Gvermi6117.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6117.t1
Unique NameGvermi6117.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length352
Homology
BLAST of Gvermi6117.t1 vs. uniprot
Match: A0A2V3J3K1_9FLOR (Histone H2A deubiquitinase MYSM1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3K1_9FLOR)

HSP 1 Score: 445 bits (1144), Expect = 1.210e-153
Identity = 230/349 (65.90%), Postives = 270/349 (77.36%), Query Frame = 0
Query:    1 MSREHPELIDLTDVAAQ-----------PLRRSTRNRKQTEPFTIHVDQRTASNSSDREQRLEQLPYCTAEELGIDPLSVPYIRVHPVALALITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQQHVYKDDPFVAAIIAPYNDQLPDHHPDIQFFRVSAQQAPLQMPYEVCYARLAQHLHPLTPH---DITFPLDAFMGECYNLISEYSAFGRRVRLDKEWRHQVMGFVKLKRALHEIVQSAQPSEQERLYRSAVDALVLAVEDAWKDSSAQESER 335
            M     E IDLT+               PLRRSTR R+QTEPFTI V Q+  S  +  +QRLEQ+PY TAE+LG++   VP++RVHPVALA+ITFHAHLTKTEIIGYL GF T V ++ EIL+AEAFPA+QVKPSDLAKTGRSAFTEVEALPESTIEIA RV AKGMRVVGWYHSHPDE FTTEPSRVDIENQ+NYQ  VYKD+PFVAAIIAPYN+ LPDH PD++FFRV A++  L++ YEVCY  L Q+L   T     +I+FPLD+FMGECY+LI+EYS+FGRRVRLDK WR  V+G  KLKRAL ++V      EQ  LYRSAVDA+V AV+ AWK+S+ +E ER
Sbjct:    1 MPSSQKECIDLTESGITEDANYSSPSNVPLRRSTRARRQTEPFTIEVSQQRESKQAQSQQRLEQVPYQTAEQLGLEASVVPFVRVHPVALAMITFHAHLTKTEIIGYLAGFETEVDNKKEILIAEAFPAKQVKPSDLAKTGRSAFTEVEALPESTIEIAARVSAKGMRVVGWYHSHPDETFTTEPSRVDIENQRNYQHLVYKDEPFVAAIIAPYNEDLPDHRPDVEFFRVWAEECALKLSYEVCYNGLVQYLRATTVGNGGEISFPLDSFMGECYDLITEYSSFGRRVRLDKNWRADVLGVDKLKRALCDLVAEFD-CEQVALYRSAVDAIVEAVDKAWKESAFRELER 348          
BLAST of Gvermi6117.t1 vs. uniprot
Match: A0A8H7RBG9_9FUNG (Myb-like, SWIRM and MPN domain-containing protein 1 n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RBG9_9FUNG)

HSP 1 Score: 111 bits (278), Expect = 2.620e-23
Identity = 95/312 (30.45%), Postives = 145/312 (46.47%), Query Frame = 0
Query:   22 STRNRKQTEPFTIHVDQRTASNSSDREQRLEQLPYCTAEELGIDPLSVPYIRVHPVALALITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQ-----------QHVYKDDPFVAAIIAPYNDQLPDHHPDIQFFRVSAQQAPLQMPYEVCYARLAQHLHPLTPHDITFPLDAFMGECYNLISEYSAFGRRVRLDKEWRHQVMGFVKLKRALHEIVQSAQPSEQERLY---RSAVDALVL 319
            ++R RKQ +P +++  Q    N+ D    ++  P+       ++      I V    L  + FHAHL  TE+IG+L G   +   R  I   EAFP R ++      TG++    VE  P S IE    +E + ++VVGWYHSHP   F  +PS VDIENQ+NYQ            H+   +PFV AI+ PY+  LP     I +F VS       +P ++ Y         L  +D    ++  +   ++L+S Y     +V   + WR Q     KL++ +  +  S  P  Q +L     SA+D + L
Sbjct:  416 TSRLRKQRDPSSVNYGQ--IINNDDPLTMIKCEPFMGKPGSNVNGCQPFEISVDSNVLLAMDFHAHLMTTEVIGFLAGKWDKETMRMSI--REAFPCRSIE------TGQN-DVNVEMDPTSAIETRGLIEERHLQVVGWYHSHPT--FIPDPSLVDIENQRNYQLLCREDHHESMPHLPSSEPFVGAIVGPYDPALPGSSSVINWFHVSNTNTDRPVPKKLIYE--------LKENDALDSVE--IERLFDLLSTYKDSREKVVFGEYWR-QDASETKLQKMIKSLA-SRMPWIQRQLKSENNSALDDMFL 702          
BLAST of Gvermi6117.t1 vs. uniprot
Match: A0A7J7ILM2_9RHOD (MPN domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILM2_9RHOD)

HSP 1 Score: 105 bits (263), Expect = 4.240e-23
Identity = 62/147 (42.18%), Postives = 84/147 (57.14%), Query Frame = 0
Query:   81 LITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQQHVYKD---DPFVAAIIAPYNDQLPDHHPDIQFFRVSAQQA 224
            ++  HAHL   E+IG+LGG      +R E+ V +AFP R       A  GR+   +VE  PES +E  N +EA G+ VV WYHSHP   F  EPS  D++NQ+NYQ+    D    PF+AAI++PY+ +L      IQ+F V    A
Sbjct:    1 MMDLHAHLDLREVIGFLGGRYDP--ARKELHVTDAFPCR-------AAQGRAGHLDVELDPESAVEARNIIEASGLAVVAWYHSHPT--FQPEPSVRDLDNQRNYQKQFESDGAPSPFLAAIVSPYDPKLRTARSAIQWFHVGLNPA 136          
BLAST of Gvermi6117.t1 vs. uniprot
Match: A0A7S0IDA4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IDA4_MICPS)

HSP 1 Score: 107 bits (266), Expect = 4.270e-23
Identity = 63/144 (43.75%), Postives = 87/144 (60.42%), Query Frame = 0
Query:   81 LITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQQHVYKDD----PFVAAIIAPYNDQLPDHHPDIQFFRVS 220
            L+ FH+H+ + EIIG+LGG  T       + V  A PAR++    L   G +A  EVE  PES  +I   ++  G+RVVGWYHSHP   F T PS  D+ENQ NYQ+ +++DD    PFV AI+ PY  + PD   D+++F V+
Sbjct:  130 LMDFHSHICRHEIIGFLGG--TWDPRTKSLAVKRALPARRLV---LGAPGENANVEVELDPESVPDIVEALDRDGLRVVGWYHSHP--VFDTHPSLRDVENQANYQR-LFRDDEGGVPFVGAIVGPYATRNPDLSSDVRWFHVA 265          
BLAST of Gvermi6117.t1 vs. uniprot
Match: A0A367K1D4_RHIST (Myb-like, SWIRM and MPN domain-containing protein 1 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367K1D4_RHIST)

HSP 1 Score: 110 bits (274), Expect = 5.230e-23
Identity = 69/178 (38.76%), Postives = 96/178 (53.93%), Query Frame = 0
Query:   62 LGIDPLSVPYIRVHPVALALITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQ-----QHVYKDDPFVAAIIAPYNDQLPDHHPDIQFFRVSAQQAPLQMPYEVCY 234
            LG  P     + V    L  + FHAHL  TEIIG+L G   +     +++V EA+P R ++      TG++    VE  P S IE    +E + M+VVGWYHSHP   F  +PS VDIENQ+NYQ     +HV+  +PFV AI+ PY+  LP     I +F V+   +   +P  + Y
Sbjct:  319 LGSQPFE---LAVESNVLLAMDFHAHLMTTEIIGFLAGDWDK--DTKQLVVKEAYPCRSIE------TGQN-DVNVEMDPTSAIETRQLIEERNMKVVGWYHSHPT--FIPDPSLVDIENQRNYQILCREEHVHSLEPFVGAIVGPYDPALPGSASVINWFHVNNAHSDRPIPKRLVY 482          
BLAST of Gvermi6117.t1 vs. uniprot
Match: A0A1Y2GTF5_9FUNG (Myb-like, SWIRM and MPN domain-containing protein 1 n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GTF5_9FUNG)

HSP 1 Score: 110 bits (276), Expect = 5.280e-23
Identity = 77/232 (33.19%), Postives = 107/232 (46.12%), Query Frame = 0
Query:   55 PYCTAEELGIDPLSVPYIRVHPVALALITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQQHVYKDD-----PFVAAIIAPYNDQLPDHHPDIQFFRVSAQQAPLQMPYEVCYARLAQHLHPLTPHDITFPLDAFMGECYNLISEYSAFGRRVRLDKEWR 281
            P+C     G+       I+V    L  + FHAHL  TEIIG+L G   R      I +   FP R ++      TG++    VE  P S  E+   +E + MR+VGWYHSHP   FT +PS VDIENQ +YQ  ++KD+     PFV AI+ PY+++LP     I +F +S        P  + Y  +     P    D+             L  EY     R    ++WR
Sbjct:  433 PFCGQPNSGVQGCQPFAIKVQSNVLLGMDFHAHLMTTEIIGFLAGDWDR--ETRTIHIKAIFPCRSLQ------TGQN-HVNVEMDPTSEFEVRQEIEKRNMRIVGWYHSHPT--FTPDPSLVDIENQTSYQS-LFKDESMNEEPFVGAIVGPYDERLPGLSSVINWFYISQSAQERGHPKRLLYDLIEDTELPAEEADLWI----------KLFDEYRDSPERTNFKEQWR 642          
BLAST of Gvermi6117.t1 vs. uniprot
Match: M1V9P6_CYAM1 (Myb-like, SWIRM and MPN domain-containing protein 1 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V9P6_CYAM1)

HSP 1 Score: 110 bits (274), Expect = 7.850e-23
Identity = 67/167 (40.12%), Postives = 93/167 (55.69%), Query Frame = 0
Query:   62 LGIDPLSVPY-IRVHPVALALITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQQHVYKDD---PFVAAIIAPYNDQLPDHHPDIQFFRVSAQQA 224
            L  +P + P+ I V P AL ++  HAHL   E+IG+LGG      +R ++ + +AF  R       A  GR+   +VE  PES +E  N +E  G+ VV WYHSHP   F  EPS  D++NQ+NYQ+    +    PF+AAII+PY+  LP     IQ+F V    A
Sbjct:  377 LSYEPDAQPFRIVVQPRALFMMDLHAHLDLREVIGFLGGRYDT--TRKQLEIIDAFACR-------AAQGRAGHLDVELDPESAVEARNTIEVSGLAVVAWYHSHPT--FPPEPSVRDLDNQRNYQKQFESEGAPYPFLAAIISPYDPNLPSVRSAIQWFHVGLSPA 532          
BLAST of Gvermi6117.t1 vs. uniprot
Match: A0A2P6NBB5_9EUKA (Myb-like, SWIRM and MPN domain-containing protein 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBB5_9EUKA)

HSP 1 Score: 109 bits (273), Expect = 9.260e-23
Identity = 77/226 (34.07%), Postives = 110/226 (48.67%), Query Frame = 0
Query:   63 GIDPLSVPY-IRVHPVALALITFHAHLTKTEIIGYLGGFVTRVGSRPEIL-VAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQQHVYKDD----PFVAAIIAPYNDQLPDHHPDIQFFRVSAQQAPLQMPYEVCYARLAQHLHPLTPHDITFPLDAFMGECYNLISEYSAFGRRVRLDKEWRH 282
            G +    PY + VH   L +  FHAHL  TEIIGYL G   R  ++ +++ V  AFP + +  S        A  +VE  PE  I +   +E  G+RVVGWYHSHP   F  +PS  DIENQ NYQ  + +++    PFV AI++ Y+ ++P+      +F +   Q     P +V    + + L P T   +   LD            Y AF  R+  D  WR+
Sbjct:  315 GTESSGQPYRLNVHSNVLLIADFHAHLATTEIIGYLAG---RWDAKEKLITVTSAFPCKSLCTS-------GAEVQVEMDPECEIVVREEIEKSGLRVVGWYHSHPT--FQPDPSLRDIENQTNYQNFIREEETLAEPFVGAIVSSYDIRMPN------WFHIKHMQDCRGQPMQVQREIIQEDLSPETDLKLQKLLDM-----------YRAFSTRIEPDDLWRY 511          
BLAST of Gvermi6117.t1 vs. uniprot
Match: A0A2G4SG84_RHIZD (Myb-like, SWIRM and MPN domain-containing protein 1 n=3 Tax=Rhizopus microsporus TaxID=58291 RepID=A0A2G4SG84_RHIZD)

HSP 1 Score: 108 bits (269), Expect = 2.260e-22
Identity = 68/168 (40.48%), Postives = 90/168 (53.57%), Query Frame = 0
Query:   71 YIRVHPVALALITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQ----QHVYKDDPFVAAIIAPYNDQLPDHHPDIQFFRVSAQQAPLQMPYEVCY 234
            +I V    L  + FHAHL  TEIIG+L G   +   R  I+V EA+P R ++      TGR+    VE  P S IE    +E + ++VVGWYHSHP   F  +PS VDIENQ+NYQ          +PFV AI+ PY+  LP     I +F VS   +   +P  + Y
Sbjct:  268 HITVQSNVLLAMDFHAHLMTTEIIGFLAGDWDKETMR--IIVREAYPCRSIE------TGRN-DVNVEMDPTSAIETRQLIEERNLKVVGWYHSHPT--FVPDPSLVDIENQRNYQVLCRDEQASSEPFVGAIVGPYDPNLPGSASVINWFHVSNTNSERPIPKRLIY 424          
BLAST of Gvermi6117.t1 vs. uniprot
Match: I0Z548_COCSC (MPN domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z548_COCSC)

HSP 1 Score: 108 bits (270), Expect = 2.940e-22
Identity = 88/293 (30.03%), Postives = 137/293 (46.76%), Query Frame = 0
Query:   42 SNSSDRE-QRLEQLPYCTAEELGIDPLSVPY-IRVHPVALALITFHAHLTKTEIIGYLGGFVTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANRVEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQQHVYKDD---PFVAAIIAPYNDQLPDHHPDIQFFRVSAQQAPLQMPYEVCYARLAQHLHPLT----PHDITFPLDAFMGECYNLISEYSAFGRRVRLDKEWRHQVMGFVKLKRALHEIVQSAQPSEQERLYRSAV-DALVLAVEDA 324
            +NS + E Q +  +PY      G  P   P+ + V P A  ++ FHAHL  +E+IG LGG          + V  A P +++   D           VE  PE        + A+G++ VGWYHSHP   F  +PS +DI+NQ   Q+    +D    ++AAI+APY+DQLP +   + +F V+ +  P + P +V    L     P+       D    L     E   L+  Y+    R  +D+EWR+      KL+R+L   +  + P E   L+ + + DA+  A  +A
Sbjct:  393 NNSYEEEHQMVPCMPY-KGPICGGGPSCQPFRVVVAPAANLMMDFHAHLCTSEVIGILGGIWDPKSQ--VVRVTRALPVQEIAIED-------GSINVEMDPEDQFRAVQSLTAEGLKCVGWYHSHPT--FPAQPSIIDIKNQVAQQRQYRTEDGAETYLAAIVAPYDDQLPGNASQLTWFHVAYE--PGRAP-DVDQDPLQAGARPMALQWDTDDEAATLMPLQNEMQTLLQRYAPLEIRAEMDREWRNGQKRSDKLRRSLASHIPKSWPPEMTSLFLNRLSDAVSTAFNEA 670          
The following BLAST results are available for this feature:
BLAST of Gvermi6117.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3K1_9FLOR1.210e-15365.90Histone H2A deubiquitinase MYSM1 n=1 Tax=Gracilari... [more]
A0A8H7RBG9_9FUNG2.620e-2330.45Myb-like, SWIRM and MPN domain-containing protein ... [more]
A0A7J7ILM2_9RHOD4.240e-2342.18MPN domain-containing protein n=1 Tax=Cyanidiococc... [more]
A0A7S0IDA4_MICPS4.270e-2343.75Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A367K1D4_RHIST5.230e-2338.76Myb-like, SWIRM and MPN domain-containing protein ... [more]
A0A1Y2GTF5_9FUNG5.280e-2333.19Myb-like, SWIRM and MPN domain-containing protein ... [more]
M1V9P6_CYAM17.850e-2340.12Myb-like, SWIRM and MPN domain-containing protein ... [more]
A0A2P6NBB5_9EUKA9.260e-2334.07Myb-like, SWIRM and MPN domain-containing protein ... [more]
A0A2G4SG84_RHIZD2.260e-2240.48Myb-like, SWIRM and MPN domain-containing protein ... [more]
I0Z548_COCSC2.940e-2230.03MPN domain-containing protein n=1 Tax=Coccomyxa su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 21..263
e-value: 3.4E-29
score: 103.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..351
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 72..241
NoneNo IPR availableSUPERFAMILY102712JAB1/MPN domaincoord: 73..218
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 71..187
e-value: 2.2E-12
score: 47.0
IPR033497Histone H2A deubiquitinase MYSM1PANTHERPTHR12802:SF126HISTONE H2A DEUBIQUITINASE MYSM1coord: 72..241
IPR037518MPN domainPROSITEPS50249MPNcoord: 72..223
score: 12.385186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2586969..2588024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6117.t1Gvermi6117.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2586969..2588024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6117.t1 ID=Gvermi6117.t1|Name=Gvermi6117.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=352bp
MSREHPELIDLTDVAAQPLRRSTRNRKQTEPFTIHVDQRTASNSSDREQR
LEQLPYCTAEELGIDPLSVPYIRVHPVALALITFHAHLTKTEIIGYLGGF
VTRVGSRPEILVAEAFPARQVKPSDLAKTGRSAFTEVEALPESTIEIANR
VEAKGMRVVGWYHSHPDEKFTTEPSRVDIENQQNYQQHVYKDDPFVAAII
APYNDQLPDHHPDIQFFRVSAQQAPLQMPYEVCYARLAQHLHPLTPHDIT
FPLDAFMGECYNLISEYSAFGRRVRLDKEWRHQVMGFVKLKRALHEIVQS
AQPSEQERLYRSAVDALVLAVEDAWKDSSAQESERRRQNSAKRRKKRSRR
W*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
IPR033497MYSM1
IPR037518MPN