Gvermi6380.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6380.t1
Unique NameGvermi6380.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length434
Homology
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BLAST of Gvermi6380.t1 vs. uniprot
Match: A0A2V3IRZ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ4_9FLOR)

HSP 1 Score: 520 bits (1338), Expect = 7.070e-164
Identity = 265/407 (65.11%), Postives = 330/407 (81.08%), Query Frame = 0 
Query:    2 SYTEVFAIEKDVNDESYYVGNIDSNFYVAKRASSGCTFEWTSSAGSASGDDDNDENREIFYDVLKGSDGLIYAVGTTKGNFSSPEKEVPTLDAAVVVYDPSNGRLVRQAQYDVENGLDDVARAVVQKPDGNLIVAVYGSPPYVQNSPVHATRLLEISPDTLELLRIHVVEVQISGA-FSVIGGPTIIKMVYIEDQEAVVAVGQILGRGLLFLFSLSSDTVVAQTGWGETVGNIQIGGLATDNNGAFFVTGSTSEIVLENSDLEGVVHSESHPYVIRYDNLLAGEPELTWVRQLAGSGSSQSGDDVTIDSVTGEVVVIGSFSANFAVTDNLGGGGTFEVETITNDGLTDIFVWYLDAENGAFMDLR-RSFASTASEDRGNVVEVLASRRIAIGGVINDGTDENALACD 406
            SYTEVF+I K+ +D +YYVGN DSNF++AKR S  C+ +WTS+ GSA+GDDDNDENREIFYDV+ GSDGL+YA GTTKGNFS P  EVPTLDAA+VVY+ ++G LVRQAQYD+E+GLD+VARA+ +K DGNL+VAVYGS P VQN+ +  TR++E+S DTLE++ I  VEV  S + FS+  GP I   VY+E    + AVGQILGRG+LF + L+S TV++Q+ WG T+GN+Q+GGL  D+NG F+VTGS+S  VL N DLE   +SE H YVIR+DNLL+G+P  TWVRQLAGSGSSQSG+DVTID VTGEVVV+GSF A+F+VTD+     ++++ TI+ DGLTDIFVWYLD+E G F DLR  SFASTASEDR NVVEVL++R++ IGGVINDGTD+NALACD
Sbjct:   33 SYTEVFSIAKESDDSTYYVGNRDSNFFIAKRNSQ-CSPQWTSTEGSATGDDDNDENREIFYDVIIGSDGLLYAAGTTKGNFSFPANEVPTLDAAIVVYNNTDGSLVRQAQYDIESGLDNVARAIAEKADGNLLVAVYGSTPNVQNTAIFETRIIEVSHDTLEVMNISSVEVTTSDSIFSITAGPRIWDFVYVESLGVIAAVGQILGRGMLFTYDLTSGTVISQSEWGNTLGNMQVGGLVVDDNGVFYVTGSSSSNVLSNVDLEQATNSEYHTYVIRFDNLLSGQPVPTWVRQLAGSGSSQSGNDVTIDPVTGEVVVVGSFDADFSVTDSQT-AKSYDLSTISKDGLTDIFVWYLDSETGDFSDLRISSFASTASEDRANVVEVLSNRQLEIGGVINDGTDDNALACD 437
The following BLAST results are available for this feature:
BLAST of Gvermi6380.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRZ4_9FLOR7.070e-16465.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY101898NHL repeatcoord: 55..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:381005..382419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6380.t1Gvermi6380.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 381005..382419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6380.t1 ID=Gvermi6380.t1|Name=Gvermi6380.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=434bp
MSYTEVFAIEKDVNDESYYVGNIDSNFYVAKRASSGCTFEWTSSAGSASG
DDDNDENREIFYDVLKGSDGLIYAVGTTKGNFSSPEKEVPTLDAAVVVYD
PSNGRLVRQAQYDVENGLDDVARAVVQKPDGNLIVAVYGSPPYVQNSPVH
ATRLLEISPDTLELLRIHVVEVQISGAFSVIGGPTIIKMVYIEDQEAVVA
VGQILGRGLLFLFSLSSDTVVAQTGWGETVGNIQIGGLATDNNGAFFVTG
STSEIVLENSDLEGVVHSESHPYVIRYDNLLAGEPELTWVRQLAGSGSSQ
SGDDVTIDSVTGEVVVIGSFSANFAVTDNLGGGGTFEVETITNDGLTDIF
VWYLDAENGAFMDLRRSFASTASEDRGNVVEVLASRRIAIGGVINDGTDE
NALACDVGSIGDAQRDSAGEAFATVVGDNCLTI*
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