Gvermi5948.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5948.t1
Unique Name	Gvermi5948.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	178

Homology

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BLAST of Gvermi5948.t1 vs. uniprot
Match: A0A2V3IZU4_9FLOR (NAM-associated domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZU4_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 6.120e-37
Identity = 84/164 (51.22%), Postives = 108/164 (65.85%), Query Frame = 0

Query:    4 GVESVKNDLQNTSNQHALLSDKVGAQSVRHNTDSGSDGYLKSLKKKTYRPVGRKQAKNEQYREKYNETKLRLAAQSVETEKERNRLLNRNYEIMLNTSAPVGCDTAESVEYIKIMRARALAEVRASCEKWRSENYQPTEFFNSEASHTKEGVTAALRSDSLMSS 167
            G++SV+  +   S+   L SD +   +  + TD+GSD  +   KK T RPVGRK AK E+ REKYNETKLR AAQS+E   ERNRLL RNYEIML TSAP GCD ++ +EY KIMRA AL E+R +C+K RS++   TE  NS+ S   EG      S+ ++SS
Sbjct:   52 GIKSVEMGIHKFSSHSNLGSDNMCEDANLNTTDTGSDLNISPPKKPTGRPVGRKHAKVERSREKYNETKLRFAAQSMEAVVERNRLLKRNYEIMLLTSAPDGCDISDLLEYFKIMRAHALEELRVACKKQRSDSDSQTEVCNSQRS---EGTDDFHSSNPVLSS 212

[Close]

BLAST of Gvermi5948.t1 vs. uniprot
Match: A0A2V3J514_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J514_9FLOR)

HSP 1 Score: 61.6 bits (148), Expect = 6.800e-9
Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 0

Query:   30 SVRHNTDSGSDGYLKSLKK---KTYRPVGRKQAKNEQYREKYNETKLRLAAQSVETEKERNRLLNRNYEIMLNTSAPVGCDTAESVEYIKIMRARALAEVR 127
            S++   D+ S G  KS +K   +  RP  R +AK    + K  E K+RLA +SV  + ERN  L R+YEI+L  +A    D A+SVEYIK MR RAL E R
Sbjct:   23 SIKLENDTLSSGKTKSEEKDAEQKIRPTARWKAKELLRKLKQTEKKMRLAEESVAAQVERNAALKRHYEILLFKNALEVYDKADSVEYIKPMRYRALKEPR 123

The following BLAST results are available for this feature:

BLAST of Gvermi5948.t1 vs. uniprot

BLAST of Gvermi5948.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IZU4_9FLOR	6.120e-37	51.22	NAM-associated domain-containing protein n=1 Tax=G...	[more]
A0A2V3J514_9FLOR	6.800e-9	44.55	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..81
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_1708	contig	ScGOVlb_1708:1385460..1385993 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5948.t1	Gvermi5948.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_1708 1385460..1385993 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5948.t1 ID=Gvermi5948.t1|Name=Gvermi5948.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=178bp
LDDGVESVKNDLQNTSNQHALLSDKVGAQSVRHNTDSGSDGYLKSLKKKT
YRPVGRKQAKNEQYREKYNETKLRLAAQSVETEKERNRLLNRNYEIMLNT
SAPVGCDTAESVEYIKIMRARALAEVRASCEKWRSENYQPTEFFNSEASH
TKEGVTAALRSDSLMSSGENDVAIGDE*