Gvermi5927.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5927.t1
Unique NameGvermi5927.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1034
Homology
BLAST of Gvermi5927.t1 vs. uniprot
Match: A0A2V3IQB0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQB0_9FLOR)

HSP 1 Score: 173 bits (439), Expect = 3.250e-41
Identity = 103/319 (32.29%), Postives = 166/319 (52.04%), Query Frame = 0
Query:   11 VLISSKTLDEIEKRSRKISLRPRDEVLINDLVKEFEKYGVDKTRLGMPIISMPKMSTGMCSFETISGVELQSLKVWNMHEENLARFKSFPIMRVKHVE--VIEVMNLVDGRHRITAARLHTENNEINSEDSYFATHYVVQIVYDVSENDSRFLSLKHSRKVLTNAPCITDMMNCLPEPGTQFSGLKELLKDKTLHKKLMLPDNESAKKILAVSFALFPSVKQIMSKHRSTGMFDPISLLRSRKGFFHFLIGLERFKIFQSRTSDRQRLFQDCSQRFKEQLQVCVVATAIAMYRFPNSWKPETTLNKTAFSFLEEVSKSL 327
            VL+++  L  I++ S+  SLR   E ++   V +F +YG+D  RLG+ +I+          F +I    L+ + VWN+ ++ L        + V  V+  ++  M   DGRH+  A +     N + + + +  T+  VQ V D +EN++R +SL+ SR VL   P ITD+MNC+P PG   + LK  +KD+   +KLMLPD+ES ++ L++SF L+PS K +M   R T +F    LLR   GF+  ++      +  SR S         S   KE+ Q+ ++A AI++  F  +      L + +  FLE V   L
Sbjct:   16 VLLTAAQLRFIKENSKARSLRMVSEEIVKKFVGDFNEYGLDPIRLGLLVIAFEAKLIHSGFFRSIYMAALKQINVWNIRKQVLHNLHEVQTISVDGVDPNMLRCMKFSDGRHQFAAVQKFILENGVLTPEEFDQTYVQVQFVPDCTENEARIISLQRSRTVLVTTPGITDVMNCMPHPGVGLAKLKSYIKDEATARKLMLPDSESVRRALSLSFGLYPSSKALMKLFRCTNLFSTSILLRKNHGFYQLVVSTTPLPLVLSRYSAVLSKLHKASLTLKERCQLVLIAFAISICMFGINANENELLGRFSKCFLEAVPSGL 334          
BLAST of Gvermi5927.t1 vs. uniprot
Match: A0A2V3IF70_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF70_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 1.950e-13
Identity = 58/186 (31.18%), Postives = 92/186 (49.46%), Query Frame = 0
Query:  841 RRMFRCAIGNQNEDIKVIWYILPRLLGAENHTSVSSKLRFEKITIRDEHLKTPHPSPQFAELVCKLLKSRKPESDGFFEGLCAVQFDGKIETEAIKVAQNLLGHVSTYFEAEKVI-KVIAFLGYERKSQETHFISGVMFKDGESRDRIYVYDGMKDEGKPKGMTLFTAFKKKNSVFSIPALYAFVV 1025
            R  F CA        +V+  +LPRLLG     + +S++ F  + +    L     S   AE++ K L S+  + D     + A    G  ET   +  + LLG  S+++E   +   V+A++GY   S++THFI+G +F   +  + IY+YDG+K  GKP   +L  AF+ +   F I  L A  V
Sbjct:  627 RMWFPCADNEFINLHEVLAMLLPRLLGFREVITAASQVSFLVVQLTSGILSEIDTSASLAEVIHKKLCSK--DLDDKIGCVVATVSFGLGETVVAEARERLLG--SSHYECRGITTSVLAYIGYSTSSKKTHFIAGKLFNSKDGSEHIYIYDGLKQNGKPLASSLQNAFRFRKGKFDIDGLVAIAV 808          
The following BLAST results are available for this feature:
BLAST of Gvermi5927.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IQB0_9FLOR3.250e-4132.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IF70_9FLOR1.950e-1331.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1161015..1165317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5927.t1Gvermi5927.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1161015..1165317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5927.t1 ID=Gvermi5927.t1|Name=Gvermi5927.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1034bp
MENETQLPHTVLISSKTLDEIEKRSRKISLRPRDEVLINDLVKEFEKYGV
DKTRLGMPIISMPKMSTGMCSFETISGVELQSLKVWNMHEENLARFKSFP
IMRVKHVEVIEVMNLVDGRHRITAARLHTENNEINSEDSYFATHYVVQIV
YDVSENDSRFLSLKHSRKVLTNAPCITDMMNCLPEPGTQFSGLKELLKDK
TLHKKLMLPDNESAKKILAVSFALFPSVKQIMSKHRSTGMFDPISLLRSR
KGFFHFLIGLERFKIFQSRTSDRQRLFQDCSQRFKEQLQVCVVATAIAMY
RFPNSWKPETTLNKTAFSFLEEVSKSLWAQIGIEKSAESLVWKVFTEVIK
TKVMTMQKSVDGEKLLQEALFSVAELPGFCKALGTQRSRNHIKECAKEFY
GSEKAEVLQTYVTNKIFCTEAKAFMSKLKPKIRELDEDHLYNVLEEGSFF
YNTGCDPKLASTILRVLVGAVKVAVFNESCDKPTLERIARLSKNRLQVWK
HASLRNLLSNEMKSLKSFIIEKYEERHTFSMEELKIPLLFTSLEKTVQKM
EINADMFLEKLISGHNIVREEVGCEMEANDLQSIKSKAKKELNLHFLSDD
ENGDVEDFKESLRVLFTSPGKSDDENIAIVDQNDFWEVGKRATSALEECA
KDGTQFSIIIFVVGGLNSSLGEEFVVGNIVYERSHVFIKSKKNWDIFKDR
KVPLESIAVVYRKSGGISSTRMQHGSVSSPNYGIWCHDDDARFLRDVFLT
VVKKRCNLFDFTCGELFVMGALCEDDAITNSIAKFYRAMPYSFGTDYKRC
FEYLRQVCLADCDCEGHCVLQGMEHKANEIETAEDVPDAVRRMFRCAIGN
QNEDIKVIWYILPRLLGAENHTSVSSKLRFEKITIRDEHLKTPHPSPQFA
ELVCKLLKSRKPESDGFFEGLCAVQFDGKIETEAIKVAQNLLGHVSTYFE
AEKVIKVIAFLGYERKSQETHFISGVMFKDGESRDRIYVYDGMKDEGKPK
GMTLFTAFKKKNSVFSIPALYAFVVCSKAEIID*
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