Gvermi6028.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6028.t1
Unique NameGvermi6028.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length334
Homology
BLAST of Gvermi6028.t1 vs. uniprot
Match: A0A2V3IEL6_9FLOR (Chaperone protein ClpB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEL6_9FLOR)

HSP 1 Score: 422 bits (1085), Expect = 1.590e-145
Identity = 206/316 (65.19%), Postives = 254/316 (80.38%), Query Frame = 0
Query:    9 SLSSGNRDAFEQLLAYPYVYCISDRVQDNVSFPFEGYDEVLDETLQAISKGNSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGD-SEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEACDVARSRIGDGEGSEESSTSXSVSVKRSHVERLIYNWCGVTVRQTGE 323
            S SSGN +AFEQLL  PYVYCIS RV +   FPFE YD+V+DETL+AI  GNSVLLVGEPGIGKRS+SLGLARRL S++ ++ NP+YSR+VYTLSLGNYFWSG  S + ++MQQ++  V S VE AGPEHIVLCIDD+DI GFVDR+V+E  +A++ +   SLEN LRFLLFDKKV+CLCTCIRSAYKRLI+SDTYYDEKFTKAFRVIHMKPPN S+SL+I+ AHK+RIE E+  SITD A+ ++V CAD+Y++HRA+PEKA+D+L+ AC + R+        ++SS+S  V V R  VE LI+ WCGVTV+   E
Sbjct:   11 SSSSGNFEAFEQLLTIPYVYCISHRVGELEQFPFEAYDDVIDETLKAICNGNSVLLVGEPGIGKRSLSLGLARRLASLRKESGNPLYSRTVYTLSLGNYFWSGGGSNNIKEMQQNVRNVFSLVEEAGPEHIVLCIDDIDILGFVDRLVNETGEASQSKQLFSLENTLRFLLFDKKVLCLCTCIRSAYKRLIDSDTYYDEKFTKAFRVIHMKPPNASVSLQILKAHKSRIEVENNASITDEAVVSTVHCADRYLSHRAMPEKAIDVLSAACSLVRTNKCKNTEPDKSSSSTEVVVDRKDVESLIHAWCGVTVQHDAE 326          
BLAST of Gvermi6028.t1 vs. uniprot
Match: R7QL59_CHOCR (AAA_lid_9 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL59_CHOCR)

HSP 1 Score: 280 bits (717), Expect = 5.300e-89
Identity = 151/315 (47.94%), Postives = 203/315 (64.44%), Query Frame = 0
Query:   26 YVYCISDRVQDNVSFPFEGYDEVLDETLQAISKGNSVLLVGEPGIGKRSVSLGLARRLKSM-KTDAKNPIYSRSVYTLSLGNYFWS-GDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSE----------GDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEACDVARSR--------IGDGEGSEESSTSXSVSVKRSHVERLIYNWCGVTVRQ 320
            YV CISDRV     +PFEG +E++++ +++I  G SVL+VGEPG GKR++SLGLARR   + K D KN ++SR V TL+LG  FW  G  +D  ++Q+ I EVL  VE AGPE+IV CIDDVDI  FVD++  +          G    ++   IS ENMLR+LLF++KV+CLCTCIR AY+RLI SDT+YDEKFTK FRV+HM  P+V+ +L+IV AH+ RIE E  V + D  ++A+   A  Y+THR +PE ALDI+ EA   A ++        IG   G  ++ T     V +  V+ LI  WCG +  Q
Sbjct:   61 YVECISDRVDMRDRYPFEGNEEIMEQVMKSILSGGSVLVVGEPGRGKRTLSLGLARRFADLQKQDPKNSLHSRQVSTLALGPSFWDHGSQDDICKVQKQIQEVLRLVEAAGPENIVFCIDDVDILSFVDKLAQKQSPVYGSPLSGPTGGQDNSEISSENMLRYLLFNRKVVCLCTCIRGAYQRLIYSDTFYDEKFTKTFRVLHMPEPSVAQTLQIVRAHRKRIETECGVVLLDEGLSAATAYAKHYLTHREMPESALDIVYEASKAAATQATAERDVAIGQSTGGAKTLTV----VGKERVDELIKEWCGYSGEQ 371          
BLAST of Gvermi6028.t1 vs. uniprot
Match: A0A359BCW0_9FIRM (AAA domain-containing protein (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A359BCW0_9FIRM)

HSP 1 Score: 117 bits (293), Expect = 4.710e-27
Identity = 73/250 (29.20%), Postives = 137/250 (54.80%), Query Frame = 0
Query:   30 ISDRVQDNVSFPFEGYDEVLDETLQAISKG--NSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEAC 277
            ++D V+D    P  G D+ + + +Q +S+   N+V+L+GEPG+GK ++  GLA R+  +K D    +  + VY L +G+      ++   + ++ +  VL++++ +  + I+L ID++ +      IV  G    K    +   NML+ +L   ++ C+     + Y+  IE D   + +F    + + +  P V+ ++ I+   K R E  H V ITDGA+ A+   +++Y+T+R LP+KA+D+L EAC
Sbjct:   25 VNDAVRDGKLDPVIGRDDEIRKVVQVLSRKTKNNVILLGEPGVGKTAIVEGLAERI--VKNDVPASLQGKEVYELDMGSLV--AGAKYRGEFEERLKAVLNKIKESNGK-IILFIDEIHL------IVGAG----KSDGALDASNMLKPMLARGEIDCIGATTLNEYREYIEKDRALERRF----QPVMVGEPTVADTISILRGLKERFESFHGVRITDGALVAAATLSNRYITNRFLPDKAIDLLDEAC 255          
BLAST of Gvermi6028.t1 vs. uniprot
Match: UPI001C0F42A2 (ATP-dependent chaperone ClpB n=1 Tax=Pseudoflavonifractor sp. MSJ-37 TaxID=2841531 RepID=UPI001C0F42A2)

HSP 1 Score: 116 bits (290), Expect = 5.450e-25
Identity = 72/255 (28.24%), Postives = 142/255 (55.69%), Query Frame = 0
Query:   32 DRVQDNVSFPFEGYDEVLDETLQAISKG--NSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEACDVARSRI 284
            +R + N   P  G D+ +   ++ +S+   N+ +L+GEPG+GK +++ GLA+R+  +K D  NP+  ++++ L +G+      ++   + ++ +  VL++V+++  + I+L ID++        IV  G    K +  +   N+L+ +L   ++ C+     + Y++ IE D   + +F    + + +  P+V  ++ I+   K R E  H V ITD AI A+   +D+Y+T R LP+KA+D++ EAC + R+ I
Sbjct:  174 ERARQNKLDPVIGRDDEIRNVIRILSRKSKNNPVLIGEPGVGKTAIAEGLAQRI--VKGDVPNPLKDKTIFALDMGSLI--AGAKYRGEFEERLKAVLNEVKKSEGK-IILFIDELH------TIVGAG----KTEGAMDAGNLLKPMLARGELHCIGATTLNEYRQYIEKDAALERRF----QTVMVNEPSVEDTIAILRGLKERYEVFHGVKITDSAIIAAATLSDRYITDRFLPDKAIDLVDEACAMIRTEI 409          
BLAST of Gvermi6028.t1 vs. uniprot
Match: A0A1V5I029_9BACT (Chaperone protein ClpB n=1 Tax=Tenericutes bacterium ADurb.BinA155 TaxID=1852922 RepID=A0A1V5I029_9BACT)

HSP 1 Score: 115 bits (287), Expect = 1.200e-24
Identity = 71/257 (27.63%), Postives = 139/257 (54.09%), Query Frame = 0
Query:   30 ISDRVQDNVSFPFEGYDEVLDETLQAISKG--NSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEACDVARSRI 284
            + D V++    P  G DE + + ++ +++   N+V+L+GEPG+GK ++  GLA R+  +K D    + ++ +Y L +G       ++   + ++ +  VL++++ +  + I+L ID++ +      IV  G    K    +   NML+ LL   ++ C+     + Y+  IE D   + +F    + + +  P V  ++ I+   K R E  H VSITDGA+ A+   +++Y+T+R LP+KA+D++ EAC   + ++
Sbjct:   25 VCDAVRNGKLDPVIGRDEEIRKVVEVLARKTKNNVILIGEPGVGKTAIVEGLAERI--VKNDVPTTLANKEIYELDMGALV--AGAKYRGEFEERLKAVLNKIKDSNHQ-IILFIDEIHL------IVGAG----KADGALDASNMLKPLLARGEIDCIGATTLNEYREYIEKDRALERRF----QTVLVGEPTVEDTITILRGLKERFESYHGVSITDGALIAAATLSNRYITNRFLPDKAIDLIDEACATIKVQV 262          
BLAST of Gvermi6028.t1 vs. uniprot
Match: K1LLY0_9LACT (Chaperone protein ClpB n=2 Tax=Falseniella ignava TaxID=137730 RepID=K1LLY0_9LACT)

HSP 1 Score: 114 bits (284), Expect = 3.300e-24
Identity = 75/278 (26.98%), Postives = 147/278 (52.88%), Query Frame = 0
Query:    9 SLSSGNRDAFEQLLAYPYVYCISDRVQDNVSFPFEGYDEVLDETLQAISKG--NSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEACDVARSRI 284
            S++S N++A    L   Y   +++ ++ N S P  G DE + + ++ +S+   N+ +L+G+PG+GK ++  GLA+R+  ++ D    +  + +Y+L +G       ++   + ++ +  VL +V+ A  E I+L ID++        IV  G    K +  +   N+L+ +L   ++ C+       Y++  E D   + +F +    + +K PNV  ++ I+   K R E  H V+I D A+  + + +D+Y+T R LP+KA+D++ EAC   R  +
Sbjct:  148 SVNSPNQEATYDALKQ-YAINLNEAMKSNKSDPIIGRDEEIRDVIRILSRKTKNNPILIGDPGVGKTAIIEGLAQRI--IRNDVPENLKGKVIYSLDMGALI--AGAKYRGEFEERLKAVLKEVKNADGE-IILFIDEIH------TIVGAG----KTEGSMDAGNLLKPMLARGELHCIGATTIEEYRQNFEKDKALERRFQR----VMVKEPNVEDTISILRGLKERFEIHHGVNIHDNALVGAAVLSDRYITDRFLPDKAIDLVDEACATIRMEL 405          
BLAST of Gvermi6028.t1 vs. uniprot
Match: A0A1X7I6L5_9BACT (Chaperone protein ClpB n=1 Tax=Dethiosulfovibrio salsuginis TaxID=561720 RepID=A0A1X7I6L5_9BACT)

HSP 1 Score: 113 bits (283), Expect = 4.470e-24
Identity = 75/255 (29.41%), Postives = 136/255 (53.33%), Query Frame = 0
Query:   32 DRVQDNVSFPFEGYDEVLDETLQAISKG--NSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEACDVARSRI 284
            D+ +     P  G DE +   ++ +S+   N+ +L+GEPG+GK +++ GLA+R+  +K D  + +   SV+ L +G       ++   + ++ +  VL++V R     I+L ID++        IV  G    K +  +   NML+ +L   ++ C+       Y+R IE D   + +F    + + + PP+V  ++ I+   + R +  H V ITD A+ ASV  +D+Y+T R LP+KA+D++ EAC + R+ I
Sbjct:  174 DQAEKGKLDPVIGRDEEILRVIRILSRKTKNNPVLIGEPGVGKTAIAEGLAQRI--LKGDVPDGLKDHSVFALDIGALL--AGAKFRGEFEERLKAVLNEV-RESDGRILLFIDELH------TIVGAG----KSEGSMDAGNMLKPMLARGELHCIGATTLDEYRRYIEKDAALERRF----QPVIVDPPSVEDAISILRGLRERFQVHHGVRITDSALVASVELSDRYITDRFLPDKAIDLIDEACAMLRTEI 409          
BLAST of Gvermi6028.t1 vs. uniprot
Match: A0A351Y9K8_9FIRM (ATP-dependent chaperone ClpB n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A351Y9K8_9FIRM)

HSP 1 Score: 112 bits (279), Expect = 1.350e-23
Identity = 69/250 (27.60%), Postives = 135/250 (54.00%), Query Frame = 0
Query:   30 ISDRVQDNVSFPFEGYDEVLDETLQAISKG--NSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEAC 277
            ++  V+     P  G DE + + +Q +++   N+V+L+GEPG+GK ++  GLA R+  +K D  N +  + +Y L +G       ++   + ++ +  VL++++++  + I+L ID++ +      IV  G    +    +   NML+ +L   ++ C+     + Y+  IE D   + +F    + + +  P V  ++ I+   K R E  H V ITDGA+ A+   +++Y+T+R LP+KA+D++ EAC
Sbjct:   25 VNKEVKSGKIDPVIGRDEEIRKVIQILARKTKNNVILIGEPGVGKTAIVEGLAERI--VKDDVPNTLKDKEIYELDMGALV--AGAKYRGEFEERLKAVLNKIKQSDGK-IILFIDEIHL------IVGAG----RTDGALDASNMLKPMLARGEIDCIGATTLNEYREYIEKDRALERRF----QTVLVGEPTVEDTITILRGLKERFESYHGVQITDGALIAAATLSNRYITNRFLPDKAIDLVDEAC 255          
BLAST of Gvermi6028.t1 vs. uniprot
Match: A0A847B434_9FIRM (AAA domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium TaxID=2049044 RepID=A0A847B434_9FIRM)

HSP 1 Score: 111 bits (278), Expect = 1.800e-23
Identity = 72/257 (28.02%), Postives = 138/257 (53.70%), Query Frame = 0
Query:   30 ISDRVQDNVSFPFEGYDEVLDETLQAISKG--NSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEACDVARSRI 284
            I++  +D    P  G DE + + +Q +S+   N+V+++GEPG+GK ++  GLA+R+  +K D    +  + +Y L +G       ++   + ++ +  VL++++ +  + I+L ID++ +      IV  G    +    +   NML+ +L   ++ C+     + Y++ IE D   + +F    + + ++ P+   S+ I+   K R E  H V ITD AI A+V  + +Y+T+R LP+KA+D++ EAC   R  I
Sbjct:   21 ITEEARDGKIDPVIGRDEEIRKIIQILSRKTKNNVIMLGEPGVGKTAILEGLAQRI--IKADIPASLKDKDIYELDMGALV--AGAKYRGEFEERLKAVLNKIKESEGK-IILFIDEIHL------IVGAG----RSDGALDASNMLKPMLARGEIDCIGATTLNEYRQYIEKDRALERRF----QTVLVEEPSPEDSISILRGLKERFETHHGVKITDQAIVAAVTLSTRYITNRFLPDKAIDLIDEACASIRVEI 258          
BLAST of Gvermi6028.t1 vs. uniprot
Match: A0A7X8CHH5_9FIRM (AAA domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium TaxID=2049044 RepID=A0A7X8CHH5_9FIRM)

HSP 1 Score: 111 bits (278), Expect = 1.810e-23
Identity = 70/257 (27.24%), Postives = 135/257 (52.53%), Query Frame = 0
Query:   30 ISDRVQDNVSFPFEGYDEVLDETLQAISKG--NSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVYTLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGFVDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIESDTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIAASVMCADQYVTHRALPEKALDILTEACDVARSRI 284
            + D  + N S P  G DE +   +Q +S+   N+V+L+GE G+GK ++  GLA+R+   + D    I ++ VY L +G+      ++   + ++ +  +L++++ +  + I+L +D++ +     R+    D +N          ML+ LL   ++  +     + Y+  IE D   + +F    + + +K P +  S+ I+   K R E  H V I+D A+ ++V  +D+Y+T R LP+KALD++ EAC   R ++
Sbjct:   23 LDDEARQNKSDPIIGRDEEIRRIIQILSRKTKNNVILIGEAGVGKTAIIEGLAQRIA--RGDVPESIKNKRVYELDMGSLI--AGTKFRGEFEERLKAILNKIKESDHQ-IILFVDEIHLIVGAGRVDGAMDASN----------MLKPLLARGEIDMIGATTLNEYRNYIEKDRALERRF----QPLLVKEPTLEDSISILRGLKERYETHHGVKISDSALVSAVTLSDRYITDRFLPDKALDLIDEACAAIRVQV 260          
The following BLAST results are available for this feature:
BLAST of Gvermi6028.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IEL6_9FLOR1.590e-14565.19Chaperone protein ClpB n=1 Tax=Gracilariopsis chor... [more]
R7QL59_CHOCR5.300e-8947.94AAA_lid_9 domain-containing protein n=1 Tax=Chondr... [more]
A0A359BCW0_9FIRM4.710e-2729.20AAA domain-containing protein (Fragment) n=1 Tax=F... [more]
UPI001C0F42A25.450e-2528.24ATP-dependent chaperone ClpB n=1 Tax=Pseudoflavoni... [more]
A0A1V5I029_9BACT1.200e-2427.63Chaperone protein ClpB n=1 Tax=Tenericutes bacteri... [more]
K1LLY0_9LACT3.300e-2426.98Chaperone protein ClpB n=2 Tax=Falseniella ignava ... [more]
A0A1X7I6L5_9BACT4.470e-2429.41Chaperone protein ClpB n=1 Tax=Dethiosulfovibrio s... [more]
A0A351Y9K8_9FIRM1.350e-2327.60ATP-dependent chaperone ClpB n=1 Tax=Firmicutes ba... [more]
A0A847B434_9FIRM1.800e-2328.02AAA domain-containing protein n=1 Tax=Erysipelotri... [more]
A0A7X8CHH5_9FIRM1.810e-2327.24AAA domain-containing protein n=1 Tax=Erysipelotri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041546ClpA/ClpB, AAA lid domainPFAMPF17871AAA_lid_9coord: 225..292
e-value: 6.4E-13
score: 48.5
NoneNo IPR availableGENE3D1.10.8.60coord: 222..315
e-value: 3.2E-16
score: 61.0
NoneNo IPR availablePANTHERPTHR11638ATP-DEPENDENT CLP PROTEASEcoord: 41..320
NoneNo IPR availableCDDcd00009AAAcoord: 46..199
e-value: 8.51596E-5
score: 40.2071
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 62..191
e-value: 2.7E-4
score: 21.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 16..221
e-value: 6.3E-22
score: 79.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 42..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1820377..1821378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6028.t1Gvermi6028.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1820377..1821378 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6028.t1 ID=Gvermi6028.t1|Name=Gvermi6028.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=334bp
MEGENDQLSLSSGNRDAFEQLLAYPYVYCISDRVQDNVSFPFEGYDEVLD
ETLQAISKGNSVLLVGEPGIGKRSVSLGLARRLKSMKTDAKNPIYSRSVY
TLSLGNYFWSGDSEDARQMQQSISEVLSQVERAGPEHIVLCIDDVDIFGF
VDRIVSEGDQANKEQHPISLENMLRFLLFDKKVICLCTCIRSAYKRLIES
DTYYDEKFTKAFRVIHMKPPNVSISLRIVAAHKTRIEQEHQVSITDGAIA
ASVMCADQYVTHRALPEKALDILTEACDVARSRIGDGEGSEESSTSTSVS
VKRSHVERLIYNWCGVTVRQTGEYLSSTSTSNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041546ClpA/ClpB_AAA_lid
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase