Gvermi6381.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6381.t1
Unique NameGvermi6381.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length475
Homology
BLAST of Gvermi6381.t1 vs. uniprot
Match: A0A2V3IRY4_9FLOR (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR)

HSP 1 Score: 734 bits (1894), Expect = 6.860e-264
Identity = 385/439 (87.70%), Postives = 419/439 (95.44%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGSISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSKQMV 439
            MLFDSLTEKM ETVRK+RGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIK+RAIG  VVPGV+PGQMLIKIMHEELT IMG DQAPLA+R+DG+PTVVLLAGLQGAGKTTAAAKLALYCLK+KRSVML+A DVYRPAAIDQLKTLG  I+V+VF++GT ADPRDI+RKGIEK   ++IDT+IVDTAGRQVIDAKLMKELKD+K I+  DETLLVVDAMTGQEAATLT++FNEE+GITGAILTKLDGDTRGGAALSVQQVSGAPIKF GVGE+VEKL+PFIPERMASRILGMGDVLTFVE+A+E+MD++EAEKMTKRMMEAKFDFNDFLKQTK+IS+MGSLAGVMKMLPGVGSISS KMAQAEAKLKLADSLIKSMT++ERTNPELLYSGGSARSR+ RISKGAGRSRDDAE+LV DF KMRDMMSRMSKQMV
Sbjct:    1 MLFDSLTEKMGETVRKLRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKERAIGAEVVPGVDPGQMLIKIMHEELTEIMGKDQAPLAKRSDGQPTVVLLAGLQGAGKTTAAAKLALYCLKDKRSVMLIAGDVYRPAAIDQLKTLGDMINVDVFSMGTDADPRDIIRKGIEKGKENKIDTLIVDTAGRQVIDAKLMKELKDVKDISKPDETLLVVDAMTGQEAATLTRSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFIGVGEKVEKLEPFIPERMASRILGMGDVLTFVERAKEQMDEREAEKMTKRMMEAKFDFNDFLKQTKMISSMGSLAGVMKMLPGVGSISSAKMAQAEAKLKLADSLIKSMTVKERTNPELLYSGGSARSRILRISKGAGRSRDDAEDLVKDFLKMRDMMSRMSKQMV 439          
BLAST of Gvermi6381.t1 vs. uniprot
Match: R7QHF1_CHOCR (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR)

HSP 1 Score: 637 bits (1643), Expect = 6.280e-226
Identity = 329/428 (76.87%), Postives = 383/428 (89.49%), Query Frame = 0
Query:   17 MRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGS-ISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSKQMVGSPD 443
            MRGVDKITEKNV GAMK VKRALLDADVNLRVVN L+KQIK RA+G  V PGVEPGQML+KIMHEELT IMG++QAPLA RTDG+PTVVLLAGLQGAGKTTAAAKLALYCLKE+RSVM++AADVYRPAAIDQLKTLG SI+V+VF +GT  +PR+IVRKG+++    +I+T+IVDTAGRQVIDAKLMKELKDIK ++ ADETLLVVDAMTGQEAATLT++FN+E+GITGAILTKLDGDTRGGAALSVQQVSG+PIKF GVGE+V+KL+PF PERMASRILGMGDVLT VEKAQ+ MD+ EAEKMT++MME KFDFNDFLKQTK++S MGSL G+MKM+PG+G  I+ +K+ +AE KLK+ADS+IKSMT QER NPELLY+  S+RSR+ RI+ G+GRS   A+ ++SDF+KMR MM RMSKQMVG PD
Sbjct:    1 MRGVDKITEKNVTGAMKDVKRALLDADVNLRVVNALLKQIKARAVGADVTPGVEPGQMLVKIMHEELTKIMGSNQAPLANRTDGEPTVVLLAGLQGAGKTTAAAKLALYCLKEERSVMMIAADVYRPAAIDQLKTLGKSIEVDVFQMGTDVNPREIVRKGLQEGKTRKINTIIVDTAGRQVIDAKLMKELKDIKSVSKADETLLVVDAMTGQEAATLTRSFNDEVGITGAILTKLDGDTRGGAALSVQQVSGSPIKFIGVGEKVQKLEPFYPERMASRILGMGDVLTIVEKAQDVMDEAEAEKMTRKMMENKFDFNDFLKQTKMLSQMGSLGGLMKMMPGIGGQINESKLKEAEVKLKVADSIIKSMTKQERGNPELLYTAPSSRSRVERIANGSGRSLAQAKNMISDFQKMRTMMQRMSKQMVGGPD 428          
BLAST of Gvermi6381.t1 vs. uniprot
Match: A0A6T5W5G4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5W5G4_9RHOD)

HSP 1 Score: 553 bits (1426), Expect = 1.400e-191
Identity = 296/461 (64.21%), Postives = 361/461 (78.31%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEK--------------------RSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGSISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSKQMVGS 441
            MLFD+L  K+ ETVRK++G D+I EKNVA AMK VKRALLDADVNLRVVN L+K+++QRA+G  V+PGV PGQ  +KI++EEL+ +MG D  PLA  T   P V+LLAGLQGAGKTTAAAKLALYC                        + V+LVAADVYRPAAI+QLKTLG  I+ EVF+LGT+  P  I ++G+E +  +  DTVIVDTAGRQVID+ LM ELK +K      ETLLVVDAMTGQEAA LT+AFN+++GI+GAILTKLDGDTRGGAALSVQQVSG PIKF GVGE VEKL+PF PERMASRILGMGDVL+FVEKAQE +++K+A +MTK+M++A+FDF+DFLKQT ++S MGS AG+MKMLPG+  I  T++A AEAKLK++ S+I+SMT  ER  P+LL S  SARSRLSRI+ GAGRS  DA  L+SDF++MR MM+RMS+ MVG+
Sbjct:   42 MLFDTLAGKLGETVRKLQGSDRINEKNVAAAMKDVKRALLDADVNLRVVNKLVKEVQQRAVGMEVLPGVTPGQQFVKIIYEELSRVMGADATPLASPTGSDPVVILLAGLQGAGKTTAAAKLALYCKAPPAPPVGADGAAQNAVVARAPAKKVLLVAADVYRPAAIEQLKTLGARIETEVFSLGTELSPEQIAKQGLEYARKNGFDTVIVDTAGRQVIDSNLMSELKRVKAAVSPSETLLVVDAMTGQEAANLTQAFNDQVGISGAILTKLDGDTRGGAALSVQQVSGKPIKFIGVGETVEKLEPFYPERMASRILGMGDVLSFVEKAQEAVEEKQAAEMTKKMLQAQFDFDDFLKQTAMMSKMGSFAGMMKMLPGMSGIDETQLASAEAKLKVSTSMIQSMTKAERRRPDLLISDRSARSRLSRIANGAGRSFTDANTLISDFQRMRTMMARMSRTMVGN 502          
BLAST of Gvermi6381.t1 vs. uniprot
Match: A0A5J4YVF1_PORPP (Signal recognition particle protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF1_PORPP)

HSP 1 Score: 550 bits (1416), Expect = 4.900e-190
Identity = 293/447 (65.55%), Postives = 357/447 (79.87%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDG--KPTVVLLAGLQGAGKTTAAAKLALYCLKEK--RSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGSISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSKQMV-GSP 442
            MLFDSL  +M ET+RK++G DK+TEKNV  ++K+V+RALLDADVNL+VVN LIK +K RA+GE V+ GV+PGQ  IKI+++EL  IMG++  PLAR+      PTV+LLAGLQGAGKTTAAAKLALYC  E   R V+L A DVYRPAAI+QLKTLG SID EVF +GT  +P  I R+ I  +  ++ DTVIVDTAGRQVID KLM ELK +K     DE LLVVDAMTGQEAA LT+AFN+ +GITGAILTKLDGDTRGGAALSV+QVSG PIKF GVGE+VEKL+PF PERMASRILGMGDVL+FVEKAQE+MD+ EA ++T++M+EAKFDF DF+KQT++I+ MGSL G+MKM+PG+  IS  ++  AE +LKLA SLI SMT  ER NP+LL    +ARSRL RI+ G+GRS  DA +L+SDF++MR MM+RM K M+ G P
Sbjct:   66 MLFDSLAGQMSETMRKLQGSDKLTEKNVESSVKEVRRALLDADVNLKVVNSLIKDVKARALGEKVLEGVKPGQQFIKIIYDELARIMGSEATPLARKDASAESPTVILLAGLQGAGKTTAAAKLALYCKSEAKPRRVLLCACDVYRPAAIEQLKTLGASIDTEVFAMGTDVEPERIAREAISYAKKNKFDTVIVDTAGRQVIDTKLMAELKRVKNSVTPDEILLVVDAMTGQEAANLTRAFNDAVGITGAILTKLDGDTRGGAALSVKQVSGRPIKFVGVGEKVEKLEPFYPERMASRILGMGDVLSFVEKAQEQMDEAEARRLTQKMVEAKFDFEDFVKQTEMITKMGSLGGMMKMIPGMAGISDAQLTAAERQLKLARSLINSMTRSERRNPDLLIKDRTARSRLQRIAAGSGRSSKDASQLISDFQRMRTMMARMGKTMMDGGP 512          
BLAST of Gvermi6381.t1 vs. uniprot
Match: K9RTX2_SYNP3 (Signal recognition particle protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RTX2_SYNP3)

HSP 1 Score: 496 bits (1277), Expect = 4.380e-170
Identity = 258/432 (59.72%), Postives = 339/432 (78.47%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGSISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSR 433
            +FD+L +++E   + +RG DKI+E N+  A+++V+RALL+ADVNL+VV   I++++QRA+G  VV GV P Q  IKI+++EL  +MG    PLA+ +   PTV+L+AGLQGAGKTTA AKLAL+  KE R+ +LVA D+YRPAAIDQL TLG  I+V VF LGT+ +P +I R+GI K     +DTVIVDTAGR  IDA +M EL DIKK    DE LLVVDAMTGQEAA LT+AF+E+IGITGAILTK+DGDTRGGAALSV+Q+SG PIKF GVGE+VE LQPF P+R+ASRILGMGDVLT VEKAQEE+D  +AE MT++++EA+FDFNDFLKQT+++  MGSL G+MK++PG+G IS+ ++ Q E++LK A+S+I SMT QER NP+LL    ++ SR  R+++G+G   +D  +LVSDF++MR MM +
Sbjct:    1 MFDALADRLESAWKSLRGQDKISETNIQDALREVRRALLEADVNLQVVKTFIEEVRQRALGAEVVAGVRPDQQFIKIVYDELVTVMGESNVPLAQASQA-PTVILMAGLQGAGKTTATAKLALHLRKENRTTLLVATDIYRPAAIDQLLTLGKQINVPVFELGTEVNPVEIARQGIAKGRELGVDTVIVDTAGRLQIDADMMAELGDIKKTVTPDEVLLVVDAMTGQEAANLTQAFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAENMTRKILEAQFDFNDFLKQTRLLKNMGSLGGIMKLIPGMGKISNEQLEQGESQLKRAESMINSMTRQERENPQLL---ANSPSRKKRVAQGSGHKLEDVAKLVSDFQRMRSMMQQ 428          
BLAST of Gvermi6381.t1 vs. uniprot
Match: UPI0016878499 (signal recognition particle protein n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI0016878499)

HSP 1 Score: 494 bits (1272), Expect = 2.040e-169
Identity = 258/435 (59.31%), Postives = 339/435 (77.93%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGSISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSK 436
            +FD+L E++E   +K+RG D+IT+ N+  A+++V+RALL+ADVNL+VV   + Q+ +RA G  VV GV P Q  IKI+++EL  +MG+   PLA+ T   PTV+L+AGLQG GKTTAAAKLAL+  K++RS MLVA DVYRPAAIDQL TLG  ++V VF LG  A+P DI R+G+E++ A+ IDTVIVDTAGR  ID  +M+EL  IKK     +TLLVVDAMTGQEAA LT+AF+++IGITGAILTKLDGDTRGGAALSV+Q+SGAPIKF GVGE+VE LQPF PERMASRILGMGDVLT VEKAQEE+D  +AEKM ++++ A+FDF DFLKQT+++  MGSL G++KM+PG+  IS  ++AQ E +LK  +++I SMT +ER NP+LL     + +R +RI++G+G    D  +LVSDF++MR+MM +M +
Sbjct:    1 MFDALAERLEGAWKKLRGQDRITQDNIQDALREVRRALLEADVNLQVVKEFVAQVSERAQGSEVVSGVRPDQQFIKIVYDELVKVMGDTNVPLAQATTA-PTVILMAGLQGTGKTTAAAKLALHLRKQERSAMLVATDVYRPAAIDQLVTLGKQVEVPVFELGRDANPVDIARQGVERARAEGIDTVIVDTAGRLQIDPAMMEELAQIKKAVQPHDTLLVVDAMTGQEAANLTRAFHDQIGITGAILTKLDGDTRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKILAAQFDFTDFLKQTRLLKNMGSLGGILKMIPGMNKISDEQLAQGETQLKRCEAMINSMTSEERRNPDLL---AKSPARRNRIARGSGYDAQDVNKLVSDFQRMRNMMQQMGQ 431          
BLAST of Gvermi6381.t1 vs. uniprot
Match: A0A2P8WK82_9CYAN (Signal recognition particle protein n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WK82_9CYAN)

HSP 1 Score: 493 bits (1268), Expect = 1.420e-168
Identity = 265/442 (59.95%), Postives = 338/442 (76.47%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGS-ISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSKQMVGSP 442
            +F++L+E+ E   +K+RG  KI+E N+  A++ V+RALL+ADVNL+VV   I  ++++A+G  V+ GV PGQ  IKI+++E+T +MG    PLA   D  PTVVL+AGLQG GKTTA+AKLAL+  KE R  MLVA DVYRPAA+DQL TLG  IDV VF LGT A+P DI R+G+EK+  D +D VIVDTAGR  ID K+M EL DIK+    DE LLVVDAMTGQEAATLT+ F++EIGITGAILTK+DGD+RGGAALSV+Q+SG PIKF GVGE+VE LQPF PERMASRILGMGDVLT VEKAQE +D  +AEK+ ++++EAKFDF+DFLKQ +++ +MGSL G+MK++PG+G+ ISS  + Q E +LK  +S+I SMT QER NPE+L SG  +R R  RI+ G+G    D  +LVSDF+KMR MM +M    +G P
Sbjct:    1 MFEALSERFESAWKKLRGQAKISESNIQEALRDVRRALLEADVNLQVVKTFIANVQEQALGAEVISGVNPGQQFIKIVNDEMTKLMGEANEPLAN-VDNPPTVVLMAGLQGTGKTTASAKLALHLRKENRRAMLVATDVYRPAAVDQLVTLGKQIDVPVFELGTDANPVDIARQGVEKAREDGLDVVIVDTAGRLQIDPKMMAELADIKQAIQPDEVLLVVDAMTGQEAATLTRTFHDEIGITGAILTKMDGDSRGGAALSVRQISGKPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEAVDIADAEKLQQKIVEAKFDFDDFLKQMRLMKSMGSLGGIMKLIPGMGNKISSDMLEQGEVQLKRVESMINSMTKQERKNPEVL-SGSPSRRR--RIATGSGHKEKDVSKLVSDFQKMRTMMQQMGSGQMGMP 438          
BLAST of Gvermi6381.t1 vs. uniprot
Match: UPI0003492262 (signal recognition particle protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=UPI0003492262)

HSP 1 Score: 492 bits (1266), Expect = 2.580e-168
Identity = 261/440 (59.32%), Postives = 339/440 (77.05%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGS-ISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSKQMVG 440
            +FD+L +++EE  +K+RG DKI+E N+  A+K+V+RALL+ADVNL+VV   I++++ +A+G  V+ GV P Q  IKI+++EL ++MG    PLA   D  PT+VL+AGLQG GKTTA+AKLAL+  K+ RS +LVA DVYRPAAIDQLKTLG  IDV VF +GT  DP +I R G+EK+  + IDTVIVDTAGR  ID  +M EL  IK+     +TLLVVDAMTGQEAATLT  F+EEIGI+GAILTKLDGDTRGGAALSV+++SGAPIKF G+GE+VE LQPF P+RMASRILGMGDVLT VEKA EE+D  +AEKM ++++ AKFDF+DFLKQT+++  MGSLAGVMK++PG+G+ +S   + + E +LK A+S+I SMT +ER+NP+LL    S+ SR  RI+ GAG    D  +LVSDF+KMR +M +M +   G
Sbjct:    1 MFDALADRLEEAWKKLRGQDKISESNIQDALKEVRRALLNADVNLQVVKDFIREVETKALGAEVISGVRPDQQFIKIVNDELVSVMGESNVPLAH-ADTAPTIVLMAGLQGTGKTTASAKLALHLRKQNRSSLLVATDVYRPAAIDQLKTLGQQIDVPVFEMGTDTDPVEIARLGVEKAKEENIDTVIVDTAGRLQIDRDMMAELAKIKETIQPHDTLLVVDAMTGQEAATLTLTFHEEIGISGAILTKLDGDTRGGAALSVRRISGAPIKFVGMGEKVEALQPFYPDRMASRILGMGDVLTLVEKAAEEVDLADAEKMQEKILSAKFDFSDFLKQTRLMKNMGSLAGVMKLIPGMGNKLSDEDLQKGETQLKRAESMINSMTAEERSNPDLL---ASSPSRRRRIATGAGYEETDVRQLVSDFQKMRSLMQQMGQGFPG 436          
BLAST of Gvermi6381.t1 vs. uniprot
Match: Q111T7_TRIEI (Signal recognition particle protein n=19 Tax=Oscillatoriales TaxID=1150 RepID=Q111T7_TRIEI)

HSP 1 Score: 491 bits (1265), Expect = 3.190e-168
Identity = 262/435 (60.23%), Postives = 329/435 (75.63%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGSISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSK 436
            +F++L +++E   +K+RG DKIT+ N+  A+ +V+RALL+ADVNL+VV G I ++  +A G  V+ GV P Q  IKI+H+EL  IMG   APLA+  D  PT+VL+AGLQG GKTTA+AKLAL+  KE RS +LVA DVYRPAAIDQL TLG  IDV VF LGT  DP +I +KG+EK+ AD ID VI+DTAGR  ID  +M EL  IK      ETLLVVDAMTGQEAATLT+ FN++IGITGAILTK+DGDTRGGAALSV+++SG PIKF GVGE+VE LQPF PERMASRILGMGDVLT VEKAQEE D  +AEKM ++++ AKFDF DFLKQT+++  MGSL G+MK++PG+  IS  K+ Q E +LK  +S+I SMT QER NPELL     + SR  RI+ G+G +  D  +LVSDF++MR +M +M +
Sbjct:    1 MFEALADRLEVAWKKLRGQDKITDSNIQQALGEVRRALLEADVNLQVVKGFIAEVSSKAKGADVLTGVRPDQQFIKIVHDELAQIMGESNAPLAK-ADQPPTIVLMAGLQGTGKTTASAKLALHLRKENRSALLVATDVYRPAAIDQLVTLGKQIDVPVFELGTDIDPVEIAQKGLEKAKADGIDIVIIDTAGRLQIDQDMMAELARIKAAVKPQETLLVVDAMTGQEAATLTRTFNDQIGITGAILTKMDGDTRGGAALSVRRISGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDIADAEKMQEKILSAKFDFTDFLKQTRLMKNMGSLGGIMKLIPGMNKISDDKLQQGETQLKRCESMINSMTRQERQNPELL---AKSPSRRRRIAGGSGYAEKDVSKLVSDFQRMRSLMQKMGQ 431          
BLAST of Gvermi6381.t1 vs. uniprot
Match: A0A1X6NS74_PORUM (SRP54 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS74_PORUM)

HSP 1 Score: 491 bits (1264), Expect = 3.320e-168
Identity = 268/423 (63.36%), Postives = 320/423 (75.65%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDGK-PTVVLLAGLQGAGKTTAAAKLALYCLKEKRS-------------------------VMLVAADVYRPAAIDQLKTLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDAKLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGVMKMLPGVGSISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGG 397
            M+F+SL EKM++TVRK+RG DK+TE N+ GA+K+V+RA+LDADVNLRVVN LI  +++RA+G+ VV GVEPGQ  IKI++EELT +MG D APL+ R  G  PTVVLLAGLQGAGKTTAAAKLALY    K                           V+LVA DVYRPAA++QL+TL   IDV+VFT        +I R+G+  +   +  TVI+DTAGRQVI+ KLM+EL+D+K     DETLLVVDAMTGQEAA LT+AFN+++GITGAILTKLDGDTRGGAALSVQ VSG PIKF G GE+VE+L+PF PERMASRILGMGDVLT V+KA+E MD KEAE +TKRM++  FDF DFLKQ+K+ISTMGS  G+MKMLPGVGSIS  +MA AE KLKLA  LI SMT  ER  P+LL SGG
Sbjct:   20 MMFESLAEKMDQTVRKLRGTDKMTEANIGGALKEVRRAMLDADVNLRVVNQLIADVRERAVGQDVVAGVEPGQQFIKIIYEELTRVMGKDAAPLSTRAAGAGPTVVLLAGLQGAGKTTAAAKLALYVKSRKAEKPSAAAALEANPPXXXXXXXGPPPKVLLVACDVYRPAAVEQLQTLAGMIDVDVFTDDLSLGAVEIARRGLAVATEGKYHTVIIDTAGRQVINDKLMRELRDVKAAAKPDETLLVVDAMTGQEAANLTRAFNDDVGITGAILTKLDGDTRGGAALSVQSVSGKPIKFVGTGEKVERLEPFFPERMASRILGMGDVLTLVDKAEEAMDAKEAEALTKRMVDNTFDFEDFLKQSKMISTMGSFGGLMKMLPGVGSISGQQMAAAEQKLKLATCLINSMTPTERKQPDLLASGG 442          
The following BLAST results are available for this feature:
BLAST of Gvermi6381.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRY4_9FLOR6.860e-26487.70Signal recognition particle protein n=1 Tax=Gracil... [more]
R7QHF1_CHOCR6.280e-22676.87Signal recognition particle SRP54 homolog ffh n=1 ... [more]
A0A6T5W5G4_9RHOD1.400e-19164.21Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YVF1_PORPP4.900e-19065.55Signal recognition particle protein n=1 Tax=Porphy... [more]
K9RTX2_SYNP34.380e-17059.72Signal recognition particle protein n=1 Tax=Synech... [more]
UPI00168784992.040e-16959.31signal recognition particle protein n=1 Tax=Leptol... [more]
A0A2P8WK82_9CYAN1.420e-16859.95Signal recognition particle protein n=1 Tax=filame... [more]
UPI00034922622.580e-16859.32signal recognition particle protein n=2 Tax=Cyanob... [more]
Q111T7_TRIEI3.190e-16860.23Signal recognition particle protein n=19 Tax=Oscil... [more]
A0A1X6NS74_PORUM3.320e-16863.36SRP54 domain-containing protein n=1 Tax=Porphyra u... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..474
NoneNo IPR availableCDDcd18539SRP_Gcoord: 103..295
e-value: 2.56061E-102
score: 302.21
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 2..87
e-value: 7.1E-27
score: 105.3
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 6..83
e-value: 7.6E-17
score: 61.3
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 101..248
e-value: 6.3E-7
score: 39.0
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 102..297
e-value: 1.4E-96
score: 336.8
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 102..297
e-value: 1.6E-72
score: 243.3
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 270..283
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 91..286
e-value: 5.6E-113
score: 378.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..355
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 312..439
e-value: 1.5E-29
score: 104.7
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 328..431
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 4..307
e-value: 5.6E-113
score: 378.8
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 328..431
e-value: 4.1E-23
score: 81.9
IPR004780Signal recognition particle proteinTIGRFAMTIGR00959TIGR00959coord: 3..432
e-value: 3.4E-159
score: 528.2
IPR004780Signal recognition particle proteinPANTHERPTHR11564:SF7SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTICcoord: 3..453
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 3..453
IPR022941Signal recognition particle, SRP54 subunitHAMAPMF_00306SRP54coord: 6..469
score: 31.733839

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:383697..385121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6381.t1Gvermi6381.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 383697..385121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6381.t1 ID=Gvermi6381.t1|Name=Gvermi6381.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=475bp
MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVN
GLIKQIKQRAIGEAVVPGVEPGQMLIKIMHEELTAIMGNDQAPLARRTDG
KPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLVAADVYRPAAIDQLK
TLGVSIDVEVFTLGTQADPRDIVRKGIEKSAADRIDTVIVDTAGRQVIDA
KLMKELKDIKKITDADETLLVVDAMTGQEAATLTKAFNEEIGITGAILTK
LDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGD
VLTFVEKAQEEMDQKEAEKMTKRMMEAKFDFNDFLKQTKVISTMGSLAGV
MKMLPGVGSISSTKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSAR
SRLSRISKGAGRSRDDAEELVSDFRKMRDMMSRMSKQMVGSPDGTPGETV
GNRSQRRKSSKKKALKKVTKRGFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013822Signal_recog_particl_SRP54_hlx
IPR003593AAA+_ATPase
IPR000897SRP54_GTPase_dom
IPR027417P-loop_NTPase
IPR036891Signal_recog_part_SRP54_M_sf
IPR042101SRP54_N_sf
IPR004125Signal_recog_particle_SRP54_M
IPR004780SRP
IPR022941SRP54