Gvermi5880.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
|
Overview
Homology
BLAST of Gvermi5880.t1 vs. uniprot
Match: A0A2V3IV53_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV53_9FLOR) HSP 1 Score: 440 bits (1131), Expect = 1.250e-148 Identity = 241/424 (56.84%), Postives = 302/424 (71.23%), Query Frame = 0
Query: 29 SIWDLIRGHGGDITNRFDTDPWDFDVFRALVELVPSVKTVLHTRTDITVFLPNDLACAQTANDLVALSANTTVAPTPVNTEQHAFFSLTSNWAQRYENPTKALELWLNYHIVSGAYSFQSVLELGSFNFNTLAQQPLNLVVTRLQHNDPRLANAEIAFAPPSQPTTQPFNGFVVVVDRMLFPSFSSLPLKPDAAQPLPSASSSISTAPAXXXXXXXXXXXXLAKXXXPSPSAXXXXXXXXTAACFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEHASSNVYLFSHRELHGVHSFIQVTSEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVHGPSRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLRYAVNSRLSLEPFGSLLYSGAP-RVSSWLPSGLPFSW 451
++WD +R HG D FD++ WDFDVFR+ V+LVPSV++ L TR+ T+ LPND AC QTAND++AL+ T PVNTEQHAF SL W RY N T+ALELWLNYHI++ ++F+ +LELG+F F TLA Q L + +T+L HND RL +AE AFAP SQP QP NG+VVVVDRMLFPSF+ L LKP++ LPS S S++ XXXXXX XXX XXXXXX ACFP SSTV+L+ G + LS+L+AG V VS+ ++S VYLFSHR +G+++F+Q+T+E NHTIELT GHYIYA+GR VAA V GD LRT+ GPSRVR +R+VR GL+APHT HGDIV+N ++ASTYTTA +P AH+ L P+R+ +SLEP GS LYSG P V+ WLPSG P W
Sbjct: 37 TVWDFVRAHGSDSDTHFDSNYWDFDVFRSFVDLVPSVRSTLQTRSQFTLILPNDGACIQTANDVIALTNETATTNNPVNTEQHAFISLQRTWLDRYANTTEALELWLNYHILTTPHTFEGILELGAFKFKTLAGQDLAVHITKLSHNDNRLPHAEFAFAPQSQPAIQPSNGYVVVVDRMLFPSFAQLTLKPNSTDLLPSPPPSPSSSRDPIRRITXXXXXXXXXXXXXXXXXXXXXXXSSQPACFPGSSTVHLQGGRSQLLSSLKAGQVVWVSDESTSEVYLFSHRSQYGLYTFLQITTELNHTIELTHGHYIYADGRRVAAHVVRTGDMLRTLDGPSRVRTIRSVRRQGLIAPHTFHGDIVVNRIIASTYTTAFSPWFAHTVLLPIRFLARIGVSLEPLGSTLYSGGPIAVTQWLPSG-PSIW 459
BLAST of Gvermi5880.t1 vs. uniprot
Match: A0A2V3ISE7_9FLOR (Tiggy-winkle hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISE7_9FLOR) HSP 1 Score: 157 bits (398), Expect = 3.080e-38 Identity = 79/167 (47.31%), Postives = 110/167 (65.87%), Query Frame = 0
Query: 272 CFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEHASSNVYLFSHRELHGVHSFIQVTSEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVHGPSRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLRYAVNSRLSLEPFGSLLYSGAPR 438
CFPSS+ ++L G + ++ L AGH+++ SE SS VYLFSHR+ G + F+++ SEHNH+IEL+ HYIYAN + A V GD LRT+ GPS V+ + V+ GL APHTL GDI + V+AS+YT+A+ +AH L +R V L EP G++LY G P+
Sbjct: 558 CFPSSAVIHLSSGQDIRMANLEAGHRIMSSESKSSTVYLFSHRQPLGTYPFVRIVSEHNHSIELSAEHYIYANRQLKPAIDVKRGDILRTLDGPSTVKTISTVQREGLFAPHTLQGDIAVGRVIASSYTSALPHWVAHPILEIVRLPVRLGLMKEPLGAVLYDGCPK 724
BLAST of Gvermi5880.t1 vs. uniprot
Match: R7Q842_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q842_CHOCR) HSP 1 Score: 147 bits (371), Expect = 1.940e-34 Identity = 138/402 (34.33%), Postives = 192/402 (47.76%), Query Frame = 0
Query: 47 TDPWDFDVFRALVELVPSVKTVL-HTRTDITVFLPNDLACAQTANDLVALSANTTVAPTPVNTEQHAFFSLTSNWAQRYENPTKALELWLNYHIVSGAYSFQSVLELGSFNFNTLAQQPLNLVVTRLQHNDPRLANAEIAFAPPSQPTTQPFNGFVVVVDRMLFPSFSSLPLKPDAAQPLPSASSSISTAPAXXXXXXXXXXXXLAKXXXPSPSAXXXXXXXXTAACFPSSSTVYLRRGVAVPLSTLRAGHQVLVS-EHASSNVYLFSHRELHGVHSFIQVTSEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVHGPSRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLRYAVNSRLSLEPFGSLLYSGAPRVSSWLPSG 446
+DP F + V V S+ VL + + +TVF P D A AN L A AN + E A + + A +E L YH + A Q + + S TL +++ ++ D +A I S P NG+V VVD +L P + +AS SIS XXXXXXXXXXXX + CFP S+T+ L G +VP+ L AG ++ V E +S ++ F+H+ F +T+ H++ LT HY+YANG+ AA V GD L T G S+V R+ V GL APHTLHGD+ ++GVV S Y+ A+ P +AH LAP+R +EP GSL Y GA R++S+LP G
Sbjct: 649 SDPEQFGILGRAVGTVDSLVEVLGNPGSRLTVFAPTDEAFTNLANTL-APDANLEASDKDAVVE--ALVTAIAPLADVEAAGGATIESILLYHTLGEASPIQELEK--SDTLTTLQGDSISVADGKVTDGDDSRDDAAI-----STPNIFLQNGWVHVVDSVLLPF--------NLGNLASAASPSISPEAEXXXXXXXXXXXXXDEDDDDD------------GVCFPESATIRLADGSSVPMHLLEAGTEIHVGREGKTSRIFAFTHKNRVRRTLFYALTTASGHSVTLTGSHYLYANGKLTAAGAVQIGDMLDTRAGNSQVVRVGRVHGKGLFAPHTLHGDLEVDGVVVSGYSRALNPTIAHGLLAPVRLLTKYAGVVEPLGSLFYDGADRIASYLPKG 1020
BLAST of Gvermi5880.t1 vs. uniprot
Match: A0A2V3IE18_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE18_9FLOR) HSP 1 Score: 140 bits (352), Expect = 4.980e-33 Identity = 74/177 (41.81%), Postives = 109/177 (61.58%), Query Frame = 0
Query: 272 CFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEH-ASSNVYLFSHRELHGVHSFIQVTSEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVHGPSRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLRYAVNSRLSLEPFGSLLYSGAPRVSSWLPSGL 447
CFP+S+TV G V ++ L AG + EH ASS V+LF+HR L F ++++ H + +T HY+Y N R VAA V G+ +RT+ GPS V ++ V+ GL APH+LHGD+V++G+V S+Y+ AVAP LAH+ L PLR+ V + + E + Y G + ++P GL
Sbjct: 297 CFPASATVTTADGSTVRMADLEAGQHIQHDEHGASSPVFLFTHRTLKREQWFYRISTASGHAVSITGNHYLYVNERLVAAHAVQVGNVVRTMSGPSAVVKVERVKDVGLYAPHSLHGDVVVDGIVCSSYSRAVAPGLAHALLLPLRWFVRASGAREVLPGVFYEGGRGLERFVPKGL 473
BLAST of Gvermi5880.t1 vs. uniprot
Match: R7QFW8_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW8_CHOCR) HSP 1 Score: 137 bits (345), Expect = 3.640e-32 Identity = 85/185 (45.95%), Postives = 112/185 (60.54%), Query Frame = 0
Query: 269 TAACFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEHASSNVYLFSHRELHGVHSFIQVT-SEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTV-HGPSRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLR-YAVNSRLSLEPFGSLLYSGAPRVSSWLPSGLPFS 450
TA+CFP++STV L G +P+S LR GH V VS HA S V+LFSHR S+IQ+T + NHT+ +T GHY++ N + + AA GD + T HG + V +R V+A GL PHTL GD+V++G V STYTTAV +A LAPLR + + +S FGS L G SG+P S
Sbjct: 279 TASCFPATSTVELASGARIPMSDLRIGHSVRVSTHAFSPVFLFSHRTSSSAPSYIQITPTTGNHTLTVTSGHYLHINRQLLPAAAAKVGDHILTADHGWAPVAAVRIVQANGLYNPHTLQGDLVVDGFVTSTYTTAVPRRIATGLLAPLRAFYRHGLVSERLFGSFLADG-------FRSGIPAS 456
BLAST of Gvermi5880.t1 vs. uniprot
Match: A0A2V3IX71_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR) HSP 1 Score: 133 bits (335), Expect = 1.240e-30 Identity = 79/180 (43.89%), Postives = 111/180 (61.67%), Query Frame = 0
Query: 270 AACFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEHASSNVYLFSHRELHGVHSFIQVTSEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVHGP-SRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLRYAVNSRL--SLEPFGSLLYSGAPRVSSWLPSG 446
A CFP+ +TV L G A + ++ G +V+V S V++F+H+ + F+ + + +T+ LTPGHY+Y NG AA+TV GD L + V ++ V +TGL P TLHGDIV+NG+ ASTYTTAV P LAH+ L+PLR A SRL SL F + GA R++S++PSG
Sbjct: 308 AVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLR-AAYSRLGFSLRAFEA----GADRIASYMPSG 482
BLAST of Gvermi5880.t1 vs. uniprot
Match: A0A1X6NWZ3_PORUM (Hint domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWZ3_PORUM) HSP 1 Score: 127 bits (318), Expect = 9.050e-29 Identity = 78/185 (42.16%), Postives = 104/185 (56.22%), Query Frame = 0
Query: 269 TAACFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEHASSNVYLFSHRELHGVHSFIQVT--------SEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVH---GPSRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLRYAVNSRLSLEPFGSLLYSGAPRVSSW 442
+A+CFP+++TV L G L L AG V V A S+V+ SHR+ G H+++++T + + L+PGH +YANG V A V GD L T G S V + A G V PHTLHGD+V++GV STYT A+ P +AH+ LAP R A + LS EP G LLY+G P W
Sbjct: 221 SASCFPAAATVELADGSTAALGALPAGSTVRVGAGAHSDVFGCSHRQTGGRHAYVRLTHGDGAAAAASTTRDLLLSPGHLVYANGVLVPARDVVVGDALATPGTGTGVSVVXAVGTAVAVGKVNPHTLHGDVVVDGVRVSTYTDALHPSVAHALLAPARAAYRAGLSAEPLGRLLYNGVPGWGRW 405
BLAST of Gvermi5880.t1 vs. uniprot
Match: R7QPN9_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPN9_CHOCR) HSP 1 Score: 123 bits (309), Expect = 6.190e-27 Identity = 75/178 (42.13%), Postives = 104/178 (58.43%), Query Frame = 0
Query: 271 ACFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEHASSNVYLFSHRELHGVHSFIQVTSEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVHGPSRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLR--YAVNSRLSLEPFGSLLYSGAPRVSSWLPSG 446
ACFP+ +TV L+ G V + LRAGH V VS S+VY FSHR+ H F+++ +E H++ L+ GHY+ VAAA V G + P RV + +TG+ APHT+ GD+V++GV+ STYTTAV P+LAH LAP+R Y + ++ +L G V S LP G
Sbjct: 343 ACFPADATVQLKDGSHVAMRDLRAGHVVRVSG-GHSHVYFFSHRQEEERHMFVRIRTEGGHSVRLSMGHYVKVGRTLVAAAAVQVGHVVEASGQPVRVVEVGIEASTGMFAPHTMTGDVVVDGVLVSTYTTAVHPLLAHVLLAPVRGLYRIGK---VQWVDGVLDRGGGWVRSVLPRG 516
BLAST of Gvermi5880.t1 vs. uniprot
Match: A0A1X6NXN0_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXN0_PORUM) HSP 1 Score: 124 bits (311), Expect = 6.880e-27 Identity = 78/180 (43.33%), Postives = 104/180 (57.78%), Query Frame = 0
Query: 270 AACFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEHASSNVYLFSHRELHGVHSFIQVTSEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVHGPSR---VRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLRYAVNSRLSLEPFGSLLYSGAPRVSSWLPSG 446
+ CFP+ +TV L G VP++ + G V VS A S V+LF+HR G F+++T+ ++ T GHY+YANGR AA V GD L TV + V V TGL P TLHGDIV+NG+ ASTYT A+ P +A + LAPLR A+ L + L GA R+++ LPSG
Sbjct: 478 SVCFPADATVELADGRTVPMADVALGDHVRVSATAYSPVFLFTHRVRGGRRPFVRLTTAAGASLTATAGHYVYANGRLTAAGAVRVGDRLETVGDAATCTVVTATARVAGTGLYNPQTLHGDIVVNGIRASTYTMAIEPAVASTLLAPLR-ALFRLAGLTT--TALDGGADRLAALLPSG 654
BLAST of Gvermi5880.t1 vs. uniprot
Match: A0A2V3J5K7_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K7_9FLOR) HSP 1 Score: 119 bits (297), Expect = 1.920e-25 Identity = 67/168 (39.88%), Postives = 97/168 (57.74%), Query Frame = 0
Query: 272 CFPSSSTVYLRRGVAVPLSTLRAGHQVLVSEHASSNVYLFSHRELHGVHSFIQVTSEHNHTIELTPGHYIYANGRSVAAATVNEGDWLRTVHGPSRVRRLRNVRATGLVAPHTLHGDIVINGVVASTYTTAVAPILAHSALAPLRYAVNSRLSLEPFGSLLYSGAPRV 439
CFP S++V L G + + L G +VLV + S ++ FSHR+ H F + + H I T GH+IYAN ++ V G LRT+ G V ++ GL P T+ GDI++NGVVASTYT +V P +AH+ALAPLR A+++ ++ G LL SG ++
Sbjct: 324 CFPESASVTLLDGSSARMWQLEVGDEVLVGPNTYSRIFAFSHRDAHVKKLFYTLYTSSGHAISATQGHFIYANNAAIPIERVQVGQSLRTITGSGVVVKVDRQWMKGLYNPQTVQGDIIVNGVVASTYTKSVVPAVAHAALAPLR-AISTVCRVDMLGWLLESGVRQL 490 The following BLAST results are available for this feature:
BLAST of Gvermi5880.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5880.t1 ID=Gvermi5880.t1|Name=Gvermi5880.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=453bpback to top |