Gvermi5956.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5956.t1
Unique NameGvermi5956.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length589
Homology
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BLAST of Gvermi5956.t1 vs. uniprot
Match: A0A2V3IMA5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMA5_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 8.040e-36
Identity = 203/630 (32.22%), Postives = 261/630 (41.43%), Query Frame = 0 
Query:    5 TTTNSQPQASAPLAAHAFHPDIQFPQITWEDITAAIDLAKSAPTSKLPDIPLSSLFNPSHSSAPPSSRPSGQTRSQHQRPHQQNGNGPQHSSSIPPAFSPSLQAGLKPQTAIVRPPPHTDKPVRPIALETNKQPAK-SKRKTKKPRRNSEAGNGSKQTAPAPGNIQTARQDPQAKPQTREHEEESDANWHAARQQHSQQPRELLLQTPEMPQRQPSQLQQIYPPKAIQQQVLXXXXXXXXXXXXXXXXXXHPATENTPNQELSGQRQPSNW-----------------SNAPTTSCGRVTVPPP-------------STNLLPPAQLLPFLTAAYQSYQANAQKSQAQQNQMPFWPQGQLPFSIQELSAAVQAAQQQAKG-AKSCVPQAQPTDMQG-PAAKDVPCHARSQFVGMQGYNEEKPQELKERPLPVNGGIQKESMRGNAYQNWRKHSFP----------PQPNRN--RWMREAQETWGSALHRRPDGSFHPADNAILRRHMGGRNSMPNTYLEPNMNMVQNLHMGPPGNVTPNRMMHYNRGAGPNRNMPQRRPWQPWRGGRSRGR-------------GRRRNVGRRPNGRRDEGPNPPGMPMGMTHGAYNLQHAVKQETMVNA 576
            +T  ++P  S P   HA  P    PQ+TW+DITAAIDL+K AP   + D+PLSSLF  S    PPS             P QQN   P  SS   P            Q    RP P ++ P  PI  + + +P    KRK KKPRR+SE  +      P    +Q+   D  A+P        S+A+  A                  +  R P                 XXXXXXXXXXXXXXXX   P  ++    +   Q+QP+                   SNAP      V +PPP                      LLP L AA+  YQ+  Q+S   Q  M  WP     + + E+SAA+QAAQQQA    K  + Q  P      PAAKDVPCH+ S+ +G    +  K +  K   LP    I+K   R +A  +WRKHS P          PQ N +   W+R A   WG+ALH+R DGSF P                                  PP  V   R +  ++   P R +P +RPWQP RG R                 G RRN   RPN       NP G+P+GMTHG +     VKQE+ V++
Sbjct:    2 STNTAKPNPSPPEHPHAGMP---IPQLTWDDITAAIDLSKVAPPQAIHDLPLSSLFT-SVQPLPPSQS----------NPIQQN---PPASSPAQPXXXXXXXXXXXXQQVAARPLPPSETPAYPIHNDAHAKPLPCQKRKPKKPRRHSEPPSKQNPATPPTPILQSEPFDKPAQP--------SNASDPA-----------------NLNNRNPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQPLQQHDAQGKHIHQQQPAQQLLRPQQHPFQHRFNDGQSNAPA-----VHLPPPVPAPTXXXXXXXXXXXXXXXXNLLPLLNAAFHDYQSGGQQSSHMQQNMTHWPYQLAGYGLSEISAAIQAAQQQASQLVKPNLAQQSPAQRPASPAAKDVPCHSTSKLLGSTRDDSAKCRNNKR--LPPAPHIRKRGARSSASSDWRKHSVPTTAXXXXXXTPQHNIDPVEWLRRAHAIWGAALHQRADGSFAP--------------------------------QAPPPPVV--RHIVADKNTQPYRGLPPKRPWQPRRGNRGXXXXXXXXXXXRQGPGGGRRNHQWRPND-----SNPYGLPLGMTHGPHRFHSFVKQESSVDS 543
The following BLAST results are available for this feature:
BLAST of Gvermi5956.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMA5_9FLOR8.040e-3632.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 501..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1427933..1429699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5956.t1Gvermi5956.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1427933..1429699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5956.t1 ID=Gvermi5956.t1|Name=Gvermi5956.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=589bp
MSNNTTTNSQPQASAPLAAHAFHPDIQFPQITWEDITAAIDLAKSAPTSK
LPDIPLSSLFNPSHSSAPPSSRPSGQTRSQHQRPHQQNGNGPQHSSSIPP
AFSPSLQAGLKPQTAIVRPPPHTDKPVRPIALETNKQPAKSKRKTKKPRR
NSEAGNGSKQTAPAPGNIQTARQDPQAKPQTREHEEESDANWHAARQQHS
QQPRELLLQTPEMPQRQPSQLQQIYPPKAIQQQVLQSQQKQDQEPAHLQQ
TVPHPATENTPNQELSGQRQPSNWSNAPTTSCGRVTVPPPSTNLLPPAQL
LPFLTAAYQSYQANAQKSQAQQNQMPFWPQGQLPFSIQELSAAVQAAQQQ
AKGAKSCVPQAQPTDMQGPAAKDVPCHARSQFVGMQGYNEEKPQELKERP
LPVNGGIQKESMRGNAYQNWRKHSFPPQPNRNRWMREAQETWGSALHRRP
DGSFHPADNAILRRHMGGRNSMPNTYLEPNMNMVQNLHMGPPGNVTPNRM
MHYNRGAGPNRNMPQRRPWQPWRGGRSRGRGRRRNVGRRPNGRRDEGPNP
PGMPMGMTHGAYNLQHAVKQETMVNAGSSMVENNIVPS*
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