHSSTARLGYSGTATFSRLRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLSWDRAFRKHVRNMRA-RGKPLLVVGDLNVARAALDVYDERRVRGRAGYADAERASFEDTLESCGMVDLFRALHPRRRAFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPLLIELTDGIL 300
+AFCAPLS LR+R +AP TP + TK +LSWNVNGLRAL R +PRAL+ LVH Y+P +VCLQETKIQ HE LF ALPG + + +SST+RLGYSGTATFSRL V + QR+INH + D+EGR VMIEYP L +INVY+VNSG +L+RLP R++WD++ RK +R +R RGKP+LV+GDLNVAR +DVY+ RV+GRAGY D ER SFEDTLE+CG+VD+FR +HP +R FT+WDY+S AR+R+HGWRIDYAL SDDMLPAV+ V +LDHV GSDHCP+LIE+T+GIL
Sbjct: 6 NAFCAPLSTPDLRNRTTYVAPTMCTPS----THTNTKKLLSWNVNGLRALLRKDPRALSDLVHQYDPDIVCLQETKIQTKHEKLFKNALPGYEALICNSSTSRLGYSGTATFSRLPVDIFQRQINHGLCDDEGRFVMIEYPSLSVINVYSVNSGQSLKRLPIRMTWDQSLRKMIRLIRRNRGKPVLVLGDLNVARHEIDVYNAERVQGRAGYTDLERRSFEDTLETCGLVDVFRTMHPDKRVFTYWDYKSNARQRNHGWRIDYALVSDDMLPAVRDVHILDHVTGSDHCPVLIEVTNGIL 301
BLAST of Gvermi6508.t1 vs. uniprot
Match: R7QKP0_CHOCR (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKP0_CHOCR) HSP 1 Score: 321 bits (823), Expect = 1.310e-106 Identity = 151/276 (54.71%), Postives = 199/276 (72.10%), Query Frame = 0
Query: 26 TPRCAALSSPATKSILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLDHSVFHSSTARLGYSGTATFSRLRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLSWDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVYDERRVRGRAGYADAERASFEDTLESCGMVDLFRALHP-RRRAFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPLLIELTDGIL 300
+PRC + S ++WNVN LRAL R NP AL LV +NP ++CLQETK+Q+ HE LFA AL G + SVFHSS ARLGYSGTA F++ +Q I H GD EGR+V +EYP ++NVYT+N+G +RL QR++WD AFR++VRN+R GKP++V+GDLNVAR +DV+ + + G++D ER SFEDTLE CG+VD +R L+P + +T WDY+S AR+R+ GWRIDYAL +DDM+ AVK V +LDHV GSDHCP+ I+ T G+L
Sbjct: 30 SPRCCTSLAGTHSSAITWNVNSLRALMRKNPNALQDLVEEHNPDILCLQETKLQEIHEGLFADALQGYESSVFHSSRARLGYSGTAVFAKREPQCVQFNIRHEDGDLEGRVVCLEYPGAIVVNVYTMNAGQNFKRLDQRMTWDSAFRRYVRNLRREGKPVIVLGDLNVARDPVDVHSPKTAKRLPGFSDEERQSFEDTLEVCGLVDAYRMLYPDEKEKYTFWDYKSRARDRNMGWRIDYALVTDDMVRAVKDVHILDHVEGSDHCPVSIQFTPGLL 305
BLAST of Gvermi6508.t1 vs. uniprot
Match: A0A8A7W726_9BACT (Exodeoxyribonuclease III n=1 Tax=Akkermansiaceae bacterium TaxID=2562705 RepID=A0A8A7W726_9BACT) HSP 1 Score: 201 bits (512), Expect = 2.410e-60 Identity = 111/253 (43.87%), Postives = 151/253 (59.68%), Query Frame = 0
Query: 40 ILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLDHSVFHSSTARLGYSGTATFSRLRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLSWDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVYDERRVRGRAGYADAERASFEDTLESCGMVDLFRALHP-RRRAFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPL 291
++SWNVNG+RA + L + NP ++CLQETK ++ L L + + +S + GYSGTA F++ A D+EGR++ +EYP L+NVYTVN+ LRRLP RL WD AFRKH+ + A KP++ GDLNVA +D+ R R AG++D ERASF + LES G +D FR L+P R A++ W YR GARER+ GWRIDY S ++ + T+ HV GSDHCP+
Sbjct: 3 LISWNVNGIRAALN---KGLADFLSAENPDILCLQETKAREEQVEL---PLEFGAYKSYWNSAEKPGYSGTAIFTKAAPLSCTHGFGIAEHDKEGRVITLEYPDFHLVNVYTVNAQDELRRLPYRLQWDAAFRKHLITL-AETKPVIFCGDLNVAHKEIDLARPRENRKSAGFSDEERASFTELLES-GFIDSFRHLYPDRTEAYSWWSYRGGARERNVGWRIDYFGLSPALIDRLAEATIHPHVLGSDHCPV 247
BLAST of Gvermi6508.t1 vs. uniprot
Match: A4S9S0_OSTLU (DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S9S0_OSTLU) HSP 1 Score: 200 bits (509), Expect = 1.280e-59 Identity = 111/266 (41.73%), Postives = 153/266 (57.52%), Query Frame = 0
Query: 39 SILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGA------LPGLDHSVFHSSTARLGYSGTATFSR-----LRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLS-WDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVYDERRVRGR-AGYADAERASFEDTLESCGMVDLFRALHPRRRAFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPL 291
S++SWNVNGLR+L + PRAL L + V+ LQETK+ G L + +STAR GYSGTA F R V +++ D+EGR++ E F++N Y NSGA L+RLP+R+ W+RA R+HVR + +RGK ++ GDLNVA +D++ + AG+ ERA+ LE C +VD FRA P RAFT+W YR+GARE++ GWR+DY LAS + ++ L V GSDHCP+
Sbjct: 2 SVVSWNVNGLRSLLKKAPRALDELARRTDADVLVLQETKLGADGRGAVDGEGEAPKFLREYGTREYATSTARKGYSGTAMFIRDGDWAKMKRVEATRLSAGGFDDEGRVLTAELDSCFVVNAYVPNSGADLKRLPERVEVWERAIREHVRALESRGKAVIYCGDLNVAHEEIDLWGRHAENSKSAGFTPEERAAMTRLLEECDLVDTFRAHRPDARAFTYWSYRAGAREKNRGWRLDYILASRRLADSIVDAYALPDVLGSDHCPV 267
BLAST of Gvermi6508.t1 vs. uniprot
Match: A9UXM6_MONBE (DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXM6_MONBE) HSP 1 Score: 199 bits (507), Expect = 1.900e-59 Identity = 116/261 (44.44%), Postives = 158/261 (60.54%), Query Frame = 0
Query: 40 ILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLDHSVFHSSTARLGYSGTA---TFSRLRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLS-WDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVYDERRVRGRAGYADAERASFEDTLESCGMVDLFRALHPRRR-AFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPLLIEL 295
++SWNVNGLRA+ +N+P+AL LV NP ++ LQETK+Q H + +A LPG ++ S A+ GYSGTA S R +Q I A D+EGR + +E P LF+I VY NSG L+RL RL+ W+ F ++R + A KP+LVVGDLNVA LD+Y+ + AG ER +F + L+ G D FR L+P AFT+W R+G R+ G R+DYA+ S+ +L A + LD V GSDHCP+ I L
Sbjct: 3 VVSWNVNGLRAVLKNHPKALPDLVQAENPDLLFLQETKLQASHVADYANLLPGYT-GLWSCSRAKKGYSGTAGATPTSDFRALSVQYGIKSAHHDQEGRTITVELPDLFVIGVYVPNSGQDLKRLDYRLNEWNVDFLAYIRELEA-SKPVLVVGDLNVAHLDLDIYNAGHLVKSAGCTPQERTAFTEFLDQ-GFTDTFRKLYPEHTGAFTYWSARTGGRQDSKGLRLDYAVCSNALLEANSPLRCLDSVMGSDHCPIAIVL 260
BLAST of Gvermi6508.t1 vs. uniprot
Match: A0A7S3A3N2_9RHOD (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3N2_9RHOD) HSP 1 Score: 200 bits (508), Expect = 5.200e-59 Identity = 115/284 (40.49%), Postives = 168/284 (59.15%), Query Frame = 0
Query: 28 RCAALSSPATKS--------ILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLDHSVFHSSTARLGYSGTATFSRLRVHVMQRKINHAVGDE----EGRLVMIEYPCLFLINVYTVNSGAALRRLPQRL-SWDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVYDERRVRGRAGYADAERASFEDTLESCGMVDLFRALHP-RRRAFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPLLIELTD 297
R +A SP+T +L+WNV LR+L R P AL +LV + +CLQETK+Q+ H F L S ++ STAR GYSGTA F R ++V + + +GDE EGR++ I+ P +L+ YT N+G L+RL R +++ ++R + A +PLL GDLNVA +D+ + AG+ D ER+ F + ++ ++D FR L+P +RR +T+W+YR+ ARER+ GWRIDY L S ++ PAV LD V GSDHCP+++EL D
Sbjct: 25 RASAAGSPSTSGNGASKPARLLTWNVASLRSLIRKQPDALQALVDDFAVDAICLQETKLQESHVPEFTDILEHYQ-SFWYCSTARKGYSGTAIFLRNDLNV--EDVRYGIGDESADAEGRVITIKLPKSYLVTCYTPNAGTGLKRLDYRTQTFEGKMTDYLRKL-ASERPLLYCGDLNVAHEPIDLANPEGNSRSAGFTDEERSCFRELIKDGELLDTFRMLYPEKRRKYTYWNYRTRARERNAGWRIDYFLVSKEVKPAVGDCVHLDGVLGSDHCPVMLELND 304
BLAST of Gvermi6508.t1 vs. uniprot
Match: UPI0018E82336 (exodeoxyribonuclease III n=1 Tax=Aureibaculum flavum TaxID=2795986 RepID=UPI0018E82336) HSP 1 Score: 197 bits (500), Expect = 1.580e-58 Identity = 104/257 (40.47%), Postives = 148/257 (57.59%), Query Frame = 0
Query: 40 ILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLDHSVFHSSTARLGYSGTATFSRLRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLSWDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVY-DERRVRGRAGYADAERASFEDTLESCGMVDLFRALHPRRRAFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPLLIEL 295
I+SWNVNG+RA+ + N V NP ++CLQET+ + + LP D++ F ++ + GYSGT S+ ++ +N A D EGR+ YP FLINVY NSG L RL R WD F +++ + + KP++V GD NVA ++D+ D+ AGY E ++ ++S G +D FR HP A+T W YR ARER+ GWRIDY L S +LP VKSV++ H+ GSDHCP+ +E+
Sbjct: 3 IISWNVNGIRAIVKKN---FVESVKKMNPDIICLQETRGSD--QEVEKTLLPFKDYNKFFNAADKRGYSGTTILSKPTPEFLKNNMNIAEHDVEGRIQCASYPNFFLINVYVPNSGQQLDRLAYRKKWDADFLSYLKELE-KTKPVIVCGDFNVAHQSIDLKNDKSNYNKTAGYTQVEIDGMDNYIKS-GFIDTFRYFHPNEVAYTFWSYRFKARERNTGWRIDYFLVSKSLLPRVKSVSIYSHIMGSDHCPIGLEI 252
BLAST of Gvermi6508.t1 vs. uniprot
Match: A0A7C6DHF7_9FIRM (Exodeoxyribonuclease III n=1 Tax=Fastidiosipila sp. TaxID=1938886 RepID=A0A7C6DHF7_9FIRM) HSP 1 Score: 197 bits (500), Expect = 1.730e-58 Identity = 109/255 (42.75%), Postives = 160/255 (62.75%), Query Frame = 0
Query: 42 SWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLDHSVFHSSTARLGYSGTATFSRLRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLSWDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVYDERRVRGRAGYADAERASFEDTLESCGMVDLFRALHPR-RRAFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPLLIEL 295
SWNVNGLRA+ R + +H P ++CLQE K Q+ + + A P + V+ +S R GYSGT T ++ + + + I V D EGR++ +E+P +L+NVY+ NS LRRL +R+ ++ FRK++ +++A+ KP++V GDLNVA +D+ + R AG++D ER F L+S G VD FR +P A++ W YR+ ARER+ GWRIDY L S D+LPAVKS ++L V GSDHCP+ + L
Sbjct: 5 SWNVNGLRAILRKGFKQ--EYLHVEKPDILCLQEIKAQK--DQVEADFSP---YYVYGNSAERKGYSGTLTLTKEKPLSVSKGIGEDVFDSEGRVLNLEFPNFYLVNVYSPNSQDLLRRLDERMVFEDLFRKYLNDLKAK-KPVIVCGDLNVAHKEIDLKNPSTNRRSAGFSDEEREKFTQLLDS-GFVDTFRHFYPDVEDAYSWWSYRTRARERNAGWRIDYFLTSPDLLPAVKSASILSDVMGSDHCPVELVL 250
BLAST of Gvermi6508.t1 vs. uniprot
Match: UPI00082C477A (exodeoxyribonuclease III n=1 Tax=Muricauda sp. CP2A TaxID=1848189 RepID=UPI00082C477A) HSP 1 Score: 195 bits (496), Expect = 6.510e-58 Identity = 107/253 (42.29%), Postives = 148/253 (58.50%), Query Frame = 0
Query: 40 ILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLDHSVFHSSTARLGYSGTATFSRLRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLSWDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVY-DERRVRGRAGYADAERASFEDTLESCGMVDLFRALHPRRRAFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPL 291
ILSWNVNG+RA+ + + + +P V+C+QETK Q H L D+S+F +S + GYSGTA S+ ++ + + D EGR+ EY FL+NVY NSG L RL R +WD F +++ + A KP++V GD NVA A+D+ D+ AGY E ++ L+S G VD FR LHP A+T+W YR ARER+ GWRIDY L S ++ V+SVT+L +V GSDHCP+
Sbjct: 3 ILSWNVNGIRAIGK---KGFLENIKNLDPDVLCIQETKAQDHEAEKELSKLT--DYSIFTNSADKKGYSGTALLSKKEPITVKNDMGNPEHDAEGRIQCAEYDDFFLVNVYVPNSGQQLDRLDYRKTWDADFLEYLNTLEA-SKPVIVCGDFNVAHRAMDLKNDKSNYNKTAGYTQVEIDGMDNFLDS-GFVDSFRKLHPDEVAYTYWSYRFKARERNTGWRIDYFLVSPKLMDKVESVTILSNVYGSDHCPI 248
BLAST of Gvermi6508.t1 vs. uniprot
Match: UPI0019030FD3 (exodeoxyribonuclease III n=1 Tax=Luteolibacter pohnpeiensis TaxID=454153 RepID=UPI0019030FD3) HSP 1 Score: 195 bits (495), Expect = 8.660e-58 Identity = 111/258 (43.02%), Postives = 149/258 (57.75%), Query Frame = 0
Query: 40 ILSWNVNGLRALTRNNPRALTSLVHTYNPHVVCLQETKIQQHHESLFAGALPGLD-HSVFHSSTARLGYSGTATFSRLRVHVMQRKINHAVGDEEGRLVMIEYPCLFLINVYTVNSGAALRRLPQRLSWDRAFRKHVRNMRARGKPLLVVGDLNVARAALDVYDERRVRGRAGYADAERASFEDTLESCGMVDLFRALHPRRR-AFTHWDYRSGARERDHGWRIDYALASDDMLPAVKSVTVLDHVRGSDHCPLLIEL 295
+LSWNVNG+RA+ + V P ++CLQETK + + P LD + F +S + GYSG A F+R +Q + D+EGR++ +EYP L+NVYT NS LRRLP R+ WD FR+H+ A KP++ GDLNVA +D+ + R AG++D ERA F L+S G D FR LHP R A++ W YR GAR R+ GWRIDY S ++ +KS +L HV GSDHCP+ I L
Sbjct: 3 LLSWNVNGMRAVLG---KGFGDFVSAEQPDILCLQETKARPEQVPM----PPELDGYHAFWNSAQKPGYSGVAVFTRSEPIEVQEGMGFEDHDKEGRVLTLEYPDFILVNVYTPNSQDGLRRLPYRMEWDEVFRQHLMTQ-ALKKPVIFCGDLNVAHQEIDLARPKDNRMSAGFSDEERAGFGKLLDS-GFTDSFRHLHPETRDAYSWWSYRGGARGRNVGWRIDYFGLSTPLVDRLKSAEILPHVMGSDHCPVSITL 251 The following BLAST results are available for this feature:
BLAST of Gvermi6508.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6508.t1 ID=Gvermi6508.t1|Name=Gvermi6508.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=301bpback to top |