Gvermi6240.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6240.t1 vs. uniprot
Match: A0A2V3IVC1_9FLOR (Transcription initiation factor TFIID subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVC1_9FLOR) HSP 1 Score: 162 bits (410), Expect = 2.880e-43 Identity = 83/103 (80.58%), Postives = 96/103 (93.20%), Query Frame = 0
Query: 1 MSSRVVTYARKNSAAEAAQTSKNAAGTAEADTVFLAPDEPPPVSAGDIDADGKPLSVIESHVHSAPCVKTETPPTEVLLVRNENKMFVRQIDSVIYVGVTKPK 103
M+SRVVT+ARK+SAAEAAQ SKNAAGTAEADTVFLAPDEPPPV+AGDID+DGK LSVIESHV+SAPC KT TP T+ LLVRN+N+MFVR+IDSV+ VG+T+PK
Sbjct: 688 MASRVVTFARKDSAAEAAQASKNAAGTAEADTVFLAPDEPPPVNAGDIDSDGKHLSVIESHVYSAPCAKTTTPTTDFLLVRNDNEMFVREIDSVVSVGMTEPK 790
BLAST of Gvermi6240.t1 vs. uniprot
Match: R7QJK0_CHOCR (Bromo domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJK0_CHOCR) HSP 1 Score: 140 bits (354), Expect = 9.840e-36 Identity = 71/103 (68.93%), Postives = 88/103 (85.44%), Query Frame = 0
Query: 1 MSSRVVTYARKNSAAEAAQTSKNAAGTAEADTVFLAPDEPPPVSAGDIDADGKPLSVIESHVHSAPCVKTETPPTEVLLVRNENKMFVRQIDSVIYVGVTKPK 103
M+SR+VTYARK+SAA AAQ SKNAAGT EADTVF+APDEPPP+ AGD++A+GKPLSV+ESHV +A CV+ T+ LLVRN KM+VR+IDSV+ +GVT+PK
Sbjct: 759 MASRIVTYARKDSAAAAAQASKNAAGTPEADTVFMAPDEPPPLHAGDLEANGKPLSVVESHVFAAACVRQTAKTTDFLLVRNGGKMYVREIDSVVALGVTEPK 861
BLAST of Gvermi6240.t1 vs. uniprot
Match: A0A7S1XFX4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFX4_9RHOD) HSP 1 Score: 90.1 bits (222), Expect = 5.420e-18 Identity = 45/103 (43.69%), Postives = 69/103 (66.99%), Query Frame = 0
Query: 1 MSSRVVTYARKNSAAEAAQTSKNAAGTAEADTVFLAPDEPPPVSAGDIDADGKPLSVIESHVHSAPCVKTETPPTEVLLVRNENKMFVRQIDSVIYVGVTKPK 103
M SR+VTY+R +S + A + + NA GT +ADTVF+AP++PPP+ AGDI D P+++I SH+ APCV ++ L+ R K + R+I ++ VG+ +PK
Sbjct: 556 MVSRLVTYSRCSSVSAAMKAASNAVGTPDADTVFMAPEDPPPLRAGDILQDQPPVTMISSHIFDAPCVVQPPNSSDFLVCRKGGKFYFREIHGLVSVGMVEPK 658
BLAST of Gvermi6240.t1 vs. uniprot
Match: A0A7S0ZBU9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBU9_9RHOD) HSP 1 Score: 82.4 bits (202), Expect = 2.620e-15 Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 0
Query: 1 MSSRVVTYARKNSAAEAAQTSKNAAGTAEADTVFLAPDEPPPVSAGDI---DADGKP--------------------LSVIESHVHSAPCVKTETPPTEVLLVRNENKMFVRQIDSVIYVGVTKPK 103
M+S+V Y R SA +AA + NAAGTAEA+T++L PD+PPP+ GD+ D KP + +E+ + SAPC K + L++R ++M+VR ID+V+ VGV +P+
Sbjct: 578 MASKVTKYVRMRSATQAADAATNAAGTAEAETIYLRPDDPPPLHCGDVAYSDIPTKPHHNASQHQAHNKGNSRSFRSVHTVENSLFSAPCAKFNANSNDFLMIRKGDRMYVRGIDTVVSVGVVEPR 703 The following BLAST results are available for this feature:
BLAST of Gvermi6240.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6240.t1 ID=Gvermi6240.t1|Name=Gvermi6240.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=160bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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