Gvermi6359.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6359.t1
Unique Name	Gvermi6359.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	318

Homology

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BLAST of Gvermi6359.t1 vs. uniprot
Match: A0A2V3IIE9_9FLOR (Muscle M-line assembly protein unc-89 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIE9_9FLOR)

HSP 1 Score: 191 bits (486), Expect = 1.280e-53
Identity = 201/484 (41.53%), Postives = 233/484 (48.14%), Query Frame = 0

Query:    1 MAAVALNNLPWWTSDADVEAFCALAHAEAQRAIAAVRFAVDPACGKSLGRVAIALSAPDLAEPLRAALAEN-----------------------------------------------------------------------PPPSASPA--------------APVTPDAERARS-----------------------------------------------------------------------HRAKGRETLIINKYGDRVLVYRPDHETDDSRRRPTSRRAPRDSSDEYE-TTAKLNIPEEVKERLRERMQNERHSQHNRSAEHSLSPRRFSPERDRXXXXXXXXXXXXXXXXXXXXXXXPFNSSSXXXXXXXS--PDWSDDHRSSKRRRHAHYESVPWDRG--------SDSPKHDDPPVKSRADEEELPPRRPRRRGGRSRKRARANGNQQGSAAVNDKADAPSDRRNSRRQRSSRR 317
            MAAVAL+NL WWT+DA+V+A    AHA A RA+  VRFA   A GKSLGRVAIALSA DLAEPLRAALA                                                                         PPP+  P                P  P+ +RA +                                                                        RA GRETL+INKYG+RVLV+RPD++ ++ RR+ TSRR  R+SSDEY+ +TAKLNIPEEVK           HS+H RS + S+SP RFSPERDR XXXXXXXXXXXXXXXXXXXXXX      XXXXXXX   P+WSDD R+SKRR                     S SPKHDD P KSR  E++ PPRR R+RGGRSR+RA +N NQQ  A+  DK+D  SDRRNSRRQRS RR
Sbjct:    1 MAAVALSNLGWWTTDAEVDALVQRAHAAAHRALTDVRFATHAASGKSLGRVAIALSAADLAEPLRAALAALHPXXXXXXADLPVVAAVLPPDHVDAFLXXXXXXSPVAAXXXXAAPRFPHHAAMPPFPPRIFPHTLPMPRGIPPPAFMPPFMWLPPNPSQQQAPRPAAPEQQRAHAPPQRQLPSPRAPSKSPSSRXXXXXXXXXSDASPPRPAPHNRRRSPRRXXXXXXXXXXXXXXXXXXXXXXXXRRAAGRETLLINKYGERVLVFRPDNDNEEVRRKSTSRRTTRESSDEYDDSTAKLNIPEEVKXXXXXXXXXXXHSRHARSPDRSVSPPRFSPERDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEWSDDRRASKRRXXXXXXXXXXXXXXXXXXXATSVSPKHDDMPSKSRPGEDDEPPRRARKRGGRSRRRAHSNANQQNCASAADKSDIQSDRRNSRRQRSGRR 484

The following BLAST results are available for this feature:

BLAST of Gvermi6359.t1 vs. uniprot

BLAST of Gvermi6359.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IIE9_9FLOR	1.280e-53	41.53	Muscle M-line assembly protein unc-89 n=1 Tax=Grac...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..317

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_88	contig	ScGOVlb_88:267037..268629 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6359.t1	Gvermi6359.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_88 267037..268629 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6359.t1 ID=Gvermi6359.t1|Name=Gvermi6359.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=318bp
MAAVALNNLPWWTSDADVEAFCALAHAEAQRAIAAVRFAVDPACGKSLGR
VAIALSAPDLAEPLRAALAENPPPSASPAAPVTPDAERARSHRAKGRETL
IINKYGDRVLVYRPDHETDDSRRRPTSRRAPRDSSDEYETTAKLNIPEEV
KERLRERMQNERHSQHNRSAEHSLSPRRFSPERDRQRDRDRGRDRHRDRR
RERARERSPFNSSSRRRSRSHSPDWSDDHRSSKRRRHAHYESVPWDRGSD
SPKHDDPPVKSRADEEELPPRRPRRRGGRSRKRARANGNQQGSAAVNDKA
DAPSDRRNSRRQRSSRR*