Gvermi6242.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6242.t1
Unique NameGvermi6242.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length271
Homology
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A2V3IV48_9FLOR (Phosphoglycolate phosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV48_9FLOR)

HSP 1 Score: 327 bits (837), Expect = 2.630e-110
Identity = 166/231 (71.86%), Postives = 192/231 (83.12%), Query Frame = 0
Query:   40 MSAAP-PALVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSIIRHMCTMANVPAQAIDAKMNCVLQHAQSVMSVDADTSYLVLPGVVNVLRALGERNVPCALTTGNMAYIADVKLRSAGLKSFFVGGAFGDECEKREDILKLAVKRCAPDVCMSRVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQPTLLFDDLSDTDGVLRALG 269
            M+A P P+LVTWDIDGTLLR+APPF N+AHK+AIN+AV+AVHG  +TVDDVPHVGNTDLSIIRHMCT ANVPA  ID +M  VL+HA+ V+ VD DTS+ VLPGV  VL  L E  VPCALTTGNMAYIAD+KL+SAGL+SFFVGGAFGDE E R DILKLAV+RCAP V M  VVHVGDAVSDV+AAK +GA S+AVATGA+ R+ LE E+P  +FDDLSDT   L+A+G
Sbjct:    1 MAATPRPSLVTWDIDGTLLRTAPPFSNQAHKNAINEAVYAVHGTRITVDDVPHVGNTDLSIIRHMCTAANVPAPQIDTEMQNVLRHAEEVIKVDGDTSHFVLPGVQKVLSVLSEYRVPCALTTGNMAYIADLKLKSAGLRSFFVGGAFGDEREDRADILKLAVQRCAPGVNMDEVVHVGDAVSDVQAAKRSGARSIAVATGAYERRKLEAEKPDFIFDDLSDTQQFLKAVG 231          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A2V3IWC4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWC4_9FLOR)

HSP 1 Score: 141 bits (356), Expect = 3.230e-39
Identity = 74/106 (69.81%), Postives = 87/106 (82.08%), Query Frame = 0
Query:  164 MAYIADVKLRSAGLKSFFVGGAFGDECEKREDILKLAVKRCAPDVCMSRVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQPTLLFDDLSDTDGVLRALG 269
            MAYIAD+KL+SAGL+SFFV GAF +E E R DILKLAV+RCAPDV M  VVHVGDAVSDV+AAK +GA S AVATGA+ R+ LE E+P  +FDDLSDT   L+A+G
Sbjct:    1 MAYIADLKLKSAGLRSFFVEGAFANEREDRADILKLAVQRCAPDVSMDEVVHVGDAVSDVQAAKRSGARSTAVATGAYERRRLEAEKPDFIFDDLSDTHRFLKAVG 106          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A7Z9Y1Z0_9CHLR (HAD family hydrolase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7Z9Y1Z0_9CHLR)

HSP 1 Score: 112 bits (279), Expect = 3.190e-26
Identity = 81/231 (35.06%), Postives = 119/231 (51.52%), Query Frame = 0
Query:   45 PALVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSIIRHMCTMANVPAQAIDAKMNCVLQ-HAQSVMSVDADTSYLVLPGVVNVLRALGER-NVPCALTTGNMAYIADVKLRSAGLK-SFFVGGAFGDECEKREDILKLAVKRCAPDVCMS----RVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQPTLLFDDLSDTDGVLRAL 268
            P L+ +DIDGTL+R+     N A ++ I  A+  + GA+  VD     G TD  II  + T   +P + ++AK+  V +  AQ    + A        GV  +L AL E  N+   L TGN    A +KL +AG+    F+ GA+G +   R ++ ++ +KR       S      V +GD  +D+R A+   A +V VA+G H    L Q QP  LFD+LSDT+ VLR L
Sbjct:    2 PKLLLFDIDGTLIRT-----NGAGRETIRFALEELFGAAGPVDTYKFSGKTDPRIIIDLMTAVGIPREEVEAKLPTVYELMAQKGQEIFAQRGMRPCTGVPELLAALREHDNIVLGLLTGNSQITAPIKLSAAGIDPDQFIVGAYGSDAMNRNELPQIGMKRAKQLTGHSFNGKNTVIIGDTPADIRCARAGQAKAVVVASGWHTADALAQYQPDHLFDNLSDTEEVLRTL 227          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A7V2HE93_9BACT (HAD family hydrolase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7V2HE93_9BACT)

HSP 1 Score: 109 bits (273), Expect = 2.410e-25
Identity = 81/223 (36.32%), Postives = 111/223 (49.78%), Query Frame = 0
Query:   45 PALVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSIIRHMCTMANVPAQAIDAKMNCVLQHAQSVMSVDADTSYL--VLPGVVNVLRALGERNVPCALTTGNMAYIADVKLRSAGLKSFFVGGAFGDECEKREDILKLAV---KRCAPDVCMSRVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQPTLLFDDLSDTD 262
            PA+V +DIDGTL+R + P     H+ A+  AV  V G   T D +P  G  DL I   M   A      I   M  +++ AQ +    +  S    V PG  + LR L  R VP  L TGN+  I   KL  AGL+ +F  GAF +    R  +L++A+   +R       +R+  +GD  +DVRAA+ N   SVAVATG      L    PT+L + L+D D
Sbjct:    9 PAVVFFDIDGTLVRKSGPH----HRQALESAVQRVTGLCATTDGIPVQGMLDLKIFEMMLRNAGATPALIARAMPDLVREAQWLYRRRSPPSLRDKVCPGARSALRRLRRRGVPLGLVTGNLTAIGWRKLERAGLRHYFQFGAFAERAGDRAGLLRVALAHARRRGWIGVRTRLWLIGDHENDVRAAQANAVNSVAVATGLSSAGDLASCSPTILLNSLTDLD 227          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A4S0Q1_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S0Q1_OSTLU)

HSP 1 Score: 109 bits (273), Expect = 3.460e-25
Identity = 79/243 (32.51%), Postives = 124/243 (51.03%), Query Frame = 0
Query:   41 SAAPPALVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVT--VDDVPHVGNTDLSIIRHMCTMANVPAQAIDAKMN-CVLQHAQSVMSVDADTS--YLVLPGVVNVLRALGERN-VPCALTTGNMAYIADVKLRSAGLKSFFVG---GAFGDECEKREDILKLAVKRCAP--DVCMSRVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVL---EQEQPTLLFDDLSDTDGVLRALG 269
            SA P  L T+D+DGTL+R++    N+ HKDA    +  V+G      +D V H G+TD+ I+  +     VP + I  +M+ C    ++  +   AD +    +L GV  +L  L  R+ V   L TGN+  I   K++  G+  FF     G FG +   R +++ +A  R      V   +  H GD  +DV+AA+  GA ++ + TG   ++ L    +    ++FDDLSDT  V+RALG
Sbjct:    5 SAVPLTLATFDVDGTLIRASGADANKFHKDAFAHGLLEVYGIDDARGIDVVQHHGSTDMLIVAAVARFHGVPEEVIYERMDECTAAMSRYAVEKKADAAEGLELLVGVRALLEKLAARDDVAVCLVTGNLEPIGWAKMQRLGIDEFFTAPRYGGFGSDHTDRGELVAIAANRTKEYLGVRAEKRFHFGDTPADVKAAEFAGATAIGLLTGIFSKEELVASSKLDDPIIFDDLSDTAAVVRALG 247          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A7C2I8T0_9BACT (HAD family hydrolase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C2I8T0_9BACT)

HSP 1 Score: 108 bits (270), Expect = 6.470e-25
Identity = 76/218 (34.86%), Postives = 113/218 (51.83%), Query Frame = 0
Query:   45 PALVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSIIRHMCTMANVPAQAIDAKMNCVLQHAQSVMSVDADTSYLVL-PGVVNVLRALGERNVPCALTTGNMAYIADVKLRSAGLKSFFVGGAFGDECEKREDILKLAVKRCAPDVCM---SRVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQPTLLFDDL 258
            PA+V +DIDGTL+R   P    +H++A+ +AV  V G   T D +P  G  D  I+  M   A      I   M  +L+ AQ + +         L PGV  +L+ L    +P  L TGN++ I   K+  AGL+ +F  GAF ++   R  + +LA+++      +   +R+  VGD  +DV AA+ N  G++AVATG   R+ L    P LL DDL
Sbjct:    9 PAVVLFDIDGTLVRRIGP----SHREALVEAVRQVTGLDTTTDGIPVQGMLDPDILTQMMRAAGARPAEIRRLMPAILEAAQELFAERCPALERKLCPGVRTLLKKLARAGIPAGLVTGNLSRIGWKKIERAGLEPYFHFGAFSEQGPTRAALARLALRQARQAGWIGRRTRIWLVGDHPNDVLAARANRIGAIAVATGLSSREELAACGPDLLLDDL 222          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A7Y5GFK1_9BACT (Haloacid dehalogenase-like hydrolase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7Y5GFK1_9BACT)

HSP 1 Score: 108 bits (269), Expect = 9.260e-25
Identity = 79/223 (35.43%), Postives = 113/223 (50.67%), Query Frame = 0
Query:   43 APPALVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSIIRHMCTMANVPAQAIDAKMNCVLQHAQSVMSVDADT-SYLVLPGVVNVLRALGERNVPCALTTGNMAYIADVKLRSAGLKSFFVGGAFGDECEKREDILKLAVKRC------APDVCMSRVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQPTLLFDDL 258
            A PA+V +DIDGTL+R A P     H+ A+ +AV  V G   T D +P  G  D  I+  M   A      I A M  V++ AQ +   +       V PG   +L+ L +R +P  L TGN+  IA  K++ A L+ FF  GAF +    R +++++A++        +P   +S V   GD  +DVRAA+ NG  S+AVATG      L    P +L  DL
Sbjct:    8 AAPAVVLFDIDGTLIRRAGPH----HRQALVEAVRVVTGLDTTTDHIPVQGMLDRDILTRMMKDAGATRLMIAASMPSVVREAQRIYVRNCPVLETKVCPGSRELLQQLLDRGIPVGLVTGNLTRIAWKKMQRARLRRFFRFGAFAEFGRSRGELVRIAIRYARRQGWISPQTLISLV---GDHENDVRAARANGIRSIAVATGLSSMAGLATASPDVLVPDL 223          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A7C2FNX7_9CHLR (HAD family hydrolase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7C2FNX7_9CHLR)

HSP 1 Score: 107 bits (268), Expect = 1.450e-24
Identity = 84/234 (35.90%), Postives = 117/234 (50.00%), Query Frame = 0
Query:   44 PPALVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSIIRHMCTMANV-----PAQAIDAKMNCVLQHAQSVMSVDADTSYLVLPGVVNVLRALGERNVPCALTTGNMAYIADVKLRSAGLKSFFVGGAFGDECEKREDILKLAVKRCAPDVCMS----RVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQPTLLFDDLSDTDGVLRAL 268
            P  LV +DID TLL +    G+RA K A  + +    G  V +D + + G TDL++I  +   A +     P  A   K+    +H    ++++  T   ++PGV  VL  L        L TGN  Y A +KL    L  +F  G FGD    R DI + AV+RC     +S    R++ VGD   DVRA +  GA +VAVATG    + L      L+F DLSD +GV+RAL
Sbjct:   10 PKLLVLFDIDQTLLHTGGA-GSRALKLAAEEVL----GRPVDLDGMLYAGRTDLALIGEILQRAGLNPDDHPDLAHAIKL-AFFRHLP--VTLEESTKGRLMPGVPQVLDLLSRNGACLGLCTGNFRYSAFLKLSHFRLADYFAEGGFGDLYPDRADIARDAVRRCFRRFSLSLPPDRIILVGDTPEDVRAGQAVGARTVAVATGIFDEEALRAAGADLVFKDLSDAEGVVRAL 235          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A7S0KP93_MICPS (Hypothetical protein n=3 Tax=Micromonas TaxID=38832 RepID=A0A7S0KP93_MICPS)

HSP 1 Score: 107 bits (267), Expect = 5.630e-24
Identity = 75/212 (35.38%), Postives = 115/212 (54.25%), Query Frame = 0
Query:   47 LVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSIIRHMCTMANVPAQAIDAKM----NCVLQHAQ-SVMSVDADTSYLVLPGVVNVLRALGERNVPC--ALTTGNMAYIADVKLRSAGLKSFFVG---GAFGDECEKREDILKLAVKRCAPDVCMSRV--VHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVL 246
            L+T+D+DGTL+++     N+ HKDA   A   VHG    +D + H G+TD  +I  +     V    I AKM    + +L +A  S  +  A T   +LPGV  +L  L ER+  C  AL TGN+  IA +K+++ G++  F     G FG +  +R  ++++A KRC   + +  V  VHVGD  +DV+AA++  A ++AV TG      L
Sbjct:   48 LITFDVDGTLIKAVGAHANKFHKDAFAHAFKIVHGLDTNIDVIAHHGSTDQLVIESVLEHHGVEHDVIWAKMPECCDAMLAYAYGSAAAGFAATGLELLPGVKELLSRLAERD-DCVVALVTGNLERIAWIKMKALGVEGLFTKPGIGGFGSDDTERGALVRIARKRCLEKLGVEVVAAVHVGDTPNDVKAAEVGDAKAIAVTTGVFDADAL 258          
BLAST of Gvermi6242.t1 vs. uniprot
Match: A0A7C6B343_9BACT (HAD family hydrolase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C6B343_9BACT)

HSP 1 Score: 105 bits (262), Expect = 1.850e-23
Identity = 81/223 (36.32%), Postives = 106/223 (47.53%), Query Frame = 0
Query:   40 MSAAPPALVTWDIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSIIRHMCTMANVPAQAIDAKM-NCVLQHAQSVMSVDADTSYLVLPGVVNVLRALGERNVPCALTTGNMAYIADVKLRSAGLKSFFVGGAFGDECEKREDILKLAVKRCAPDVCMSR---VVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQPTLLFDDL 258
            ++  PPALV +DIDGTL+R A P     H+ A+ +A+  V G   T D VP  G  D  II  M   A      I   M   V            D    V PG   +L  L  R     L TGN+  I   K+  AGL+++F  GAFG+    R  +++LA+        + R   V  +GDA +DVRAA+LN   +VAVATG  G   L   +P LL  DL
Sbjct:   37 LAGMPPALVLFDIDGTLIRRAGP----QHRLALIEAIRRVTGIETTTDHVPLHGMLDPDIITRMLRQAGAAEALIRRAMPEIVRXXXXXXXXXXPDLRRKVCPGARRLLAGLQRRGAVMGLVTGNLTRIGWKKVERAGLRAYFRLGAFGEMSRDRAGLVRLALAEARRRGWLCRRTPVSLIGDAPADVRAAQLNRVRAVAVATGVTGFDELAALKPDLLLKDL 255          
The following BLAST results are available for this feature:
BLAST of Gvermi6242.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IV48_9FLOR2.630e-11071.86Phosphoglycolate phosphatase n=1 Tax=Gracilariopsi... [more]
A0A2V3IWC4_9FLOR3.230e-3969.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7Z9Y1Z0_9CHLR3.190e-2635.06HAD family hydrolase n=1 Tax=Anaerolineae bacteriu... [more]
A0A7V2HE93_9BACT2.410e-2536.32HAD family hydrolase n=1 Tax=Bryobacteraceae bacte... [more]
A4S0Q1_OSTLU3.460e-2532.51Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A7C2I8T0_9BACT6.470e-2534.86HAD family hydrolase n=1 Tax=Bryobacteraceae bacte... [more]
A0A7Y5GFK1_9BACT9.260e-2535.43Haloacid dehalogenase-like hydrolase n=1 Tax=Bryob... [more]
A0A7C2FNX7_9CHLR1.450e-2435.90HAD family hydrolase n=1 Tax=Dehalococcoidia bacte... [more]
A0A7S0KP93_MICPS5.630e-2435.38Hypothetical protein n=3 Tax=Micromonas TaxID=3883... [more]
A0A7C6B343_9BACT1.850e-2336.32HAD family hydrolase n=1 Tax=Bryobacteraceae bacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023198Phosphoglycolate phosphatase-like, domain 2GENE3D1.10.150.240Putative phosphatase; domain 2coord: 67..133
e-value: 1.2E-45
score: 157.6
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 47..255
e-value: 1.2E-45
score: 157.6
IPR041492Haloacid dehalogenase-like hydrolasePFAMPF13419HAD_2coord: 50..236
e-value: 2.2E-9
score: 37.7
NoneNo IPR availableSFLDSFLDG01129C1.5:_HAD,_Beta-PGM,_Phosphatcoord: 48..267
e-value: 5.6E-19
score: 63.4
NoneNo IPR availableSFLDSFLDS00003Haloacid_Dehalogenasecoord: 48..267
e-value: 5.6E-19
score: 63.4
NoneNo IPR availablePANTHERPTHR43885HALOACID DEHALOGENASE-LIKE HYDROLASEcoord: 38..268
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 46..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:3547874..3548686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6242.t1Gvermi6242.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 3547874..3548686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6242.t1 ID=Gvermi6242.t1|Name=Gvermi6242.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=271bp
MPAGPAAFAATVLLSGSRSMHFGGRPLLARIGHLQVRTAMSAAPPALVTW
DIDGTLLRSAPPFGNRAHKDAINKAVFAVHGASVTVDDVPHVGNTDLSII
RHMCTMANVPAQAIDAKMNCVLQHAQSVMSVDADTSYLVLPGVVNVLRAL
GERNVPCALTTGNMAYIADVKLRSAGLKSFFVGGAFGDECEKREDILKLA
VKRCAPDVCMSRVVHVGDAVSDVRAAKLNGAGSVAVATGAHGRQVLEQEQ
PTLLFDDLSDTDGVLRALGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023198PGP-like_dom2
IPR023214HAD_sf
IPR041492HAD_2
IPR036412HAD-like_sf