Gvermi6218.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6218.t1
Unique NameGvermi6218.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length504
Homology
BLAST of Gvermi6218.t1 vs. uniprot
Match: A0A2V3IVA2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA2_9FLOR)

HSP 1 Score: 191 bits (484), Expect = 8.490e-52
Identity = 116/259 (44.79%), Postives = 153/259 (59.07%), Query Frame = 0
Query:    3 EVIDLTSDTEAP---PRLRRTGPRAVHNDADLCIVSESIRYDDQPATPPQPRAPPPAAPRSISPDGSCVVSAQFPPQGAARAPKRQRSAGDDSPQVVALKRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQWADHCRAIDNDVWKRKRRDVRKATKRYERGVDLLAKEARRLEKRARTEQERTLVLEALG-DTRNLAEIIAEQVDIVAQCHN-RVAPDTSGLPLSATQTAPAATQAPASNPRL 256
            EVIDLTS    P   PR+RR  P  + +D +L +VSE +++  +P  P  PR P    P                        KR R    ++PQVV LK+GI PLEDYPH RF C++ P++ Q+A  +C KCFCFVCDV A+ CQ+W  HC A+DN+ WK +RR+ RKA++RYERGVDLLAKEARR EKR+R E+ER  VLEALG +     +++AEQ++ V++ +   VA      P    Q   A TQ  A  P L
Sbjct:    2 EVIDLTSSDTEPLRLPRVRRPCP--IPDDPELVLVSEKLKHAPKPREPAPPRNPSTPTPS-----------------------KRPRLKTTEAPQVVGLKKGIKPLEDYPHARFACTQQPYSAQNARKYCPKCFCFVCDVLASTCQEWERHCNAVDNEEWKMERREKRKASRRYERGVDLLAKEARRREKRSRKEKERREVLEALGGEILTFEQLMAEQMEAVSEFYKGMVADPEQHSPQENQQNVQAQTQTNAPPPTL 235          
BLAST of Gvermi6218.t1 vs. uniprot
Match: A0A251V1I0_HELAN (Uncharacterized protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251V1I0_HELAN)

HSP 1 Score: 75.1 bits (183), Expect = 3.310e-12
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   91 DSPQV-VALKRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQWAD---HCRAIDNDVWKRKRRDVRKATK 171
            DSP V +  ++G     DYPH R  C + PF   S  S+C+ C+CFVCDV AA C+ W+    HC AIDN+ WK  R+ +R++ K
Sbjct:   87 DSPDVFLVAEKGQVACRDYPHSRHLCVKHPFEKTSHESYCKLCYCFVCDV-AAPCKLWSGVSGHCHAIDNEGWKAARKSLRRSCK 170          
BLAST of Gvermi6218.t1 vs. uniprot
Match: S8DVJ0_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DVJ0_9LAMI)

HSP 1 Score: 73.2 bits (178), Expect = 4.170e-12
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   90 DDSPQVVALKRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQWAD-HCRAIDNDVWKRKRR 164
            DDS  ++  + G     DYPHPR  C+  PF+  S  S+C+ CFC+VCD  +A C +W + HC A D+  W RK++
Sbjct:   43 DDSGFILVAQNGQVACRDYPHPRHACAEFPFHKTSHRSYCKMCFCYVCD-SSAPCLEWEESHCHAFDDAQWNRKKK 117          
BLAST of Gvermi6218.t1 vs. uniprot
Match: A0A830C394_9LAMI (Uncharacterized protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C394_9LAMI)

HSP 1 Score: 70.1 bits (170), Expect = 1.300e-10
Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 0
Query:   79 ARAPKRQRSAGDDSPQVVALKRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQW---ADHCRAIDNDVWKRKRR 164
            +R P R+     DS   V  +RG     DYPHPR +C++  F      S+C+ C+C+VCDV +A C +W   + HC A +N+ W ++++
Sbjct:   59 SRFPLREDFDNADSDLHVVAERGQVACRDYPHPRHNCAKFHFEKTPHDSYCKLCYCYVCDV-SAPCSKWVGSSGHCHAFNNEAWDQEKK 146          
BLAST of Gvermi6218.t1 vs. uniprot
Match: A0A5N6N8N5_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6N8N5_9ASTR)

HSP 1 Score: 69.7 bits (169), Expect = 2.160e-10
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   91 DSPQV--VALKRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQW---ADHCRAIDNDVWKRKRRDVRK 168
            D P++  ++ K  +    DYPH R  C + PF   S  S+C+ C+CFVCDV AA C+ W     HC AIDN+ WK  R+ ++K
Sbjct:   83 DPPEIYIISEKGQVVACRDYPHSRHLCVKHPFGKTSHESYCKLCYCFVCDV-AAPCKSWFGHCGHCHAIDNEGWKVARKMLKK 164          
BLAST of Gvermi6218.t1 vs. uniprot
Match: M0ZIQ0_SOLTU (Uncharacterized protein n=4 Tax=Solanum TaxID=4107 RepID=M0ZIQ0_SOLTU)

HSP 1 Score: 67.8 bits (164), Expect = 7.730e-10
Identity = 30/74 (40.54%), Postives = 41/74 (55.41%), Query Frame = 0
Query:   90 DDSPQVVALKRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQWAD---HCRAIDNDVWK 160
            D S   V  ++G     D+PHPR DC + PF       +C  C+C+VCDV AA C+ W     HC A++N+ WK
Sbjct:   73 DASDLSVLAEKGEVACRDFPHPRHDCVKHPFEKTPHQDYCEMCYCYVCDV-AAPCKSWTGNSAHCHAMNNEAWK 145          
BLAST of Gvermi6218.t1 vs. uniprot
Match: A0A7S3Q3D4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3D4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.530e-9
Identity = 35/77 (45.45%), Postives = 44/77 (57.14%), Query Frame = 0
Query:  103 NPLEDYPHPRFDCSRLPF-------------NPQSASSFCRKCFCFVCDVHAAQCQQWA-DHCRAIDNDVWKRKRRD 165
            NPL ++PHPR  C    F               +S S  C KC+C+VCD+ A+QCQ WA DHC A D+D WK KRR+
Sbjct:  313 NPLTEFPHPRHLCGVHAFAKDVHVCSDVDKVTGKSNSQICDKCYCYVCDIPASQCQSWAGDHCHAFDSDGWKEKRRN 389          
BLAST of Gvermi6218.t1 vs. uniprot
Match: A0A2Z7CDX7_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CDX7_9LAMI)

HSP 1 Score: 67.4 bits (163), Expect = 1.950e-9
Identity = 33/82 (40.24%), Postives = 46/82 (56.10%), Query Frame = 0
Query:   92 SPQV-VALKRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQWAD---HCRAIDNDVWKRKRRDVRKA 169
            SP V V  ++G     DYPHPR  C+  PF      ++C+ C+C+VCD  +A C+ W+    HC A DN+ W   RR  R+A
Sbjct:   96 SPDVRVVAEKGQIACRDYPHPRHACAEHPFVMTPHDTYCKLCYCYVCD-SSAPCKMWSGSSGHCHAFDNEAWNHLRRSKRQA 176          
BLAST of Gvermi6218.t1 vs. uniprot
Match: A0A103YEA8_CYNCS (Uncharacterized protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103YEA8_CYNCS)

HSP 1 Score: 67.0 bits (162), Expect = 2.160e-9
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0
Query:   83 KRQRSAGDDSPQVVAL-KRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQWAD---HCRAIDNDVWKRKRRDVRK 168
            K Q +   DSP +  L +RG     DYPH R  C   PF      S+C+ C+C+VCDV AA C+ W+    HC AID + W   R  V+K
Sbjct:   80 KGQHNNPQDSPDISLLAERGQVACRDYPHSRHLCVNNPFENTPHESYCKLCYCYVCDV-AAPCKSWSGVGGHCHAIDTEGWNFVRNCVKK 168          
BLAST of Gvermi6218.t1 vs. uniprot
Match: A0A1R3JKY6_COCAP (Uncharacterized protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3JKY6_COCAP)

HSP 1 Score: 65.5 bits (158), Expect = 1.230e-7
Identity = 38/108 (35.19%), Postives = 49/108 (45.37%), Query Frame = 0
Query:   67 CVVSAQFPPQGAARAPKRQRSAGDDSPQVVALKRGINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQWA------DHCRAIDND-VWKRKRRDVR 167
            CVV    P +  +     Q  + D    ++   +G     D+PHPR DC++ PFN  S    C  C CFVCD   A CQ W       DHC A D +  WK  R+  R
Sbjct:   81 CVVLEGDPDKTLSDVTDAQEGSDD---LLIVGHKGPIACRDFPHPRHDCAKFPFNSTSHEQHCELCHCFVCDT-PAPCQYWGSSISKVDHCHATDKEETWKTLRKTFR 184          
The following BLAST results are available for this feature:
BLAST of Gvermi6218.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2V3IVA2_9FLOR8.490e-5244.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A251V1I0_HELAN3.310e-1244.71Uncharacterized protein n=1 Tax=Helianthus annuus ... [more]
S8DVJ0_9LAMI4.170e-1242.11Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
A0A830C394_9LAMI1.300e-1035.96Uncharacterized protein n=1 Tax=Phtheirospermum ja... [more]
A0A5N6N8N5_9ASTR2.160e-1042.17Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
M0ZIQ0_SOLTU7.730e-1040.54Uncharacterized protein n=4 Tax=Solanum TaxID=4107... [more]
A0A7S3Q3D4_9STRA1.530e-945.45Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A2Z7CDX7_9LAMI1.950e-940.24Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]
A0A103YEA8_CYNCS2.160e-941.11Uncharacterized protein n=1 Tax=Cynara cardunculus... [more]
A0A1R3JKY6_COCAP1.230e-735.19Uncharacterized protein n=2 Tax=Corchorus TaxID=93... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..384
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..503
NoneNo IPR availablePANTHERPTHR33443ZGC:112980coord: 2..489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:3308630..3310141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6218.t1Gvermi6218.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 3308630..3310141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6218.t1 ID=Gvermi6218.t1|Name=Gvermi6218.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=504bp
MPEVIDLTSDTEAPPRLRRTGPRAVHNDADLCIVSESIRYDDQPATPPQP
RAPPPAAPRSISPDGSCVVSAQFPPQGAARAPKRQRSAGDDSPQVVALKR
GINPLEDYPHPRFDCSRLPFNPQSASSFCRKCFCFVCDVHAAQCQQWADH
CRAIDNDVWKRKRRDVRKATKRYERGVDLLAKEARRLEKRARTEQERTLV
LEALGDTRNLAEIIAEQVDIVAQCHNRVAPDTSGLPLSATQTAPAATQAP
ASNPRLALQRHGAGLHSVSPVPELLPRTLPVATNVAHTNPPARPALFGRS
PLLPRNGATLPSLAQLYRDLRAVNALPPPFIPSAAARCTANALAPIGLFR
AADADATESEKDSDFPHYSEESQEVSRSDDNSIEQGEPECVAELQGNATE
AAKSGANADERPAKQRKKSAAPQSKAPKRNGNAAPDCFSLNSRAQKPPFA
VNSLYVHRSVERPRPKKHSKARSTDHDNRKPQAAQDSQSRVHKKHKSKRP
NRR*
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