Gvermi5885.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5885.t1
Unique NameGvermi5885.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length248
Homology
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BLAST of Gvermi5885.t1 vs. uniprot
Match: A0A2V3IIQ4_9FLOR (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ4_9FLOR)

HSP 1 Score: 158 bits (399), Expect = 5.700e-41
Identity = 80/96 (83.33%), Postives = 88/96 (91.67%), Query Frame = 0 
Query:  151 ICLFSYDGGGGVMSTRSQIVVLGNSLCKAVREKLEIGGQERFMFVLRTSSKEYFFAAETDEIRRNWIRELKEAARKDAGRLPHATTKGRSMALRKR 246
            +CLFSYD GGGV+STRSQIVVL NSLCKA++EKLEIGGQERFMFVLRT SKEYFFAAETDEIRRNWI+ELK+AARKD GRL H+  KGRSMA R+R
Sbjct:  557 MCLFSYDSGGGVISTRSQIVVLHNSLCKALKEKLEIGGQERFMFVLRTQSKEYFFAAETDEIRRNWIKELKDAARKDTGRLLHSN-KGRSMAFRRR 651
The following BLAST results are available for this feature:
BLAST of Gvermi5885.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IIQ4_9FLOR5.700e-4183.33PH domain-containing protein n=1 Tax=Gracilariopsi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 152..230
e-value: 1.0E-7
score: 33.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..247
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 175..232
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 191..225
score: 8.1713

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:536100..538277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5885.t1Gvermi5885.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 536100..538277 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5885.t1 ID=Gvermi5885.t1|Name=Gvermi5885.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=248bp
MHTLPPHDPAFPKQWADEMALASSTLSTPPPSLLPPPKSPAHPQSQSQSL
AAPAFDSQLDAFLHRFQHHILAARDLKHRLDHFQSHDDPAYHAYKHSFKM
KMHHIRSLFATEGEHFVNTLERRNPHLTVPECGHNTLELANGIERLESAA
ICLFSYDGGGGVMSTRSQIVVLGNSLCKAVREKLEIGGQERFMFVLRTSS
KEYFFAAETDEIRRNWIRELKEAARKDAGRLPHATTKGRSMALRKRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR001849PH_domain