Gvermi6122.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6122.t1
Unique NameGvermi6122.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length595
Homology
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BLAST of Gvermi6122.t1 vs. uniprot
Match: A0A2V3J0P5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0P5_9FLOR)

HSP 1 Score: 131 bits (330), Expect = 6.290e-31
Identity = 79/258 (30.62%), Postives = 141/258 (54.65%), Query Frame = 0 
Query:  326 MAYSIGLATHILLSDANDEEGTILLNEATSNAFILSLCRKRDRNTALIPFHLFEDQMEHVKGILRGAVYGTNVDSPEQQWINI-PTASSFSLIINVAYYLFKEDIDFLSSIDSHGRPIVMQNVGKSVYLRRISKQITEEVSVFLLGRAYASARAVLKGTDANGGSQNSAYPGAGTGMNCPSGWKYVPRVGPVANIIENCCSVKCEVMENVIYSYIVQSEVCCRACNLLSCEAGVGTTPLTGTSAAVPSNDISAEQPAY 582
            MAY++GL   +  S A +E+ + L++++   A+ ++ CRK++  T      L E Q + +  +L    Y  + D+P  +  +I P++S+ S II V ++ F+ +ID+LSS+++H RPI++  VG S+Y+R +   + E+VS   L   Y+       G+  + G  + A+  +   + CP GWKYV R+ PV ++ E C S++C  +++ +  ++VQ E CC  CN   C A         T   V S +++  QP +
Sbjct:    1 MAYALGLGLQVHFSFAENEKASELIDDSCFRAYRIAKCRKQNGKTECRSIVL-ETQAKRIGTLLDKHGYRDDPDAPFVKSSSIFPSSSNISQIIRVGFHFFQREIDYLSSMNAHERPIILDTVGHSIYMRDMRAVLLEDVSRSSLYVLYS----FFGGSKVSSGGVSDAH--SDVPIRCPDGWKYVQRITPVDDVYEYCYSLQCFSLDHTVMVFMVQKESCCDKCNYFRCAAA--------TDEVVGSKEVTDGQPKH 243
The following BLAST results are available for this feature:
BLAST of Gvermi6122.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J0P5_9FLOR6.290e-3130.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..133
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..594
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2594712..2596496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6122.t1Gvermi6122.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2594712..2596496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6122.t1 ID=Gvermi6122.t1|Name=Gvermi6122.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=595bp
MLLSFLLASAAIFVLIRGRHFTPPSSQIPQSWSENRDAIAHSLIVNNPSH
VQTERSISETPPSRNTVPESKSMKWVDFPSSAFSFMNSAPNSNTGTSLAS
KAPSQQSSTDIMKSGVEAHNDSSPAVATENGVASGKTTHDDTNPVELICA
SYVSFRSVLEMTYDSHVTLIRHGIPSRTVKHFYDDALRYLARSECSCSGE
RSRISNICEQAVFFRYSVEVVICSRLFDLIEIDNHKSGHDQKFPLYHKNA
QNPLPELSSEEKAAIRSAKMRTFEMLLLAEGEEKNEIMIDSVFPDSEELL
FVEGEQNLVCDMFRNVSVGLPVGHYMAYSIGLATHILLSDANDEEGTILL
NEATSNAFILSLCRKRDRNTALIPFHLFEDQMEHVKGILRGAVYGTNVDS
PEQQWINIPTASSFSLIINVAYYLFKEDIDFLSSIDSHGRPIVMQNVGKS
VYLRRISKQITEEVSVFLLGRAYASARAVLKGTDANGGSQNSAYPGAGTG
MNCPSGWKYVPRVGPVANIIENCCSVKCEVMENVIYSYIVQSEVCCRACN
LLSCEAGVGTTPLTGTSAAVPSNDISAEQPAYKSPFHGVTMVSI*
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