Gvermi6185.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6185.t1
Unique NameGvermi6185.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length242
Homology
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BLAST of Gvermi6185.t1 vs. uniprot
Match: A0A2V3IFQ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFQ4_9FLOR)

HSP 1 Score: 252 bits (643), Expect = 7.980e-81
Identity = 176/265 (66.42%), Postives = 187/265 (70.57%), Query Frame = 0 
Query:    5 TDHSNPPS-KRRRGRQPRPSSLSSSVKAAVAQFAHRVGQPRVIEPAGFRDFRGWLSYVGSHSAATAWAPLVDAVLRDTNGDASAIEALKSDLVREIVKRVVIPRASESSKLVSTNCGRQCARPPNGVTLMTILDGVFHDPAEWRHFIDSMPSASGHRSQPAXXXXXXXXSSTSHLALLSSXXXXXXXXLPL---------------------HHAPH------LXXXXXXXXXXXXXAAAPLPSFQELEDSLRHTPSSRGKRSRR 241
            +DH  PPS KRRRGRQPRPSSLSSSVKAAV QFA++VGQPRVIEPAGFRDFRGWL+YVGSHSAATAWAPLVDAVLRDTNG  S+IEALK DLVREIVK+VVIPR  ESSKLVSTNCGRQCARP NGVTLMTILD +F D  +WR FIDSM S    RS   XXXXXXXX           XXXXXXXX                        HH+ +       XXXXXXX         PLPSFQELEDSLR T S RGKR+RR
Sbjct:    4 SDHPIPPSTKRRRGRQPRPSSLSSSVKAAVLQFANQVGQPRVIEPAGFRDFRGWLAYVGSHSAATAWAPLVDAVLRDTNGHRSSIEALKEDLVREIVKKVVIPRHGESSKLVSTNCGRQCARPANGVTLMTILDSIFLDTGQWRSFIDSMASPQNTRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSXHHSSYHAYSXXXXXXXXXXRHSRSSQQPPLPSFQELEDSLRAT-SKRGKRARR 267
The following BLAST results are available for this feature:
BLAST of Gvermi6185.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFQ4_9FLOR7.980e-8166.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:3088225..3088950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6185.t1Gvermi6185.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 3088225..3088950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6185.t1 ID=Gvermi6185.t1|Name=Gvermi6185.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=242bp
MYNPTDHSNPPSKRRRGRQPRPSSLSSSVKAAVAQFAHRVGQPRVIEPAG
FRDFRGWLSYVGSHSAATAWAPLVDAVLRDTNGDASAIEALKSDLVREIV
KRVVIPRASESSKLVSTNCGRQCARPPNGVTLMTILDGVFHDPAEWRHFI
DSMPSASGHRSQPASGHRSQPASSTSHLALLSSSAPPPSSSLPLHHAPHL
HSSSSSSSRQSRAAAAPLPSFQELEDSLRHTPSSRGKRSRR*
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