Gvermi6410.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6410.t1
Unique NameGvermi6410.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length299
Homology
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A2V3IVA3_9FLOR (Ankyrin repeat, bromo and BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA3_9FLOR)

HSP 1 Score: 331 bits (849), Expect = 1.520e-108
Identity = 192/378 (50.79%), Postives = 230/378 (60.85%), Query Frame = 0
Query:    1 MLLELLDKPECQDFSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRLLDDVNAQIAENEAHVARERDKERREMERKRENXXXXXXXXXXXXXXXXXXXXXXXXALEK--------------------------------------------------------------------------------GMEKKRGRKSAVVMELEVQHDDLMKRRKAMVEMCVELNKMKQIELSVEEKHAVCEQVGRLDFVRMKAVVDMIARGMNRMELLNEVSLEMDINEIDNKVLRDIQFFLRNPAAHTAKDALRHIEAKITDIETRLVEIRYQKVG 298
            ML EL+   EC DF EPVLTLWS  DVPGYLDKIK PMDLGTV++HMQ  +YI+HD+K+  + FD KAMA+D+RL+F NCMEYNEPSS LY TAK+ L+D+N+QI ENEAH+ RE++KER         XXXXX                   ALEK                                                                                GMEKKRGRKSAVVMELEVQHDDLMKRRKA++E   EL KMK IE+S EEK  +C  VG+LDFVRMKAVVD+I  GM R +LL++V +++++N+I+  VLR+IQFFL+NPAAHTA+DALRHIE KITDIETRLVEIRYQK+ 
Sbjct:   74 MLFELMQNAECTDFLEPVLTLWSPQDVPGYLDKIKHPMDLGTVKKHMQNGKYILHDKKTDGYSFDSKAMAKDLRLIFQNCMEYNEPSSPLYNTAKKQLEDINSQILENEAHINREKEKERXXXXXXXXXXXXXXKAAEEEAALAASQAKKAALALEKAKXXXXXXXXXXXXELKRKDAEWAARLKQEKARAVQEALDELLAKQRRDRRGSVVNTSSVSSDDNDGGIGEVSFTFVSTEGMEKKRGRKSAVVMELEVQHDDLMKRRKAILERAAELEKMKSIEMSFEEKRELCNMVGQLDFVRMKAVVDIIVNGMGRADLLHDVEVDLEVNKINKDVLREIQFFLQNPAAHTARDALRHIELKITDIETRLVEIRYQKIS 451          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A7S3A8U2_9RHOD (Hypothetical protein (Fragment) n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8U2_9RHOD)

HSP 1 Score: 80.5 bits (197), Expect = 3.360e-13
Identity = 62/282 (21.99%), Postives = 119/282 (42.20%), Query Frame = 0
Query:   14 FSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFG--FDCKAMARDVRLVFHNCMEYNEPSSALYATAKRLLDDVNAQIAE----------------NEAHVARERDKERREMERKRENXXXXXXXXXXXXXXXXXXXXXXXXALEKGMEKKRGRKSAVVMELEVQHDDLMKRRKAMVEM------------CVELNKMKQIELSVEEKHAVCEQVGRLDFVRMKAVVDMIARGMNRMELLNEVSLEMDINEIDNKVLRDIQFFLRN 265
            FS+PV  LW    +PGY D +K+PMDLGTV R M+   Y     +SG  G  F+ +  A D+RL+F N + YN     ++  AK LL  +  ++ E                N++    +R   +     K+ +                          +   E           ++E + + + ++   +  M             +    M  + +S EEK  + E + +L   ++  +++++A+   + E+  +  +E+DI+ +DNK LR+++ F+ +
Sbjct:  238 FSKPVTELWKPEAIPGYHDIVKKPMDLGTVMRKMESGAYGHEYTQSGKQGDNFNVEMWAEDMRLIFSNAISYNRAGDQIHDAAKSLLAKLEQKLFEMPGKGEENVTKKGSPKNKSGKGADRKHSKHSHHHKKRSHRAADGEDAGKTKPKRQRSQKAVSKADADEESAEDETERTARDVERKLEXVQRQMSILRAMSSPLASPRTPTYAIHAAAMYHVPMSYEEKRKLGENINKLPGEKLGKLIEIVAKRTGKAEMNKDEEIELDIDAMDNKTLREMEAFVNS 519          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A7S0BSZ3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSZ3_9RHOD)

HSP 1 Score: 76.6 bits (187), Expect = 5.740e-12
Identity = 64/283 (22.61%), Postives = 119/283 (42.05%), Query Frame = 0
Query:   14 FSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSG---TFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRLLDDVNAQIAE----NEAHVAR------------ERDKERREMERKRENXXXXXXXXXXXXXXXXXXXXXXXXALEKGMEKKRGRKSAVVMELEVQHDDLMKRRKAMVEM------------CVELNKMKQIELSVEEKHAVCEQVGRLDFVRMKAVVDMIARGMNRMELLNEVSLEMDINEIDNKVLRDIQFFLRN 265
            FS+PV  LW    +PGY D +K+PMDLGTV R M+   Y  HD   G      F+ +  A D+RL+F N + YN     ++  AK LL  +  ++ E     E + +R            +R   +     K+ +                          E   E           ++E + ++  ++   +  M             +    M  + +S EEK  + E + +L   ++  +++++A+   + E+  +  +E+DI+ +DNK LR+++ F+ +
Sbjct:  181 FSKPVTELWKPEAIPGYNDVVKKPMDLGTVLRKMESGAY-GHDYTQGGKQVDEFNVEMWAVDMRLIFSNAISYNRSGDQIHDAAKSLLARLEQKLFEMPDKGEENASRKGSPKKKSGKGADRKHSKHSHHHKKRSHRAADGEEAGKTKPKRQRSQKAVSKAEADDESAEDETERTARDVERKLEEAQRQMSILRAMSSPLASPRTPSYAIHAAAMYHVPMSYEEKRRLGENINKLPGEKLGKLIEIVAKRTGKAEMNKDEEIELDIDAMDNKTLREMEAFVNS 462          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A2V3JC81_9FLOR (Bromodomain-containing factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JC81_9FLOR)

HSP 1 Score: 67.4 bits (163), Expect = 4.010e-9
Identity = 66/304 (21.71%), Postives = 133/304 (43.75%), Query Frame = 0
Query:    4 ELLDKPECQDFSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRLLDDVNAQIAENEAHVARERDKERREMERKRENXXXXXXXXXXXXXXXXXXXXXXXXALEKGMEKKRGRKSAVVMELEVQHDD------------LMKRRKAMVE-MCVELNKMKQIELSVEEKHAVCEQVGRLDFVRMKAVVDMIARGMN-RMELLNEVSLE---MDINEIDNKVLRDIQFFLR-NPAAHTAKDALRHIEAKITDIETRL 289
            E+LD      FS+PV  LW    +  Y +KIK+PMDLGTV++ +    Y   D  +G F  +     +++RLVF N MEYN+  + L   A + +  ++ ++A                      +                        A     ++K+G++      +  +H+D              +++KA  E +  E+   + I L+ +E   + ++V +L +   + VV ++ + ++  +E ++E   E   ++ + ++  +LRDI+  +R +PA    + A+   E +I + + +L
Sbjct:   44 EVLDDEHALSFSKPVDELWEPAVLTDYFEKIKRPMDLGTVQKTLNNNGY---DDDAGRF--NPNLFRKEIRLVFLNAMEYNQRGTDLNRLANKFIHHIDTKLA----------------------SIPVPSPNKPSDDQNGNSSPLSDTPASASRNDRKKGKEXXXXXXMSNEHEDDSAVETLKSQIAAFEKKKAKSEAVLAEMELKRNIPLTFDESSKLRDEVEKLPWETAQKVVGILRKYVDDALEQMSEEDPEFVTLEFSTVEPTLLRDIESLVRPDPAKERERRAIEQYEEEIANAKRKL 320          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A1X6NZZ6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZZ6_PORUM)

HSP 1 Score: 68.2 bits (165), Expect = 4.400e-9
Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:    4 ELLDKPECQDFSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFGFDCKAMAR---DVRLVFHNCMEYNEPSSALYATAKRLLDD 100
            ELL  P+ + FS PV  LW    +P Y   +KQPMDLGTV+R ++   Y   D      G    A++R   D+  VF N M YN P  +LY  A  L D+
Sbjct:  467 ELLRHPQAKPFSAPVNELWPPESIPNYFVIVKQPMDLGTVKRTLEAGGYCSFDPTDVAAG-RMLALSRFESDILQVFTNAMLYNRPGDSLYQCAFSLRDE 565          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A835YD59_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YD59_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 9.290e-9
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 0
Query:    1 MLLELLDKPECQDFSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRLLDDVN 102
            ML  LL  P    F+EPV    + H++PGYL+ +++P+DLGT+  ++Q  RY               AM  DVR V+ NC  YN+P+SA+ A A+   +  N
Sbjct: 2109 MLRSLLSDPRAAWFAEPV----NVHELPGYLEVVQKPIDLGTIVANLQAGRYSP---------LGPAAMLEDVRTVWANCRRYNQPASAIVADAEHCRNTFN 2197          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A6I9UE18_SESIN (transcription factor GTE9-like isoform X1 n=3 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UE18_SESIN)

HSP 1 Score: 63.9 bits (154), Expect = 9.790e-8
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 0
Query:    1 MLLELLDKPECQDFSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRL 97
            +L EL++ P+   FSEPV  +    ++P Y   I +PMDLGT++R ++G  Y           F  +  A DVRL F N M YN P + +++ AK+L
Sbjct:  119 VLKELMNHPDGWIFSEPVDPV--KLNIPDYFSVISEPMDLGTIKRKLEGNMY-----------FGAEEFAADVRLTFSNAMLYNPPDNRVHSCAKKL 202          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A6G0WE44_9STRA (Bromo domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE44_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.030e-7
Identity = 42/100 (42.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:    2 LLELLDKPECQD----FSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRL 97
            LL+L+D+    D    F+EPV       DV GY D I+ PMD+ T+R   Q   Y+  D           A A DVRL+F NCM YNE S+  Y  AKRL
Sbjct:  322 LLKLVDQLSKADSRKIFAEPV-----PDDVEGYRDVIRHPMDISTLRHKAQQLHYVSLD-----------AFAADVRLIFSNCMTYNEESTIYYKEAKRL 405          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A2G9HYK5_9LAMI (Bromo domain-containing protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HYK5_9LAMI)

HSP 1 Score: 62.4 bits (150), Expect = 3.010e-7
Identity = 37/97 (38.14%), Postives = 50/97 (51.55%), Query Frame = 0
Query:    1 MLLELLDKPECQDFSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRL 97
            +L EL++ P+   FSEPV  +     +P Y   I QPMDLGT+RR ++G  Y           F  +    DVRL F N M YN P   ++  AK+L
Sbjct:   96 ILKELINHPDGWIFSEPVDPV--KLKIPDYFSIIAQPMDLGTIRRKLEGNMY-----------FGAEEFVADVRLTFSNAMSYNPPGHKVHYLAKKL 179          
BLAST of Gvermi6410.t1 vs. uniprot
Match: A0A0L0DTW9_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DTW9_THETB)

HSP 1 Score: 60.1 bits (144), Expect = 3.480e-7
Identity = 36/102 (35.29%), Postives = 46/102 (45.10%), Query Frame = 0
Query:    5 LLDKPECQDFSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGERYIVHDRKSGTFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRLLDDVNAQIA 106
            L+  P+   F EPV     A  +P Y   +K PMDLGT+RR ++  RY                 A DVR VFHNC  YN+ SS + A    L +      A
Sbjct:   23 LMSHPKAGPFLEPVDA--EALGIPDYFTVVKHPMDLGTIRRKLELNRYQTEAE-----------FAADVRQVFHNCRSYNQASSEIVAHCDELAESFEKDFA 111          
The following BLAST results are available for this feature:
BLAST of Gvermi6410.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVA3_9FLOR1.520e-10850.79Ankyrin repeat, bromo and BTB domain-containing pr... [more]
A0A7S3A8U2_9RHOD3.360e-1321.99Hypothetical protein (Fragment) n=4 Tax=Rhodosorus... [more]
A0A7S0BSZ3_9RHOD5.740e-1222.61Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A2V3JC81_9FLOR4.010e-921.71Bromodomain-containing factor 1 n=1 Tax=Gracilario... [more]
A0A1X6NZZ6_PORUM4.400e-940.00Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A835YD59_9CHLO9.290e-937.25Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A6I9UE18_SESIN9.790e-837.11transcription factor GTE9-like isoform X1 n=3 Tax=... [more]
A0A6G0WE44_9STRA1.030e-742.00Bromo domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A2G9HYK5_9LAMI3.010e-738.14Bromo domain-containing protein n=1 Tax=Handroanth... [more]
A0A0L0DTW9_THETB3.480e-735.29Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..137
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 4..267
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING PROTEIN 2coord: 4..267
NoneNo IPR availableCDDcd04369Bromodomaincoord: 3..105
e-value: 9.50061E-18
score: 75.1014
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 72..91
score: 41.96
coord: 27..43
score: 49.36
IPR001487BromodomainSMARTSM00297bromo_6coord: 1..110
e-value: 2.2E-14
score: 63.8
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 3..95
e-value: 4.8E-13
score: 49.0
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 10..91
score: 14.6792
IPR038336NET domain superfamilyGENE3D1.20.1270.220coord: 195..273
e-value: 2.2E-8
score: 36.0
IPR027353NET domainPFAMPF17035BETcoord: 202..264
e-value: 1.0E-8
score: 35.2
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..141
e-value: 2.9E-25
score: 90.6
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 3..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:594126..595352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6410.t1Gvermi6410.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 594126..595352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6410.t1 ID=Gvermi6410.t1|Name=Gvermi6410.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=299bp
MLLELLDKPECQDFSEPVLTLWSAHDVPGYLDKIKQPMDLGTVRRHMQGE
RYIVHDRKSGTFGFDCKAMARDVRLVFHNCMEYNEPSSALYATAKRLLDD
VNAQIAENEAHVARERDKERREMERKRENERKRRKAAEEEAALAASQAKK
AAAALEKGMEKKRGRKSAVVMELEVQHDDLMKRRKAMVEMCVELNKMKQI
ELSVEEKHAVCEQVGRLDFVRMKAVVDMIARGMNRMELLNEVSLEMDINE
IDNKVLRDIQFFLRNPAAHTAKDALRHIEAKITDIETRLVEIRYQKVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR038336NET_sf
IPR027353NET_dom
IPR036427Bromodomain-like_sf