Gvermi6115.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6115.t1
Unique NameGvermi6115.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length347
Homology
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BLAST of Gvermi6115.t1 vs. uniprot
Match: A0A2V3J0M1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0M1_9FLOR)

HSP 1 Score: 109 bits (272), Expect = 2.100e-24
Identity = 75/210 (35.71%), Postives = 106/210 (50.48%), Query Frame = 0 
Query:   69 PTPP--SKYNYNTKFFSKPTFNLIFNKTIHEDAPQNVYDANADAVREALDYLDNTMFP-GTTFASNQFAQ-KLLEAFQKEEGAIFYSLKTQKWAFCAWVDLFTG-VYYMRLCASLTTFGLEDVERDPIPNKDYVTEIEMERMIYKGHVQTIDGNNTVSSTEYANTPLTTRNKISSYGDKKQKAEAFLPNAIRQNDVIDVDLSASADTYER 273
            P PP  S Y++N+  ++  TFN  FN     D P   YD     +R  L+ LD  +   G+  +     Q  LL++F+ E GAIFYS+ + +W FC W+DLF   VY++RLCA LT+FGL D+ R PI  +DYV + +M  MI          + TV++    +                  A + LPN   +  VIDV+L    DTYER
Sbjct:   24 PKPPHNSSYDFNSNNYNNFTFNAFFNSLSKPDFPGAYYDEEGPTIRWILNLLDTGLIHYGSNHSVLVLLQGSLLKSFEDETGAIFYSIHSNRWMFCGWLDLFLNEVYFLRLCAKLTSFGLTDITRIPISKEDYVLQEDMVNMIGVT-------DRTVNTKAIPD------------------ANSRLPNPATRG-VIDVNLDDYEDTYER 207
The following BLAST results are available for this feature:
BLAST of Gvermi6115.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J0M1_9FLOR2.100e-2435.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..346
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..346
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2583313..2584436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6115.t1Gvermi6115.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2583313..2584436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6115.t1 ID=Gvermi6115.t1|Name=Gvermi6115.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=347bp
MGSLSNLLMLAFLALCPLASPVVVKRLGANEIELVLRKAFGAFQKQSMAS
SKHFASHKPGGGVHRSLTPTPPSKYNYNTKFFSKPTFNLIFNKTIHEDAP
QNVYDANADAVREALDYLDNTMFPGTTFASNQFAQKLLEAFQKEEGAIFY
SLKTQKWAFCAWVDLFTGVYYMRLCASLTTFGLEDVERDPIPNKDYVTEI
EMERMIYKGHVQTIDGNNTVSSTEYANTPLTTRNKISSYGDKKQKAEAFL
PNAIRQNDVIDVDLSASADTYERTFRTKVYMTTVMRFAVIRSTLDLYIVL
GFPSSVSKRETCTTHEDLQSLNPWSLDMSPGNNNEDDHISKVHAHV*
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