Gvermi6109.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6109.t1 vs. uniprot
Match: A0A2V3J0K3_9FLOR (Transcription termination/antitermination protein NusG n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0K3_9FLOR) HSP 1 Score: 513 bits (1320), Expect = 1.770e-167 Identity = 301/608 (49.51%), Postives = 378/608 (62.17%), Query Frame = 0
Query: 160 VKPGCEQSCAISIRNMSESVD-AHIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIILLVSMSRFGYTQILRVPNVQCFMNDPNRDKKKDDPFRPPLPVKDSEMKLVFQKMTEAESGKPEVKTTVRPGDPVEITSGAYQGNKGRVTEVKPDLNIVKAELVIYGRISALELEFHQVRVIDEAQLESYLTQNEAVREKIDTETIKHESTES-EPPAAEAAVASPQHDLLQLLNDI--EDDAQDAQPVAHYNLADEHGFASASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVWQLDEGEKSAPSMFDDTDDGFEPLSDDKQGASSLIDEAEHPFNAPDDGFTEVSNTRHASKK--SAPSPANAQDARMRDDVLRGVTMCDSSCFDVNAFEDEVGFGRMLGEEERDDQAELGDAHGELEKELESMWHDVDMPKRTAQ-SETHNTAASVCSTPKDEAAANEERRVPKAGCANLARHMSAWAEEDELPLVPPEDVHRIGAEAMTQDMFAELRRVERENDRKYDMVPRGYDECEPIVEVGVETATIDIMQPSTREWLQFEEFDYEDVKRK 760
VKPGCEQSCA+SIRNMSE+V+ AHI EVLVPTTKIMRLTKGGKAV KEERFFPGYI++L++MSR+GY+QILRVPNVQCFMNDPNRDKKKD PFRPPLPVKDSEMK VF+K+ EAESGKPE KT+VRPGD VEITSG +QG KGR++EVKPDLNIVK ++VI+GRI+A+ELEFHQV+VI+E +LE+YL +N A EK + K +S E P EA +AS DL+ +LN+ + Q++ Y +E GF SA S ++WQLDEGEK AP+MFDDTDDGFEPLSD KQGASSLIDEAEHPFNAPDDGFTEV+ + K+ S P PA+ + S+ F +++V + EE + ++ EL+ +LE++ + D + +E T S P + +E R K GC +L + +++W EEDELPLVPPED R+G EA+ QD++AELRR ERE DRKY+ P YD EPIVE E +D+ +P + L+ EEF+YE+VKRK
Sbjct: 188 VKPGCEQSCAMSIRNMSEAVEEAHILEVLVPTTKIMRLTKGGKAVKKEERFFPGYILVLMAMSRYGYSQILRVPNVQCFMNDPNRDKKKDQPFRPPLPVKDSEMKTVFEKIKEAESGKPEKKTSVRPGDAVEITSGPHQGVKGRISEVKPDLNIVKTDVVIFGRITAVELEFHQVKVIEEEELEAYLMKNAADHEKAKAKPNKKSGRKSSEQPFNEAGIASSADDLMFILNETSKKQTNQESSDTLAYTFDEEDGFESAESIDDQVGEEAPKSVPAQSEPTENNDETMKSKDDQFLADLFLGEETSGGEGLLSSNEDLASFLNGEDD----ANLWQLDEGEKKAPTMFDDTDDGFEPLSDMKQGASSLIDEAEHPFNAPDDGFTEVAEAKSTKKRNVSIPPPADIGSS--------------STPFFDEVVDEDVAL-EAVDEENSNGASDEHILEAELDAKLEAVMNGTDTEVLSKDMTEYEGTGIDFESIPTEH---SEGPR--KIGCEDLPKFVTSWFEEDELPLVPPEDKARVGGEALLQDVYAELRRCEREGDRKYEFPPADYDLSEPIVEYVEELPQVDLTKPDNSK-LEVEEFNYEEVKRK 770
BLAST of Gvermi6109.t1 vs. uniprot
Match: R7QD33_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD33_CHOCR) HSP 1 Score: 228 bits (581), Expect = 3.590e-61 Identity = 108/180 (60.00%), Postives = 141/180 (78.33%), Query Frame = 0
Query: 160 VKPGCEQSCAISIRNMSESVDA-HIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIILLVSMSRFGYTQILRVPNVQCFMNDPNRDKKKDDPFRPPLPVKDSEMKLVFQKMTEAESGKPEVKTTVRPGDPVEITSGAYQGNKGRVTEVKPDLNIVKAELVIYGRISALELEFHQVRVIDE 338
VKPG EQSCAISIRNM++S++A + EVLVP TKIMRLTKGG++V KEER FPGYI++L+ M++ Y + RVPNVQ FM DPNRD+K PFRPPLPV D+EMK+VF+K+ EA S KPE KT++RPGD +E+ SG + GNKGRV VKPDL+++ A L++ GR + +E E Q+ V+ +
Sbjct: 246 VKPGFEQSCAISIRNMAQSLEALEVKEVLVPVTKIMRLTKGGQSVKKEERIFPGYILVLMVMNQQNYADVQRVPNVQWFMGDPNRDRKTGQPFRPPLPVSDAEMKIVFEKVAEAGSAKPEKKTSIRPGDAIEVLSGPFAGNKGRVLAVKPDLHVISARLMMIGREAPVEFEMDQICVVQD 425
BLAST of Gvermi6109.t1 vs. uniprot
Match: A0A2V3J0N5_9FLOR (Putative ran guanine nucleotide release factor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0N5_9FLOR) HSP 1 Score: 162 bits (409), Expect = 5.460e-42 Identity = 85/149 (57.05%), Postives = 106/149 (71.14%), Query Frame = 0
Query: 13 RALFGGAISTVVPDDFADVSRFRHVPDNQEVFAHAESDRSLIIELVQLDAAIPAAPHRTAASHHLALIAHDSGAVRATECSTQQLDVGKLAALPAADAAVSVSYALGQHAVPKLRDARAHANSVNVHVVCIRLPKFGTDVLLSFNDPVK 161
R LFGGAIST +P FADVS+ R VPDNQE+FAHA +DRSLI+EL+QL IP PH T ASHH ++IA D+ A+RA +++ L +L AL D + +S+A G H V K RD A AN+VNV+VVCIRLP TDVLL FNDP++
Sbjct: 14 RPLFGGAISTAIPPQFADVSKIRQVPDNQEIFAHAPTDRSLIVELLQLHPDIPQPPHTTPASHHFSVIATDAHALRADLAASKLLPTSQLPALLTVDPRLHLSFAHGTHVVSKFRDHTAAANTVNVYVVCIRLPNVATDVLLVFNDPIQ 162
BLAST of Gvermi6109.t1 vs. uniprot
Match: R7QCS1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCS1_CHOCR) HSP 1 Score: 127 bits (318), Expect = 1.370e-29 Identity = 73/148 (49.32%), Postives = 94/148 (63.51%), Query Frame = 0
Query: 13 RALFGGAISTVVPDDFADVSRFRHVPDNQEVFAHAESDRSLIIELVQLDAAIPAAPHRTAASHHLALIAHDSGAVRATECSTQQLDVGKLAALPAADAAVSVSYALGQHAVPKLRDARAHANSVNVHVVCIRLPKFGTDVLLSFNDPV 160
R LFGGA++ +P F DVSR R VPDNQE FAHAE+DRSLI+EL+Q + +P A H AA+ HL +A DS A+ + + L L D A+ VS A G H V K +DA + A+ VNVH+ CI LP+ TD+L+ FNDPV
Sbjct: 19 RDLFGGAMTLSLPPFFTDVSRLRGVPDNQEAFAHAETDRSLIVELLQQEHPLPVA-HTLAATFHLDELASDSAALSSNLVYSAALPPDDFPLLKQGDPALQVSVAHGVHTVAKFKDAESLASQVNVHLACITLPRVTTDLLVVFNDPV 165
BLAST of Gvermi6109.t1 vs. uniprot
Match: A0A7S0ZIK9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIK9_9RHOD) HSP 1 Score: 128 bits (322), Expect = 1.030e-28 Identity = 62/182 (34.07%), Postives = 105/182 (57.69%), Query Frame = 0
Query: 161 KPGCEQSCAISIRNMSES---VDAHIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIILLVSMSRFGYTQILRVPNVQCFMNDPNRD-----KKKDDPFRPPLPVKDSEMKLVFQKMTEAESGKPEVKTTVRPGDPVEITSGAYQGNKGRVTEVKPDLNIVKAELVIYGRISALELEFHQVR 334
K CE + S+ NM+ + V + + +V+VP +++ K G+ K E FPGY+++ +SM + Y +I RVP+VQCF+ D NR+ K + + FRPP+P+ E+ +F K+ A + PE+ + PG+ VE+ G ++G++ RVTEV + V EL ++GR S + F ++
Sbjct: 159 KFACENAVKTSLENMANNDRLVGSRLRDVVVPVKPVVKYNKAGRPTQKSELIFPGYVLVYLSMDKHCYNEISRVPHVQCFVGDQNRERELMSKSEKEMFRPPIPLGKEEVAAIFTKIQSASAKSPEIILSFSPGELVEVKDGPFKGSEARVTEVDDEKQKVTVELQVFGRESPAQFGFRSLK 340
BLAST of Gvermi6109.t1 vs. uniprot
Match: A0A0M1JW30_9CYAN (Transcription termination/antitermination protein NusG n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JW30_9CYAN) HSP 1 Score: 100 bits (249), Expect = 2.380e-20 Identity = 54/178 (30.34%), Postives = 102/178 (57.30%), Query Frame = 0
Query: 160 VKPGCEQSCAISIRNMSESVDA--HIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIILLVSMSRFGYTQILRVPNVQCFMN-DPNRDKKKDDPFRPPLPVKDSEMKLVFQKMTEAESGKPEVKTTVRPGDPVEITSGAYQGNKGRVTEVKPDLNIVKAELVIYGRISALELEFHQVR 334
V GCE+ ++ +++D I ++ +P +++ K GK + EE+ FPGY+++ ++M + + P+V F+ + R + P+P+ SE++ +F++ ++E P VKT++ PG+ +E+ SG ++ G V EV P+ + +KA L I+GR + +ELEF+QVR
Sbjct: 35 VASGCEKRVKATLEQRIQTLDIGDRIFQIEIPQVAAVKIRKDGKRMPTEEKIFPGYVLVKMAMDDESWQVVKNTPHVINFVGAEQKRSYGRGRGHVKPMPLSPSEVQRIFKQRQDSE---PVVKTSLAPGEKIEVISGPFKDFDGEVIEVSPERSKLKALLSIFGRDTPVELEFNQVR 209
BLAST of Gvermi6109.t1 vs. uniprot
Match: H2L926_ORYLA (RAN guanine nucleotide release factor n=4 Tax=Oryzias TaxID=8089 RepID=H2L926_ORYLA) HSP 1 Score: 99.8 bits (247), Expect = 2.410e-20 Identity = 72/159 (45.28%), Postives = 92/159 (57.86%), Query Frame = 0
Query: 13 RALFGGAISTVVPDDFADVSRFRHVPDNQEVFAHAESDRSLIIELV--QLDAAIPAAPHRTAASHHLALIAHDSGAVRATECSTQQLDVGKLAALPAADAAV----SVSYALGQHAVPKLRDARAHANSVNVHVVCIRLPKFGTDVLLSFNDP--VKPG 163
R LFGG++S V P + DVS FR +PDNQEVFAHA +D+SLI+ELV Q D A P AA HL IA +GAV A+E V + LP A+ ++ S A G V K + N+V VH+ RLP+F TDVL++FNDP + PG
Sbjct: 9 RPLFGGSMSAVFPSNATDVSVFRDIPDNQEVFAHAHTDQSLIVELVEYQADVADP-----DAARFHLEDIAGSNGAVGASE-------VTGVLELPRAELSLVECSSAWKATGAQRVAKFNEETR--NAVTVHLGVFRLPQFSTDVLITFNDPQSISPG 153
BLAST of Gvermi6109.t1 vs. uniprot
Match: A0A3B3DN46_ORYME (RAN guanine nucleotide release factor n=3 Tax=Oryzias TaxID=8089 RepID=A0A3B3DN46_ORYME) HSP 1 Score: 97.4 bits (241), Expect = 1.460e-19 Identity = 67/164 (40.85%), Postives = 94/164 (57.32%), Query Frame = 0
Query: 13 RALFGGAISTVVPDDFADVSRFRHVPDNQEVFAHAESDRSLIIELVQLDAAIPAAPHRTAASHHLALIAHDSGAVRATECSTQQLDVGKLAALPAADAAVSVSYAL----GQHAVPKLRDARAHANSVNVHVVCIRLPKFGTDVLLSFNDP--VKPGCEQSCAI 170
R LFGGA+S P + DVS R +PDNQEVF HA++D+SLI+ELV+ A + + AA +HL IA +G V A+E + G L LP A+ +S + G V K + N+V VH+ IRLP+F TDVL++FNDP + PG + ++
Sbjct: 7 RPLFGGAMSAAFPSNATDVSVLRDIPDNQEVFVHAQTDQSLIVELVEYQADVA---DQDAARYHLEDIACSNGVVGASEVT------GALE-LPKAELCLSECRSAWMITGAQCVSKFNEEAR--NAVTVHLGVIRLPQFSTDVLVTFNDPQSISPGSSSAASV 158
BLAST of Gvermi6109.t1 vs. uniprot
Match: A0A2R5GLU9_9STRA (Ran guanine nucleotide release factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLU9_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.280e-18 Identity = 65/174 (37.36%), Postives = 100/174 (57.47%), Query Frame = 0
Query: 12 RRALFGGAISTVVPDDFADVSRFRHVPDNQEVFAHAESDRSLIIELVQLDAAIPAAPHRTAASHHLALIAHDSGAVRATECSTQQLDVGKLAALPA----ADAAVSVSYALGQHAVPKLRDARAHANSVNVHVVCIRLPKFGTDVLLSFNDPVKPGCEQSCAISIRNMSESVDA 181
+R LFGGAI+ +P FADVS R VPD+QEVFA +DRS+I+E+++L A+ + TA + +A +G+ AT ++ V ++P AD A + + +G V K R++ N++ V + IRLPK+ TD+L+S N PVK E S A S++ ++DA
Sbjct: 31 KRELFGGAITASLPAAFADVSTVREVPDHQEVFADQNTDRSIIVEVLELTAS---ESNETAGKYFFEDLAGANGS-EATVIEYSEVGV-PATSVPCLDKVADPAAASNVVIGTQVVAKFRESAK--NTIRVFLCNIRLPKYTTDILISLNAPVKVSAESSSAASLQAAGAALDA 197
BLAST of Gvermi6109.t1 vs. uniprot
Match: A0A6J2WWL5_CHACN (ran guanine nucleotide release factor n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WWL5_CHACN) HSP 1 Score: 92.8 bits (229), Expect = 5.720e-18 Identity = 61/162 (37.65%), Postives = 97/162 (59.88%), Query Frame = 0
Query: 13 RALFGGAISTVVPDDFADVSRFRHVPDNQEVFAHAESDRSLIIELVQLDAAIPAAPHRTAASHHLALIAHDSGAVRATECSTQQLDVGKLAALPAADAAV---SVSYAL-GQHAVPKLRDARAHANSVNVHVVCIRLPKFGTDVLLSFNDPVKPGCEQSCAI 170
R LFGGA+S V+P D+S R +PDNQEVFAH+++D+S+IIEL++ + + AA +H +A G+ +ATE + + V + ALP ++ ++ S ++ L G + K + N+VN+H+ RLP+F TD+L++FNDPV S A+
Sbjct: 3 RPLFGGALSAVIPHSARDISELRQIPDNQEVFAHSQTDQSVIIELLEYQSHVN---DSDAARYHFEDVA---GSNKATEAGSWE--VRSVEALPKSELSLQECSSAWLLSGAQLISKFNEEAK--NTVNIHLGLFRLPQFTTDILVTFNDPVSISPLSSSAV 154 The following BLAST results are available for this feature:
BLAST of Gvermi6109.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6109.t1 ID=Gvermi6109.t1|Name=Gvermi6109.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=790bpback to top |