Gvermi5931.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5931.t1
Unique NameGvermi5931.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length196
Homology
BLAST of Gvermi5931.t1 vs. uniprot
Match: A0A2V3IFY2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFY2_9FLOR)

HSP 1 Score: 251 bits (641), Expect = 2.950e-80
Identity = 126/194 (64.95%), Postives = 155/194 (79.90%), Query Frame = 0
Query:    1 MDDFEASPLNLRPCFLEDYFNIAAKNRVYHLIEGILVRKKMADQEQDCNAAFWEMTFNNEKPQKDKRVALLNPSVEVSGTSTANNNNASSSSQKPSILRPDMAIGKIPTAEQRRKLPKSSQQIMFQKGHPPKLTLETTSCNPTQDLSSKPKMYLDGSVTRVNTLHCDERENGKHAYIKREKTIDGVVVTKTTSI 194
            M+DF+AS L+LRPC LEDYFNIAA++ VY LIEGILV K+MADQE D  AAFW MTFNNEKP+KDKRVA+LNPSVE+S  ST N+N  S   +KP++LRPDMAI K+P+ +QRR  PK SQ IMF KG+PP LTLE+TSCNPT+DL++KPKMYLD     V+TLH D+R NG++A  K +K  +G +VT+TT I
Sbjct:    1 MEDFDASSLHLRPCSLEDYFNIAAEDGVYDLIEGILVMKEMADQEHDRGAAFWAMTFNNEKPEKDKRVAMLNPSVEISSDSTGNSNKGS---KKPTVLRPDMAIIKLPSDKQRRAAPKESQDIMFPKGYPPDLTLESTSCNPTKDLNTKPKMYLDSGAGSVHTLHRDKRGNGRNACYKIQKKENGQIVTETTPI 191          
BLAST of Gvermi5931.t1 vs. uniprot
Match: A0A2V3J062_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J062_9FLOR)

HSP 1 Score: 240 bits (612), Expect = 3.220e-78
Identity = 119/175 (68.00%), Postives = 144/175 (82.29%), Query Frame = 0
Query:    1 MDDFEASPLNLRPCFLEDYFNIAAKNRVYHLIEGILVRKKMADQEQDCNAAFWEMTFNNEKPQKDKRVALLNPSVEVSGTSTANNNNASSSSQKPSILRPDMAIGKIPTAEQRRKLPKSSQQIMFQKGHPPKLTLETTSCNPTQDLSSKPKMYLDGSVTRVNTLHCDERENGKHA 175
            M+ FEAS L+LRPC LEDYFNIAA++ VY LIEGILV K+MADQE    AAFW MTFNNEKP+KDKRVA+LNPSVE+S  ST N+N  S   +KP++LRPDMAIGK+P+ +QRR +PK SQ IMF KG+PP LTLE+TSCNPT+DL++KPKMYLD  V RV+TLH D+R  G++A
Sbjct:    1 MEGFEASSLHLRPCSLEDYFNIAAEDGVYDLIEGILVMKEMADQEHGRGAAFWAMTFNNEKPEKDKRVAMLNPSVEISSDSTGNSNKGS---RKPTVLRPDMAIGKLPSDKQRRAVPKESQDIMFPKGYPPGLTLESTSCNPTKDLNTKPKMYLDSGVGRVHTLHRDKRGKGRNA 172          
BLAST of Gvermi5931.t1 vs. uniprot
Match: A0A2V3IGA6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGA6_9FLOR)

HSP 1 Score: 176 bits (445), Expect = 2.040e-53
Identity = 89/135 (65.93%), Postives = 105/135 (77.78%), Query Frame = 0
Query:    1 MDDFEASPLNLRPCFLEDYFNIAAKNRVYHLIEGILVRKKMADQEQDCNAAFWEMTFNNEKPQKDKRVALLNPSVEVSGTSTANNNNASSSSQKPSILRPDMAIGKIPTAEQRRKLPKSSQQIMFQKGHPPKLTL 135
            M+DFEAS L+ RPC LE+YFNIA +N VY LIEG+L+ K+M DQE D  AA W MTFNNEKP+KDKRVA+L PSVE+   ST N N  S   +KP+ LRPDMAIGK+PTA++RR L K SQ IMF KGHPP+LTL
Sbjct:    1 MEDFEASSLHFRPCSLENYFNIAGENGVYDLIEGVLMLKEMEDQEHDRGAALWAMTFNNEKPEKDKRVAMLTPSVEIPSESTGNCNKPS---EKPTNLRPDMAIGKLPTAKERRALLKESQDIMFPKGHPPELTL 132          
BLAST of Gvermi5931.t1 vs. uniprot
Match: A0A2V3IMS6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMS6_9FLOR)

HSP 1 Score: 173 bits (438), Expect = 1.890e-52
Identity = 87/128 (67.97%), Postives = 103/128 (80.47%), Query Frame = 0
Query:    1 MDDFEASPLNLRPCFLEDYFNIAAKNRVYHLIEGILVRKKMADQEQDCNAAFWEMTFNNEKPQKDKRVALLNPSVEVSGTSTANNNNASSSSQKPSILRPDMAIGKIPTAEQRRKLPKSSQQIMFQKG 128
            M+DF +S L+LRPC LEDYFNIAA++ VY LIEGILV K+MADQEQD  AAFW M FNNEKP+KDKRVA+LNPSVE+S  ST N+N  S   +KP +LRPDMAIGK+P  +QRR +P+ SQ IMF KG
Sbjct:    1 MEDFGSSSLHLRPCSLEDYFNIAAEDGVYDLIEGILVMKEMADQEQDRGAAFWAMKFNNEKPEKDKRVAMLNPSVEISSDSTGNSNKGS---RKPIVLRPDMAIGKLPNDKQRRTVPQESQDIMFPKG 125          
BLAST of Gvermi5931.t1 vs. uniprot
Match: A0A2V3IG31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG31_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 5.260e-40
Identity = 74/154 (48.05%), Postives = 101/154 (65.58%), Query Frame = 0
Query:   41 MADQEQDCNAAFWEMTFNNEKPQKDKRVALLNPSVEVSGTSTANNNNASSSSQKPSILRPDMAIGKIPTAEQRRKLPKSSQQIMFQKGHPPKLTLETTSCNPTQDLSSKPKMYLDGSVTRVNTLHCDERENGKHAYIKREKTIDGVVVTKTTSI 194
            M DQ+ D    FW MTFNN+KP +D+RVA+L PSVE+     +++N+ SSSS++P+  RPDMAIG +P  E+R KLPKSS+ +MF  G PP + LET S  P +DL  KP  Y    V  ++TLH D R NGK+A+ + ++  DG   T+T  I
Sbjct:    1 MGDQDHDRAETFWAMTFNNQKPPEDRRVAMLTPSVEIPLPEGSSSNDTSSSSRRPTATRPDMAIGTLPAPEERAKLPKSSRDVMFSAGRPPLMALETISSKPGKDLEKKPSSYRQAGVQTLHTLHRDRRGNGKNAFHRIQRLQDGQYETETRPI 154          
The following BLAST results are available for this feature:
BLAST of Gvermi5931.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IFY2_9FLOR2.950e-8064.95Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3J062_9FLOR3.220e-7868.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGA6_9FLOR2.040e-5365.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMS6_9FLOR1.890e-5267.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG31_9FLOR5.260e-4048.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1189552..1190139 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5931.t1Gvermi5931.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1189552..1190139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5931.t1 ID=Gvermi5931.t1|Name=Gvermi5931.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=196bp
MDDFEASPLNLRPCFLEDYFNIAAKNRVYHLIEGILVRKKMADQEQDCNA
AFWEMTFNNEKPQKDKRVALLNPSVEVSGTSTANNNNASSSSQKPSILRP
DMAIGKIPTAEQRRKLPKSSQQIMFQKGHPPKLTLETTSCNPTQDLSSKP
KMYLDGSVTRVNTLHCDERENGKHAYIKREKTIDGVVVTKTTSIY*
back to top