Gvermi6239.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6239.t1
Unique NameGvermi6239.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length247
Homology
BLAST of Gvermi6239.t1 vs. uniprot
Match: A0A2V3IJT9_9FLOR (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT9_9FLOR)

HSP 1 Score: 276 bits (705), Expect = 2.730e-90
Identity = 136/221 (61.54%), Postives = 165/221 (74.66%), Query Frame = 0
Query:   24 DPFDINRYYPPPPRNPFRVRRSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLLRIIYSNHVESLRASVTESQSKSQPRLSEDQSHSRNCC 244
            DP+D+  Y PPP + PFRVR+ IAVLGAR VGKSA  IQC +  FEPEYMPTCED F+WTT VDG  YE+ IVD DGQDEFPDFG QYTIGVD Y+LMFS++ E +F +I+RVH+KLL TL+VL   GT ELPR+LVGNQ+D    RRV  ++AQE+AD++GIPYYETSA TGENV EVF  LLRII +N V S + S  E +   + R S   +++ N C
Sbjct:   34 DPYDVRCYLPPPSQKPFRVRKRIAVLGARAVGKSAVAIQCTDNRFEPEYMPTCEDAFLWTTTVDGTKYEVTIVDTDGQDEFPDFGEQYTIGVDGYILMFSLVDESSFHIIRRVHEKLLQTLVVLDPKGTAELPRILVGNQLDMAHTRRVSRQVAQEFADEHGIPYYETSAYTGENVNEVFATLLRIINTNLVNSHKPSENELRPSCEQRESTTTANAPNYC 254          
BLAST of Gvermi6239.t1 vs. uniprot
Match: A0A2V3J3Y6_9FLOR (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Y6_9FLOR)

HSP 1 Score: 275 bits (702), Expect = 7.290e-90
Identity = 132/204 (64.71%), Postives = 163/204 (79.90%), Query Frame = 0
Query:   24 DPFDINRYYPPPPRNPFRVRRSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLLRIIYSNHVESLRASVTESQS 227
            DP+D+N Y PPP R PF VR+ IAVLGAR VGKSA  IQC    FEPEYMPTCED F+WTTVVDG  YE+ IVD DGQDEFPDFG QYTIGVD Y+LMFS+++E++F +I+RVH+KLL+TLIVL R GT+ELPR+LVGNQ+D   +RRV  + AQ++AD+N IPYYETSA T ENV+EVF R+LRII +N ++  + +V +  S
Sbjct:   34 DPYDLNCYLPPPSRTPFYVRKRIAVLGARAVGKSAVAIQCAYNRFEPEYMPTCEDAFLWTTVVDGTNYEVTIVDTDGQDEFPDFGHQYTIGVDGYILMFSLVNENSFYIIKRVHEKLLETLIVLNRKGTKELPRILVGNQLDVAHKRRVSRQAAQQFADENDIPYYETSAYTAENVREVFVRMLRIINANLLDLHKPAVPQIHS 237          
BLAST of Gvermi6239.t1 vs. uniprot
Match: R7QRP1_CHOCR (Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP1_CHOCR)

HSP 1 Score: 190 bits (482), Expect = 1.390e-56
Identity = 97/181 (53.59%), Postives = 128/181 (70.72%), Query Frame = 0
Query:   33 PPPPRNPFRVRRSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLLRIIYSN 213
            P P   PF V + IAVLGARGVGKSA +I+     FEP YM T +D + W  VV+ + Y++ I+D DGQDE  +FGM+YT GVDAYVL+FSV  E +++VI++V++KLL TL V +R GT E+PRVLVGNQID   +R+VP + A ++A   GIPY ETSA T +NV E F+ +L +I  N
Sbjct:   35 PDPDDEPFYVFKRIAVLGARGVGKSALSIRVAQNRFEPNYMLTFQDMYQWRPVVNSVQYDVSILDTDGQDENSEFGMRYTTGVDAYVLVFSVRDESSYEVIKQVNEKLLVTLNVTERVGTSEVPRVLVGNQIDIAHQRQVPSQEAAKFASNEGIPYLETSAFTSQNVNEAFDSVLCMIQQN 215          
BLAST of Gvermi6239.t1 vs. uniprot
Match: A0A7S2ZWW8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWW8_9RHOD)

HSP 1 Score: 132 bits (332), Expect = 1.060e-34
Identity = 71/165 (43.03%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   44 RSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLLR 208
            R +AV+G + VGKS+  ++ +   FE  Y PT ED F+ +T VDG  +   ++D+ GQD+   +G Q TIG+  Y+++FSV    TF +I+ V+  L   L+ L    T E+PRVLVGNQID    R+V  + AQ  A +  IPY E SAL+GE +++VF  LLR
Sbjct:   23 RKLAVIGPKCVGKSSIILRFIENTFEEGYTPTIEDLFLVSTNVDGTAFNCELLDSAGQDDVSTYGAQLTIGIRGYLIVFSVRDRETFDLIRPVNQNL---LVSLGGPATHEVPRVLVGNQIDAAGERKVSTEEAQALARELRIPYMECSALSGEGIQDVFHSLLR 184          
BLAST of Gvermi6239.t1 vs. uniprot
Match: A0A7J7IRH7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRH7_9RHOD)

HSP 1 Score: 133 bits (335), Expect = 7.450e-34
Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 0
Query:   41 RVRRSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVV-DGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLL 207
            R+RR IAVLGARGVGKSA TI+   G F   Y+PT EDT+  T    D   Y L IVD  GQDE+   G Q TIG+D YVL++SV    +F++I+ ++ +L+ TL      G +++P++LVGNQID++  R V  +   + A+  G  + E SA TG NV EVF  LL
Sbjct:   47 RIRR-IAVLGARGVGKSALTIRFCEGTFPESYLPTIEDTYQATLRGHDDEVYALEIVDTAGQDEYSSLGAQVTIGIDGYVLLYSVRDASSFEMIRYIYQRLVATL------GGDQIPKILVGNQIDESLDREVDYEEGIQVAESIGAAFCECSARTGTNVVEVFRILL 207          
BLAST of Gvermi6239.t1 vs. uniprot
Match: M1UXT7_CYAM1 (Small GTP-binding protein of Ras family n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXT7_CYAM1)

HSP 1 Score: 132 bits (331), Expect = 3.200e-33
Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = 0
Query:   41 RVRRSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVV-DGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLL 207
            RVRR IAVLGARGVGKSA TI+   G F   Y+PT EDT+  T    DG  Y L IVD  GQDE+   G Q TIG+D YVL++SV    +F++++ +  +L+  L      G++++P +LVGNQID    R V  +     A+  G  + E SA TG NV EVF  LL
Sbjct:   47 RVRR-IAVLGARGVGKSALTIRFCEGTFPESYLPTIEDTYQTTLRGRDGTVYALEIVDTAGQDEYSSLGAQATIGIDGYVLLYSVRDASSFEMVRYIFQRLVAIL------GSDQIPMILVGNQIDQALDREVSFEEGAHIAETIGAAFCECSARTGTNVAEVFRILL 207          
BLAST of Gvermi6239.t1 vs. uniprot
Match: A0A5J4YYB2_PORPP (GTP-binding protein Rheb-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYB2_PORPP)

HSP 1 Score: 128 bits (321), Expect = 4.630e-33
Identity = 70/168 (41.67%), Postives = 102/168 (60.71%), Query Frame = 0
Query:   44 RSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQ-RRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLLRII 210
            R IAVLGARGVGK++ + +     F+  Y+PT ED++  T  ++   Y   ++D  GQDE+  FG Q TIGV  + L+FSV    +F++++ ++DKLL TL      G   +PRVLVGNQ D  +  R V     + YA + G P+ E SA++GENV E F  L+R++
Sbjct:   21 RRIAVLGARGVGKTSMSTRFCENTFDDMYLPTIEDSYQATIRINNQQYICEVLDTAGQDEYSIFGTQLTIGVHGFFLVFSVRDRTSFELLKTINDKLLVTL------GASSIPRVLVGNQSDSIETEREVSYAEGESYAREIGCPFVECSAMSGENVTEAFVTLIRVM 182          
BLAST of Gvermi6239.t1 vs. uniprot
Match: A0A0L0DPX9_THETB (Psmras1 n=2 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DPX9_THETB)

HSP 1 Score: 122 bits (307), Expect = 5.880e-30
Identity = 71/175 (40.57%), Postives = 102/175 (58.29%), Query Frame = 0
Query:   46 IAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEEL----PRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLLRIIYSNHVE 216
            I +LGA GVGKSA T+Q VN +F  +Y PT ED+F+    VDG    L I+D  GQ+E+     QY    + +VL+F +    +F+ +++VH K+        R  TE +    P VLVGN++D    R+V ++ A+  A Q G PY+E SALT ENV+ VF  + RI+ +N  E
Sbjct:  121 IVMLGAGGVGKSALTLQFVNNMFLADYEPTIEDSFLKQLTVDGQSCRLSILDTAGQEEYTTITDQYIEVGEGFVLVFDITSAASFEDVKKVHSKV--------RRVTEAMDDLPPMVLVGNKVDLVDLRQVEKETAESLAAQFGCPYFEASALTRENVENVFHEITRIMRANDAE 287          
BLAST of Gvermi6239.t1 vs. uniprot
Match: A0A7S3L3I0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3I0_9STRA)

HSP 1 Score: 119 bits (298), Expect = 8.900e-30
Identity = 68/174 (39.08%), Postives = 96/174 (55.17%), Query Frame = 0
Query:   37 RNPFRVRRSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLLRII 210
            + P  V R +A+LG R VGKS+     V G F   Y+PT E T   T     + +   IVD  G DE+       ++GV  YVL+FS+++ H+F+ I +V+  L+ TL       + ++PRVLVG   D  + R+V    AQ  AD  G+PY E S+ TGENV +VF  LL+ I
Sbjct:    5 KEPSLVHRKVAILGNRSVGKSSLANSFVTGTFSETYVPTIETTHSKTIRFRKVHFATDIVDTAGMDEYSRLSRNASLGVQGYVLVFSIVNRHSFEQIIQVNKILISTL-----GDSPDVPRVLVGTHRDLNESRQVKYNDAQRLADSWGVPYLECSSRTGENVADVFHTLLKEI 173          
BLAST of Gvermi6239.t1 vs. uniprot
Match: A0A2R4IKW1_9EUKA (Rheb n=1 Tax=Planomonas micra TaxID=554453 RepID=A0A2R4IKW1_9EUKA)

HSP 1 Score: 116 bits (290), Expect = 2.560e-28
Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 0
Query:   43 RRSIAVLGARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADGQDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRNGTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVKEVFERLLRIIYSNHVESLRASVTESQS 227
            +R I VLG RGVGKSA TIQ     F   Y PT E+TF  T  +    + + +VD  GQDE+  F  QY++GVD Y+L++S+  + + ++I+ ++DK+L+        G E +PRVL+GN+ D   RR+V  +  Q  A Q G  + E SA   ++++E F  +L       +E  RA   E +S
Sbjct:   38 KRKIVVLGFRGVGKSAVTIQFCENHFADMYHPTIENTFERTVQLGSEEFTVQVVDTAGQDEYSVFPSQYSVGVDGYLLVYSIASKSSLQMIKVLNDKILNAA------GVESVPRVLIGNKCDMGARRQVTVEDGQRLAAQWGCSHMEVSAKHNQHIEEAFMGVLA-----EIEKSRAPAVEEKS 211          
The following BLAST results are available for this feature:
BLAST of Gvermi6239.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJT9_9FLOR2.730e-9061.54GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
A0A2V3J3Y6_9FLOR7.290e-9064.71GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
R7QRP1_CHOCR1.390e-5653.59Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7... [more]
A0A7S2ZWW8_9RHOD1.060e-3443.03Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IRH7_9RHOD7.450e-3446.43Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1UXT7_CYAM13.200e-3346.43Small GTP-binding protein of Ras family n=1 Tax=Cy... [more]
A0A5J4YYB2_PORPP4.630e-3341.67GTP-binding protein Rheb-like n=1 Tax=Porphyridium... [more]
A0A0L0DPX9_THETB5.880e-3040.57Psmras1 n=2 Tax=Thecamonas trahens ATCC 50062 TaxI... [more]
A0A7S3L3I0_9STRA8.900e-3039.08Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A2R4IKW1_9EUKA2.560e-2837.30Rheb n=1 Tax=Planomonas micra TaxID=554453 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 44..65
score: 32.97
coord: 67..83
score: 26.66
coord: 188..210
score: 41.61
coord: 153..166
score: 39.62
coord: 84..106
score: 29.63
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 40..213
e-value: 1.1E-33
score: 128.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 46..213
e-value: 1.0E-10
score: 24.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePROSITEPS51419RABcoord: 39..246
score: 17.388819
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 46..213
e-value: 2.8E-5
score: -49.9
IPR001806Small GTPasePFAMPF00071Rascoord: 46..211
e-value: 1.3E-33
score: 115.9
IPR001806Small GTPasePROSITEPS51421RAScoord: 38..246
score: 16.209944
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 44..204
e-value: 1.7E-16
score: 58.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 39..217
e-value: 7.9E-44
score: 150.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..220
IPR020849Small GTPase, Ras-typePANTHERPTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYcoord: 45..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:3452993..3453733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6239.t1Gvermi6239.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 3452993..3453733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6239.t1 ID=Gvermi6239.t1|Name=Gvermi6239.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=247bp
MSQVDPNHDDDPPPTQPEAPAAADPFDINRYYPPPPRNPFRVRRSIAVLG
ARGVGKSAFTIQCVNGVFEPEYMPTCEDTFMWTTVVDGIFYELIIVDADG
QDEFPDFGMQYTIGVDAYVLMFSVLHEHTFKVIQRVHDKLLDTLIVLKRN
GTEELPRVLVGNQIDDTQRRRVPEKIAQEYADQNGIPYYETSALTGENVK
EVFERLLRIIYSNHVESLRASVTESQSKSQPRLSEDQSHSRNCCVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR020849Small_GTPase_Ras-type