Gvermi6465.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6465.t1
Unique Name	Gvermi6465.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	870

Homology

[Close]

BLAST of Gvermi6465.t1 vs. uniprot
Match: A0A2V3IU07_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU07_9FLOR)

HSP 1 Score: 279 bits (713), Expect = 2.740e-84
Identity = 138/204 (67.65%), Postives = 160/204 (78.43%), Query Frame = 0

Query:    1 MDVCPPPLLQPVPPPPKHQFHPQNLNGSFDYLASPHRKQLYHRSLWRQIASAHHYLIGHARTDPRFVSNKRPLDCLEHLRPSLLVTLLPDGYVRHDSVTSALELPPSSPMAAIHSPSPDVSTSSRHPSPSPNKPSSNNKNHNITTQPRYPYDRNSKHFLRCLDLGIIPPAEDLPEMSQRFYYNGCLIADINDLRYCPSSQSKPP 204
            M  CP PLL PVPPPPK  F    LNG FD+LASPHRKQL++RSLW+Q+++A+HYL    R DPRFV NKRPLDCLEHLRPS+ VTLLPDGY+RH+   +A ELPPSSPMA + SPSPDVS SSR+P    N+P+++ KN  I   PRYPYDRNSK FLRCLDLGIIPP EDLP++SQR YY+GCLIA+INDLR  P   SK P
Sbjct:    1 MHPCPAPLLPPVPPPPKLAFDAHTLNGPFDHLASPHRKQLHNRSLWKQLSTAYHYLNACPRPDPRFVPNKRPLDCLEHLRPSIFVTLLPDGYLRHECSPNAAELPPSSPMATMQSPSPDVSASSRNPXXXXNRPANSPKNATINAMPRYPYDRNSKPFLRCLDLGIIPPLEDLPQLSQRHYYDGCLIAEINDLRNEPLPMSKSP 204

[Close]

BLAST of Gvermi6465.t1 vs. uniprot
Match: A0A5J4YIL1_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIL1_PORPP)

HSP 1 Score: 77.0 bits (188), Expect = 1.280e-10
Identity = 46/129 (35.66%), Postives = 70/129 (54.26%), Query Frame = 0

Query:   74 DCLEHLRPSLLVTLLPDGYVRHDSVTSALELPPSSPM--------AAIHSPSPDVSTSSRHPSPSPNKPSSNNKNHNITTQPRYPYDRNSKHFLRCLDLGIIPPAEDLPEMSQRFYYNGCLIADINDLR 194
            D L+ ++PS+ + L PDGY + D   S+ +    +P         AA+ +PS  VS   + PS       +    HN+    ++PY+R S+ FL CL+LG++PP  DLP  + R Y NGCL+ +I D R
Sbjct:  282 DVLQSVKPSMFIYLYPDGYRKVDGSVSSAKAASGAPANGSAPSMAAAMSNPSSPVSLV-KSPSTGALPGGAELSTHNL----KFPYNRQSRDFLTCLELGVMPPERDLPPAASRTYVNGCLVVEILDFR 405

[Close]

BLAST of Gvermi6465.t1 vs. uniprot
Match: M2XXU5_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXU5_GALSU)

HSP 1 Score: 70.5 bits (171), Expect = 1.110e-8
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0

Query:  149 YPYDRNSKHFLRCLDLGIIPPAEDLPEMSQRFYYNGCLIADINDLR-----YCPSSQSKPPPSN--VFRVLLRPDMASLYQDLEQET 228
            +PYD +SK  ++ LDLG+IPP EDLP      YY GCLIA+I D R     +  +S      S+   ++++LRPD  ++  D+++ T
Sbjct:  218 FPYDHHSKRLIQALDLGLIPPYEDLPTNHSFHYYQGCLIAEIRDFRSNFQGFLQTSMKSSNKSSPVTYKLILRPDFYNILSDIDRAT 304

The following BLAST results are available for this feature:

BLAST of Gvermi6465.t1 vs. uniprot

BLAST of Gvermi6465.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2V3IU07_9FLOR	2.740e-84	67.65	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A5J4YIL1_PORPP	1.280e-10	35.66	Uncharacterized protein n=1 Tax=Porphyridium purpu...	[more]
M2XXU5_GALSU	1.110e-8	39.08	Uncharacterized protein n=1 Tax=Galdieria sulphura...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 643..675
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 633..709
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 835..869
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 647..706
None	No IPR available	PANTHER	PTHR10649:SF12	SPINELESS, ISOFORM C	coord: 565..690
IPR039091	Aryl hydrocarbon receptor/Aryl hydrocarbon receptor repressor	PANTHER	PTHR10649	ARYL HYDROCARBON RECEPTOR	coord: 565..690

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_88	contig	ScGOVlb_88:838247..840856 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6465.t1	Gvermi6465.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_88 838247..840856 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6465.t1 ID=Gvermi6465.t1|Name=Gvermi6465.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=870bp
MDVCPPPLLQPVPPPPKHQFHPQNLNGSFDYLASPHRKQLYHRSLWRQIA
SAHHYLIGHARTDPRFVSNKRPLDCLEHLRPSLLVTLLPDGYVRHDSVTS
ALELPPSSPMAAIHSPSPDVSTSSRHPSPSPNKPSSNNKNHNITTQPRYP
YDRNSKHFLRCLDLGIIPPAEDLPEMSQRFYYNGCLIADINDLRYCPSSQ
SKPPPSNVFRVLLRPDMASLYQDLEQETASLDPAVARAVERIIINATSGY
LNLCPRPLLTSYIRDGSVHKLTHVFNIIRKPRRQSVRRPPGFARVPHPTS
TAALLLISAAEKQQTIQRYMSLAKRATASELSTVTTKQSSYITPAPNPTS
ILNHSAPRPKSEPNVANGISIKPGEPQAVTNRNPNKPARPWRFIIPSKRL
LQNANQQALKSKKAVGLSSRPYFHPQYLTSILNPERVRTVRFTLPDPDVA
ADFKRAKAMWESAALLGGHVLEKAKDELRLQNTEINKGGIPEMVVQMLRS
VQGSLEVIYVMSATGDKKRDYYRTVIANVAEGHFLIDQVKAVVCREGYVC
TQDYSQEEIIQFQKQKRMNQNNPNRQATAAGLNANAQYPQVSRPTFSANT
AKQLQEQLANGLGAKVVGDVKSNPMVDALQAPGRDAHAKVRLLKESQKQR
TQQMQKRMQQQQQHQQHQQEQLRQQHQHQILKEQFQRQSQLHPALQLQQI
TSRSRPQMGPVGRMDKNGINIHRPAGSLSNQLQTMVSKGPGQTPTNAQIS
QGLIGSIGTHNPNMGNMGISNTISPSQLFPPQQLQQLQQHLRQQQLQQRG
AMGQISQATNSYGRGANLNTFIARNFPPNGLAGAWSPGTGFRGAAGSDGG
RLPPQFTENIEAPPHLGKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039091	AHR/AHRR