Gvermi5906.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5906.t1
Unique NameGvermi5906.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length380
Homology
BLAST of Gvermi5906.t1 vs. uniprot
Match: A0A2V3IPJ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPJ7_9FLOR)

HSP 1 Score: 461 bits (1185), Expect = 3.220e-158
Identity = 230/375 (61.33%), Postives = 271/375 (72.27%), Query Frame = 0
Query:    2 LRAPVRYAFYVASYGQFNNQLVSLINALYFARSLRAALVLPYTTLGKESAADARLGHRSVNRVMNHQLVGDYFNYSRLLRLYPVIQPHIFFASPPAQRLLARPNVTVSHRAGNYYRALFRTAVNSRAPPLRVISHRPPAPLPHPRYCLHDARHEFRRHNGLGYDPHFALLPIIFFRHNLNCTATHPDWVSIRRFLVPNDVFLRPVHRFLHSVPRPLLSIHLRLFLNGDVPNTSAEAIVHSLFRRFAPQLREVRTLFVAYSPSSPMSQHVFRLLAHRFHGHVVDGSTFKQFVHPHEKHVTQLPLAPVLFDMWVCVRSRYFVGRLGSSLSWNVAMWRKALWHQYGLEQSIVESPLWYALEHFSTTGVTRNEGHIYGT 376
            LR P RY  YV+ YGQ NNQ+VSLIN ++FA+SL A LVLP+T+LGKES+ DA L +++ +R   HQLV  YFNYSRLL  +PV+ P  FF S P + LL+ PNVTVS+RAGNYY++LFRT  N+    + VI+H     L HP YC HDA  E  RH   G+ P F L+PI+FFRHNLNCTA HPDW+S+RR L+P D FL  V RFL ++  P+L+IHLRLFLNGD+ NT A AIV + F RF  QL    TLF+AYSPSS MS  VFRLL  RF GHVVDG+T+  F  PH  HV QLPLA VLFDMWVCVRS  F GRLGSSLSWNV MWR AL  QYGLE  +V SPLWY LE+ +TTGV R EG +YGT
Sbjct:   68 LRDPTRYLLYVSEYGQLNNQIVSLINGIFFAKSLDAVLVLPFTSLGKESSRDALLANKTASRRTPHQLVFHYFNYSRLLSAHPVVSPVEFFRSEPGKTLLSFPNVTVSYRAGNYYKSLFRTVTNTSHLSISVITHPSRRALSHPDYCNHDAVKELSRHYYQGFHPRFILMPIVFFRHNLNCTAVHPDWISMRRNLLPIDSFLEAVQRFLDTLDPPVLAIHLRLFLNGDLDNTDAYAIVQAFFIRFEEQLNHANTLFLAYSPSSEMSVKVFRLLRKRFSGHVVDGTTYASFFDPHHAHVAQLPLASVLFDMWVCVRSHLFAGRLGSSLSWNVVMWRMALRDQYGLESRVVNSPLWYTLENIATTGVKRKEGLLYGT 442          
BLAST of Gvermi5906.t1 vs. uniprot
Match: A0A2V3IR55_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR55_9FLOR)

HSP 1 Score: 145 bits (365), Expect = 1.900e-35
Identity = 127/393 (32.32%), Postives = 177/393 (45.04%), Query Frame = 0
Query:    8 YAFYVASYGQFNNQLVSLINALYFARSLRAALVLPYTTLGKESAADARLGH-------------------RSVNRVMNH-QLVGDYFNYSRLLRLYPVIQPHIFFASPPAQRLLARPNVTVSHRAGNYY------RALFRTAVNSRAPP----LRVISHRPPAPLPHPRYCLHDARHEFRR-HNGLGYDPHFALLPIIFFRHNLNCTATHPDWVSIRRFLVPNDVFLRPVHRFLHSVPRPLLSIHLRLFLNGDVPNTSAEAIVHSLFRRFAPQLREVRTLFVAYSPSSPMSQHVF----RLLAHRFHGHVVDGSTFKQFVHPHEKHVTQLPLAPVLFDMWVCVRSRYFVGRLGSSLSWNVAMWRKALWHQYGLEQSIVESPLWYALEHFSTTG 365
            Y FY A  GQ NNQL+S  NAL  A+   A LV P+   G ES  D                        +++     H +LVGDY + S L +  PV+    F  SP A  L   P+V        +Y      R LF+  VN R  P    L    ++P +       C  +    FR      G + +F  L  ++  H+LNCT ++P W+ +RR++ P       V + L    + +L+IH+RLF   D    +       + +RF  Q+R+  TL++AYS SS  S  +     R LA +      D  + +Q      K  T     P L DMWVCV S +FVGRLGSSLSWNVA WR A     G+ ++  E   +Y L+ FS  G
Sbjct:   94 YLFYKARSGQLNNQLISFFNALTIAKEADAVLVAPFAFYGSESYVDFAQSKGFLYKLYEACDLYIYQPFLKAIGLFYKHDELVGDYIDGSLLNKTQPVVSIMHFLKSPGADYLRTFPHVLARKGDAPFYYMSLGKRTLFQENVNMRGEPAQNDLTSAFYKPASR--RDLDCNFNVSDHFRGLQYSAGVNGNFLFLSRLYRSHSLNCTESNPYWLELRRYVQPRVEIRELVEQHLVQWEK-VLAIHVRLF-PSDFGKFAVRRYCQYMLKRFDKQIRDSDTLYIAYSSSSEDSAAIVSELRRTLADKRIATAADFGSLRQRGPVFNKRYT----IPFL-DMWVCVWSNFFVGRLGSSLSWNVAYWRAAF--SPGVSETKHE---FYQLKDFSDNG 472          
The following BLAST results are available for this feature:
BLAST of Gvermi5906.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IPJ7_9FLOR3.220e-15861.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IR55_9FLOR1.900e-3532.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019378GDP-fucose protein O-fucosyltransferasePFAMPF10250O-FucTcoord: 11..336
e-value: 8.6E-10
score: 38.8
NoneNo IPR availableGENE3D3.40.50.11350coord: 196..343
e-value: 6.1E-8
score: 34.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:724745..725884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5906.t1Gvermi5906.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 724745..725884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5906.t1 ID=Gvermi5906.t1|Name=Gvermi5906.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=380bp
LLRAPVRYAFYVASYGQFNNQLVSLINALYFARSLRAALVLPYTTLGKES
AADARLGHRSVNRVMNHQLVGDYFNYSRLLRLYPVIQPHIFFASPPAQRL
LARPNVTVSHRAGNYYRALFRTAVNSRAPPLRVISHRPPAPLPHPRYCLH
DARHEFRRHNGLGYDPHFALLPIIFFRHNLNCTATHPDWVSIRRFLVPND
VFLRPVHRFLHSVPRPLLSIHLRLFLNGDVPNTSAEAIVHSLFRRFAPQL
REVRTLFVAYSPSSPMSQHVFRLLAHRFHGHVVDGSTFKQFVHPHEKHVT
QLPLAPVLFDMWVCVRSRYFVGRLGSSLSWNVAMWRKALWHQYGLEQSIV
ESPLWYALEHFSTTGVTRNEGHIYGTTSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019378GDP-Fuc_O-FucTrfase