Gvermi5875.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5875.t1 vs. uniprot
Match: A0A2V3IRQ1_9FLOR (AP complex subunit sigma n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRQ1_9FLOR) HSP 1 Score: 273 bits (698), Expect = 7.850e-92 Identity = 137/169 (81.07%), Postives = 152/169 (89.94%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAEPAPEFAPKTPAASMHHAAISNAPRRR 169
MIHWI+LINRQGKVRLSKWY+SFTETER+ ILRDVQ+ VLTRSSKMCNVVDRK +K+VYKRYASLYFIACIDAD+NEL MMELLHVFVEVLD YFGNVCELDLIFHFTRA+WILDEMFS GELLE DK+A+L AVY KDA AEP PEFAPKTP+ + H A+ S++ R R
Sbjct: 1 MIHWILLINRQGKVRLSKWYESFTETERSAILRDVQSHVLTRSSKMCNVVDRKDNKIVYKRYASLYFIACIDADENELAMMELLHVFVEVLDSYFGNVCELDLIFHFTRAYWILDEMFSGGELLECDKSAVLAAVYSKDAAAEPVPEFAPKTPSGA-HVASASHSSRHR 168
BLAST of Gvermi5875.t1 vs. uniprot
Match: A0A7S2ZN60_9RHOD (AP complex subunit sigma n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZN60_9RHOD) HSP 1 Score: 188 bits (478), Expect = 1.630e-58 Identity = 88/152 (57.89%), Postives = 119/152 (78.29%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAEPAPEFAPKT 152
M+H+ +L+NRQG VRL+KW+ F++ +R ILR++ N V+TR +KMCN V+ K K+VYKRYASLY + ID DDNEL+ +++LH++VE LD+YFGNVCELD+IF+F RA++ILDE+ GEL +S+K A L A Y DALAE PEFAPK+
Sbjct: 1 MMHYFLLVNRQGVVRLAKWFQPFSQKDRNKILREITNFVITRQNKMCNFVEWKDVKLVYKRYASLYAVVAIDPDDNELITLDMLHLYVETLDRYFGNVCELDIIFNFHRAYYILDEILLGGELQDSNKRAALHAAYEGDALAEKVPEFAPKS 152
BLAST of Gvermi5875.t1 vs. uniprot
Match: A0A5J4Z8F6_PORPP (AP complex subunit sigma n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8F6_PORPP) HSP 1 Score: 182 bits (462), Expect = 5.690e-56 Identity = 83/144 (57.64%), Postives = 118/144 (81.94%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAEP 144
MIH+I+LINRQGK+RLSKWY+ +++ +RA +RD+ +TVL R+SKMCNVV+ +HK+VYKRYASL+F+A + DDNEL+ +E+LH++VE LD+YFG+VCELDLIF+ AH++LDE+ AG+LLE ++ + +AV D LA+P
Sbjct: 1 MIHFIILINRQGKLRLSKWYEPYSQKQRAQFVRDISHTVLPRTSKMCNVVELDEHKLVYKRYASLFFVASVSRDDNELLAIEMLHMYVEALDQYFGSVCELDLIFNMDIAHYVLDEVIVAGQLLEPNRRLVKEAVRAADILADP 144
BLAST of Gvermi5875.t1 vs. uniprot
Match: L8HM08_ACACA (AP complex subunit sigma n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HM08_ACACA) HSP 1 Score: 181 bits (459), Expect = 1.110e-55 Identity = 80/143 (55.94%), Postives = 115/143 (80.42%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAE 143
MIH+++L+NRQGK RL+KW+ ++T +RA R+V VL R+++ CN+++ K+HK++YKRYASLYF+AC+D +DNELV +E +H FVE+LDKYFGNVCELDLIF+F +A+++LDE+ + GEL ES K A+L V ++D L E
Sbjct: 1 MIHFVLLLNRQGKTRLAKWFSTYTAKQRARFSREVSTLVLNRNARYCNIIEWKEHKLIYKRYASLYFVACVDWNDNELVTLETIHHFVEILDKYFGNVCELDLIFNFHKAYFVLDELIATGELQESSKNAVLRCVAQQDVLQE 143
BLAST of Gvermi5875.t1 vs. uniprot
Match: A0A059LQB8_9CHLO (AP complex subunit sigma n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LQB8_9CHLO) HSP 1 Score: 180 bits (456), Expect = 4.500e-55 Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 0
Query: 2 IHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAE 143
I WI+L++RQGKVRL+KWY + ++ +RA IL+DV VL+R+ KMCNV++ K HK+VYKRYASLYFI ID +DNEL+ +E++H FVEVLDKYFGNVCELDLIF+F +A+++LDE+ GEL E K A+L V +DAL E
Sbjct: 3 IRWIVLLSRQGKVRLAKWYTTISQKDRAKILKDVAPLVLSRAPKMCNVIEWKDHKVVYKRYASLYFICGIDNEDNELLTLEVIHQFVEVLDKYFGNVCELDLIFNFHKAYYVLDELILGGELQEPSKRAVLSRVEAQDALVE 144
BLAST of Gvermi5875.t1 vs. uniprot
Match: A0A1D2AGA2_AUXPR (AP complex subunit sigma n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AGA2_AUXPR) HSP 1 Score: 178 bits (452), Expect = 1.710e-54 Identity = 83/143 (58.04%), Postives = 113/143 (79.02%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAE 143
MI W++L++RQGKVRL+KWY + T+ ERA +L++V VL+R++K+CN +D K K+VYKRYASLYF+ +DAD+NEL+ +E++H FVEVLDKYFGNVCELDLIF+F +A++ILDE+ AGEL E K +L V +D L E
Sbjct: 1 MIRWVLLLSRQGKVRLAKWYTTTTQKERAKLLKEVSPLVLSRAAKLCNFIDWKDQKIVYKRYASLYFVMGVDADENELITLEIIHEFVEVLDKYFGNVCELDLIFNFHKAYFILDELLLAGELQEPSKRVVLQKVEAQDQLVE 143
BLAST of Gvermi5875.t1 vs. uniprot
Match: A0A1U8BA35_NELNU (AP complex subunit sigma n=13 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1U8BA35_NELNU) HSP 1 Score: 177 bits (450), Expect = 3.440e-54 Identity = 82/149 (55.03%), Postives = 115/149 (77.18%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAEPAPEFA 149
MIH+++LI+RQGKVRL+KWY +++ ER ++R++ +LTR K+CN V+ + HK+VYKRYASLYF CID DDNEL ++E++H FVE+LD+YFG+VCELDLIF+F +A++ILDE+ AGEL ES K + + +D+L E A E A
Sbjct: 1 MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGHKVVYKRYASLYFCMCIDQDDNELEILEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQA 149
BLAST of Gvermi5875.t1 vs. uniprot
Match: D2UXP0_NAEGR (AP complex subunit sigma n=2 Tax=Naegleria TaxID=5761 RepID=D2UXP0_NAEGR) HSP 1 Score: 177 bits (448), Expect = 5.200e-54 Identity = 82/143 (57.34%), Postives = 115/143 (80.42%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAE 143
MIH+++LI+RQ KVRL+KWY ++++ ERA I+++V + V+ R SK+ N +D K+HK+V+KRYASLYF+ACID DDNEL+ ME++H FVEVLDKYFGNVCELDLI +F +A++ILDE+F GEL E+ + IL + +D + E
Sbjct: 1 MIHFVLLISRQSKVRLAKWYSTYSQNERARIVKEVAHMVVGRPSKLSNFLDFKEHKLVFKRYASLYFVACIDKDDNELIAMEMIHHFVEVLDKYFGNVCELDLILNFHKAYFILDEVFVNGELQETSRKTILKVITTQDQMME 143
BLAST of Gvermi5875.t1 vs. uniprot
Match: A0A7S2JKH6_9EUKA (AP complex subunit sigma n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JKH6_9EUKA) HSP 1 Score: 176 bits (447), Expect = 7.150e-54 Identity = 84/147 (57.14%), Postives = 112/147 (76.19%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAEPAPE 147
MI +++L+NRQGKVRLSKWY F + E+ I+R+V + VL R+ K+CN +D + K+VYKRYASLYFI C+DA DNEL+ +E++H FVEVLD+YFGNVCELDLIF+F +A +ILDE+ AGEL E+ K +L +DAL E + E
Sbjct: 1 MIQFLLLLNRQGKVRLSKWYVPFNQKEKQKIIREVSSAVLARTPKLCNFLDWRDSKVVYKRYASLYFITCVDASDNELITLEIIHHFVEVLDRYFGNVCELDLIFNFHKAFYILDELIIAGELQETSKKTVLRVCAAQDALVESSAE 147
BLAST of Gvermi5875.t1 vs. uniprot
Match: A0A804KI82_MUSAM (AP complex subunit sigma n=4 Tax=Zingiberales TaxID=4618 RepID=A0A804KI82_MUSAM) HSP 1 Score: 176 bits (447), Expect = 9.520e-54 Identity = 82/149 (55.03%), Postives = 117/149 (78.52%), Query Frame = 0
Query: 1 MIHWIMLINRQGKVRLSKWYDSFTETERATILRDVQNTVLTRSSKMCNVVDRKQHKMVYKRYASLYFIACIDADDNELVMMELLHVFVEVLDKYFGNVCELDLIFHFTRAHWILDEMFSAGELLESDKAAILDAVYRKDALAEPAPEFA 149
MIH+++LI+RQGKVRL+KWY + + ER+T++R++ +L+R K+CN V+ K +K+VY+RYASLYF CID DDNEL ++E++H FVE+LD+YFG+VCELDLIF+F +A++ILDE+ AGEL ES K A+ + +D+L E A E A
Sbjct: 1 MIHFVILISRQGKVRLTKWYSPYQQKERSTVIRELSGLILSRGPKLCNFVEWKGYKVVYRRYASLYFCMCIDPDDNELEILEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKAVARLIAAQDSLVETAKEEA 149 The following BLAST results are available for this feature:
BLAST of Gvermi5875.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5875.t1 ID=Gvermi5875.t1|Name=Gvermi5875.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=170bpback to top |