Gvermi6162.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6162.t1
Unique NameGvermi6162.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length526
Homology
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BLAST of Gvermi6162.t1 vs. uniprot
Match: A0A2V3ISN1_9FLOR (BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN1_9FLOR)

HSP 1 Score: 341 bits (875), Expect = 1.900e-104
Identity = 173/313 (55.27%), Postives = 223/313 (71.25%), Query Frame = 0 
Query:    1 LSDPSRVTSKLFEALVNSRVGVCDAHIHTKD-LVVPVSRSVLAALNSFLADYACPAALNPPXXXXXXXXXXXXRPLPILAEHLRHVLEFIYTNDCAFVRNVRSSVLWRKDNDV-SPSVIVQIIHLANAAHLCHTPELSTWCENTAMAIVRHRPNLLCSALKTIINCPTSNAQRLIDLWMSRVFQQPAYFLGSVCTLNSPLQLNPTTADLR-TPIVDLDANTLSTILKARQDNDEYYFRALYCWATRGYTEFVRAGARWRNAVKLVSRIDLTKVSSKFLLGFVDSSGLIPEQDMPVIIRKHLAAKSNLPQSYGM 310
            +SDPSRVTS L +AL+NSRVGVCDAH+HT D  +VPVSRSVL  LNS+LA Y C     P               LP+ ++HLRHVLEFIYTNDC+F+R +RS  LWRK++++ S   I  +I LA+AAH+CHTP+LS W E TA  +VR  P L+C+AL+T++   T+N+++LI  W++R+F+QPA FLG + T N P++    +A      ++DLDAN+ + IL     + EYYFRA+YCWATRGYT+  RAG RWRNA +L  RID TKVSSKFLLGFVDSSGL+ EQ M  I R  LA+KSNLP+SYG+
Sbjct:  227 VSDPSRVTSLLCDALLNSRVGVCDAHLHTTDNSIVPVSRSVLTVLNSYLASYTCAVPSKPKEEHPPNFQC-----LPLSSQHLRHVLEFIYTNDCSFLRKLRSKHLWRKESELPSADTISNVILLAHAAHICHTPDLSAWSEGTARELVRRNPPLVCAALRTVLKNTTANSEQLISSWLARIFEQPAAFLGRMRTGNVPIEHQQNSAAPGGLSVLDLDANSFAKILAPDHHHHEYYFRAIYCWATRGYTDHSRAGPRWRNAKRLAQRIDFTKVSSKFLLGFVDSSGLVDEQTMASIYRMQLASKSNLPKSYGL 534
The following BLAST results are available for this feature:
BLAST of Gvermi6162.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISN1_9FLOR1.900e-10455.27BTB domain-containing protein n=1 Tax=Gracilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..450

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2798668..2800245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6162.t1Gvermi6162.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2798668..2800245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6162.t1 ID=Gvermi6162.t1|Name=Gvermi6162.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=526bp
LSDPSRVTSKLFEALVNSRVGVCDAHIHTKDLVVPVSRSVLAALNSFLAD
YACPAALNPPPPPHPHPAPAHARPLPILAEHLRHVLEFIYTNDCAFVRNV
RSSVLWRKDNDVSPSVIVQIIHLANAAHLCHTPELSTWCENTAMAIVRHR
PNLLCSALKTIINCPTSNAQRLIDLWMSRVFQQPAYFLGSVCTLNSPLQL
NPTTADLRTPIVDLDANTLSTILKARQDNDEYYFRALYCWATRGYTEFVR
AGARWRNAVKLVSRIDLTKVSSKFLLGFVDSSGLIPEQDMPVIIRKHLAA
KSNLPQSYGMQCAKDKPKKRTAAASDHHTHSPQKKQRLEQGTGSGHGSSP
VAQSQQPHASLRAPSTAASLHNTPPPPSLPLSTPPHHTPNHPPSMRPHHL
PTPFSSTRTFSIVTRAGERAQLAPHSTPQAPSTAATSSRHTQQLQATPQQ
GAPPPHQPQPAPVPNYFPGTAVHHDPTADAAHAMRSEQTPTSALGQSDDD
FIAVKKELIEELKPKVKEESEIIQV*
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