Gvermi5956.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5956.t1
Unique Name	Gvermi5956.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	589

Homology

[Close]

BLAST of Gvermi5956.t1 vs. uniprot
Match: A0A2V3IMA5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMA5_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 8.040e-36
Identity = 203/630 (32.22%), Postives = 261/630 (41.43%), Query Frame = 0

Query:    5 TTTNSQPQASAPLAAHAFHPDIQFPQITWEDITAAIDLAKSAPTSKLPDIPLSSLFNPSHSSAPPSSRPSGQTRSQHQRPHQQNGNGPQHSSSIPPAFSPSLQAGLKPQTAIVRPPPHTDKPVRPIALETNKQPAK-SKRKTKKPRRNSEAGNGSKQTAPAPGNIQTARQDPQAKPQTREHEEESDANWHAARQQHSQQPRELLLQTPEMPQRQPSQLQQIYPPKAIQQQVLXXXXXXXXXXXXXXXXXXHPATENTPNQELSGQRQPSNW-----------------SNAPTTSCGRVTVPPP-------------STNLLPPAQLLPFLTAAYQSYQANAQKSQAQQNQMPFWPQGQLPFSIQELSAAVQAAQQQAKG-AKSCVPQAQPTDMQG-PAAKDVPCHARSQFVGMQGYNEEKPQELKERPLPVNGGIQKESMRGNAYQNWRKHSFP----------PQPNRN--RWMREAQETWGSALHRRPDGSFHPADNAILRRHMGGRNSMPNTYLEPNMNMVQNLHMGPPGNVTPNRMMHYNRGAGPNRNMPQRRPWQPWRGGRSRGR-------------GRRRNVGRRPNGRRDEGPNPPGMPMGMTHGAYNLQHAVKQETMVNA 576
            +T  ++P  S P   HA  P    PQ+TW+DITAAIDL+K AP   + D+PLSSLF  S    PPS             P QQN   P  SS   P            Q    RP P ++ P  PI  + + +P    KRK KKPRR+SE  +      P    +Q+   D  A+P        S+A+  A                  +  R P                 XXXXXXXXXXXXXXXX   P  ++    +   Q+QP+                   SNAP      V +PPP                      LLP L AA+  YQ+  Q+S   Q  M  WP     + + E+SAA+QAAQQQA    K  + Q  P      PAAKDVPCH+ S+ +G    +  K +  K   LP    I+K   R +A  +WRKHS P          PQ N +   W+R A   WG+ALH+R DGSF P                                  PP  V   R +  ++   P R +P +RPWQP RG R                 G RRN   RPN       NP G+P+GMTHG +     VKQE+ V++
Sbjct:    2 STNTAKPNPSPPEHPHAGMP---IPQLTWDDITAAIDLSKVAPPQAIHDLPLSSLFT-SVQPLPPSQS----------NPIQQN---PPASSPAQPXXXXXXXXXXXXQQVAARPLPPSETPAYPIHNDAHAKPLPCQKRKPKKPRRHSEPPSKQNPATPPTPILQSEPFDKPAQP--------SNASDPA-----------------NLNNRNPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQPLQQHDAQGKHIHQQQPAQQLLRPQQHPFQHRFNDGQSNAPA-----VHLPPPVPAPTXXXXXXXXXXXXXXXXNLLPLLNAAFHDYQSGGQQSSHMQQNMTHWPYQLAGYGLSEISAAIQAAQQQASQLVKPNLAQQSPAQRPASPAAKDVPCHSTSKLLGSTRDDSAKCRNNKR--LPPAPHIRKRGARSSASSDWRKHSVPTTAXXXXXXTPQHNIDPVEWLRRAHAIWGAALHQRADGSFAP--------------------------------QAPPPPVV--RHIVADKNTQPYRGLPPKRPWQPRRGNRGXXXXXXXXXXXRQGPGGGRRNHQWRPND-----SNPYGLPLGMTHGPHRFHSFVKQESSVDS 543

The following BLAST results are available for this feature:

BLAST of Gvermi5956.t1 vs. uniprot

BLAST of Gvermi5956.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IMA5_9FLOR	8.040e-36	32.22	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 501..561
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_1708	contig	ScGOVlb_1708:1427933..1429699 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5956.t1	Gvermi5956.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_1708 1427933..1429699 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5956.t1 ID=Gvermi5956.t1|Name=Gvermi5956.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=589bp
MSNNTTTNSQPQASAPLAAHAFHPDIQFPQITWEDITAAIDLAKSAPTSK
LPDIPLSSLFNPSHSSAPPSSRPSGQTRSQHQRPHQQNGNGPQHSSSIPP
AFSPSLQAGLKPQTAIVRPPPHTDKPVRPIALETNKQPAKSKRKTKKPRR
NSEAGNGSKQTAPAPGNIQTARQDPQAKPQTREHEEESDANWHAARQQHS
QQPRELLLQTPEMPQRQPSQLQQIYPPKAIQQQVLQSQQKQDQEPAHLQQ
TVPHPATENTPNQELSGQRQPSNWSNAPTTSCGRVTVPPPSTNLLPPAQL
LPFLTAAYQSYQANAQKSQAQQNQMPFWPQGQLPFSIQELSAAVQAAQQQ
AKGAKSCVPQAQPTDMQGPAAKDVPCHARSQFVGMQGYNEEKPQELKERP
LPVNGGIQKESMRGNAYQNWRKHSFPPQPNRNRWMREAQETWGSALHRRP
DGSFHPADNAILRRHMGGRNSMPNTYLEPNMNMVQNLHMGPPGNVTPNRM
MHYNRGAGPNRNMPQRRPWQPWRGGRSRGRGRRRNVGRRPNGRRDEGPNP
PGMPMGMTHGAYNLQHAVKQETMVNAGSSMVENNIVPS*