Gvermi5860.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5860.t1
Unique NameGvermi5860.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length515
Homology
BLAST of Gvermi5860.t1 vs. uniprot
Match: A0A2V3IRN7_9FLOR (FACT complex subunit SSRP1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRN7_9FLOR)

HSP 1 Score: 832 bits (2149), Expect = 2.140e-301
Identity = 413/466 (88.63%), Postives = 445/466 (95.49%), Query Frame = 0
Query:    1 MATDDGLFLSFNTISTAGQALASGTLRISRTGFAWRAKDTSRNLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHFGGKTLTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEGAEQLKRTGGRQQVRIMDGE 466
            M TDDG  LSF +ISTAGQA ASGTLR+S+ GFAWRAK+++R + V+A+DLL+VEWLRGGRGHQLKLSLRGGSTLRLEGFR+SD+++I EFVS+  G KTLTRVNQA RGWSWGELDVTSGAASNLIFRTGGG+NV+TKALQFEE FEIPLGKVANVQLPGNGKELALDFHVDDTAGKM+EELVEMRFYIPEE+DA+KVYEQVK RADTSAFAGESLCSF HMGVAVPRGRYDVDMYANYIKLRG+AVDFKILYSSI RLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKT VDLPISA+DL +KYK KLNETESGYTWRVFSKVLKNLSATPLHVPKTFKS+E+GSGVRTALGANEGFLFFLETCCFFVNKPPTY RYDDID+VEFRRMDLERRFDLFIALTTGTNQ+LLFTNIERS+FEPIFSFLHE+KKVPVEGAEQLKRTGGRQQVR++DG+
Sbjct:    1 MPTDDGAVLSFGSISTAGQAFASGTLRLSKAGFAWRAKESTRTITVSATDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRSSDFTTIGEFVSQQHG-KTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVKTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMEEELVEMRFYIPEEEDAKKVYEQVKTRADTSAFAGESLCSFLHMGVAVPRGRYDVDMYANYIKLRGRAVDFKILYSSITRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTSVDLPISAEDLAKKYKSKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSSEDGSGVRTALGANEGFLFFLETCCFFVNKPPTYIRYDDIDYVEFRRMDLERRFDLFIALTTGTNQTLLFTNIERSDFEPIFSFLHESKKVPVEGAEQLKRTGGRQQVRMVDGD 465          
BLAST of Gvermi5860.t1 vs. uniprot
Match: R7QG91_CHOCR (FACT complex subunit SSRP1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG91_CHOCR)

HSP 1 Score: 691 bits (1782), Expect = 6.840e-246
Identity = 333/433 (76.91%), Postives = 387/433 (89.38%), Query Frame = 0
Query:   32 GFAWRAKDTSRNLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHFGGKTLTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEGAEQLKRTGGRQQVRIMD 464
            GFAW+AK+++RN+ VAA DL ++ WLRGGR  QL +SL+ GST+R EG +++D+  +  F+ +HFG K L  V QAVRGWSWGELDV+ GAA+NLIFRTGGG + + KA +FE++FE+PLGKVANVQLPGN KELALDFHVDDTA KMDEELVEMRFYIP+E++A+  +E++KARADTSAFAGES+CSF HMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSI RLFLLPKPDN+IVSFVMSLDPPIRQGNTMYPHLVFQFD+EEKTR+DLP+SA +LQ KYKGKL+ETE GYTWRVFSK+LKNLS+TPLHVPKTFKS+   SGVRTALGANEGFLFFLE+CC FVNKPPTY RYDDIDFVEFRRMDLERRFDLF++LTTG++ + LFTNIERSEFE +F FL+E++KVPVE AEQLKRTGGRQ+V + D
Sbjct:    5 GFAWKAKESNRNVTVAALDLSKLRWLRGGRAMQLAISLKAGSTIRFEGLKSNDFQDLQSFMRQHFG-KELLIVKQAVRGWSWGELDVSKGAAANLIFRTGGGESAKNKAREFEDSFEMPLGKVANVQLPGNAKELALDFHVDDTAAKMDEELVEMRFYIPDEEEAKDSFERIKARADTSAFAGESMCSFLHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSITRLFLLPKPDNVIVSFVMSLDPPIRQGNTMYPHLVFQFDSEEKTRIDLPLSADELQAKYKGKLSETEEGYTWRVFSKILKNLSSTPLHVPKTFKSSTGASGVRTALGANEGFLFFLESCCVFVNKPPTYIRYDDIDFVEFRRMDLERRFDLFMSLTTGSSATYLFTNIERSEFEHVFQFLYESRKVPVENAEQLKRTGGRQRVTLAD 436          
BLAST of Gvermi5860.t1 vs. uniprot
Match: A0A1X6P6F0_PORUM (FACT complex subunit SSRP1 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6F0_PORUM)

HSP 1 Score: 479 bits (1234), Expect = 1.510e-161
Identity = 245/460 (53.26%), Postives = 326/460 (70.87%), Query Frame = 0
Query:   10 SFNTISTAGQALASGTLRISRTGFAWRAKDTSRNLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHFGGKTLTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGS-----------------NVRTKALQFEETFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEGAEQLK 452
            +F  I  AGQ+  SG L++   G +W+AKDT+R LA+A S++  + WLRG RG Q+++++RGG+++R +GF+ SD+S +A F     G  +L+R  QAVRGWSWGE+ +   A+ +L FRTG G+                 N      + E+ FE+ LG V+NVQ+P   +ELALDFHVDDTA + DE LVE+RF++ +E  A  +YE +K+RADTSAFAGES+C+F  M V VPRGRYDVD++ N++KL GK+VDFKILY+SI RLFLLPKPD   V+FV+SLDPPIRQGNTMYPHLVFQFD E+     L +S ++L  KY  KL   E G TWRVFSKV+++LS T LH+PK F ++     VRTALGANEGFLFFL+T  FFVNKPPTY R+DD++ ++FRR+DL+RRFD+ + +T     + LFTNI+RSEF+ I  FL + K VP+E  E L+
Sbjct:   32 TFGNIYLAGQSSGSGVLKLGANGLSWKAKDTTRTLALARSEVSSLSWLRGCRGWQVRVAIRGGASVRFDGFKDSDFSGLATFFPATLG-LSLSRAKQAVRGWSWGEVAINR-ASGSLEFRTGNGAEGNDGRVMSSQAAARDANAAAANARMEDAFEVALGSVSNVQMPSK-QELALDFHVDDTAARQDECLVEVRFHVSDETRAASLYESIKSRADTSAFAGESICTFLDMPVIVPRGRYDVDLFPNHVKLHGKSVDFKILYNSISRLFLLPKPDGQHVAFVVSLDPPIRQGNTMYPHLVFQFDLEDAIDARLQLSTEELTTKYHSKLAAVEKGETWRVFSKVVRHLSGTSLHMPKNFLTSRGHRAVRTALGANEGFLFFLDTSFFFVNKPPTYIRFDDVEEIDFRRLDLDRRFDMHVTVTGSGTGTFLFTNIDRSEFDAILRFL-DGKGVPIENVEALR 487          
BLAST of Gvermi5860.t1 vs. uniprot
Match: A0A5J4YMW4_PORPP (FACT complex subunit SSRP1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMW4_PORPP)

HSP 1 Score: 427 bits (1098), Expect = 9.940e-142
Identity = 234/471 (49.68%), Postives = 310/471 (65.82%), Query Frame = 0
Query:    9 LSFNTISTAGQALASGTLRISRTGFAWRAKDTSRNLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHF-------GGKTLTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEG--AEQLKRTGGRQQVRI---MDGED 467
            L F  +  AG  +  GTL+I+ +G AWR ++ +R L V  +DL ++ WLRGGR  QL+   RG  + R EGF+ SD++SI  FV +H         G+ LTR+ QA RGWSWG   V+ GA   L F             + EE FEI L  VA V L G   EL L+FH DDTAG MDE + E+R  I EE +AE + E ++ +ADTSAFAGE L SF+ + + VPRG+Y+V+++ NY KL G++VD+KILYSS+ +LFLLPKPD I VSFV+SLDPPIRQGNTMYPHLVF F  +E+  V   ISA++L +KY+ KL  TE G  WRVFSK +++LS  PLH+P++F S      VRTALGANEG++FFLE+C FF+NKPPT  R+DD++ V+F+RMD  R FDL + LT+   Q  LF+NI+R+EF+ I  FL ++ KVP+    A   K + GR    +   +DG D
Sbjct:    5 LQFAGVLLAGLGVGEGTLKIASSGLAWRGREGARVLTVNKADLQQLVWLRGGRAQQLRCVCRGQISHRFEGFKESDFASIEAFVQKHALIGAAPKDGQHLTRLKQASRGWSWGTASVSGGA---LYFHND----------KLEEVFEISLSSVAQVNLSG-ANELGLEFHTDDTAGAMDECMTELRLAIAEEAEAESLAEAIRDKADTSAFAGERLASFSEISLLVPRGKYEVELFPNYFKLHGRSVDYKILYSSVTKLFLLPKPDEIHVSFVVSLDPPIRQGNTMYPHLVFNFKADEEVSVQFNISAEELAQKYE-KLKPTEEGELWRVFSKSVRHLSGKPLHIPRSFTSVHEQRAVRTALGANEGYIFFLESCMFFLNKPPTLIRFDDVELVQFKRMDNSRSFDLSVTLTSA--QVFLFSNIDRAEFDNIHEFL-KSHKVPMASIAAHVKKLSSGRGSAAVDMEVDGGD 457          
BLAST of Gvermi5860.t1 vs. uniprot
Match: A0A7S1TCE2_9RHOD (FACT complex subunit SSRP1 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCE2_9RHOD)

HSP 1 Score: 407 bits (1047), Expect = 2.980e-134
Identity = 214/448 (47.77%), Postives = 299/448 (66.74%), Query Frame = 0
Query:   11 FNTISTAGQALASGTLRISRTGFAWRAKDTSRNLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHF------GGKTLTRV--NQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEGAEQ 450
            F  +  AGQ+  +GTL +  TG  W++++ +R + V   ++  +EW RG +G+ L+  LRGG++++ +G +  D+S++ +FV+E +      GG+ +  V   Q   GWSWG    T GA   +  + G             E FEIPLG V+ V +P    E+AL+FHVDDT G  DE LVEMR  IP+ ++A K+Y+ +KA+ADTSAFAGES+ SF  + V +PRGRYDVD+Y +++KL GK+ D+KILY+SI RLFLLPKPD + V FVMSLDPPIRQGNTMYPHL+F F  E      L +S  DL+ KY  K+++ E G  W+VFSKV + L+  PLHVPKTF S      VRTALGAN+G +F LE+  FFV KPPTY R+DDI+ +EF+RMD+E+RFD+  A+TT +  + LF+NI++ EF+ I  FL ++KK+P+ G  +
Sbjct:    6 FGGVLLAGQSSGTGTLMLGNTGLNWKSREGTRAVDVVKEEIGSLEWFRGMQGYLLRCKLRGGASVKFDGLKEVDFSTVRDFVAESWKGTGGDGGRGVELVMGKQLTSGWSWGRAQ-TVGAEMLMQEKEGN-----------REMFEIPLGDVSQVSMPSRN-EVALEFHVDDTMGPTDECLVEMRIAIPDIEEASKLYDGIKAKADTSAFAGESIASFDEVPVILPRGRYDVDLYPSHLKLHGKSADYKILYNSISRLFLLPKPDEVHVDFVMSLDPPIRQGNTMYPHLIFHFLNETAVETVLKLSESDLKTKYDDKIHKREEGELWKVFSKVTRTLTGKPLHVPKTFSSAHGQRAVRTALGANDGHIFLLESSFFFVVKPPTYIRFDDIEEIEFKRMDMEKRFDM--AVTTLSGNTFLFSNIDKVEFDNIHKFL-KSKKIPLSGTRE 437          
BLAST of Gvermi5860.t1 vs. uniprot
Match: M2WRZ7_GALSU (FACT complex subunit SSRP1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WRZ7_GALSU)

HSP 1 Score: 400 bits (1027), Expect = 2.780e-131
Identity = 213/454 (46.92%), Postives = 303/454 (66.74%), Query Frame = 0
Query:   11 FNTISTAGQALASGT--LRISRTGFAWRAKDTSRNLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHFGGKTLTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVP---VEGAEQLKRTGGRQQ 459
            +  +S AG   +SGT  LR+   G +WRAK+T+R + +   +LL + W+RG RG QL   LRG +T R EGFR  D+  + E   E    + + R  Q ++GW+WG+ ++   A   LIF +  G           + F++PL +V+ VQ+P +  E+AL+FHVDDTA K DE LVE+R Y+  E  A  +Y+ +   A++S F GESL +F  M + VPRGRY+VD+Y N++KL GK+ D+KILY+++ R+FLLPKPD   ++FV+SLDPP+RQGNT+YPHLVFQF  +E+   +  ++  +L+ +Y   L     G TW VFSK+L+ L+  PLH P +FKS    S VRTALGAN+G+LFFLE C FFVNKPPTY R++D++ +EF+RMDLERRFDL I L++G   SLLF+NI+R EF+ I++FL E K++P   ++ A + +RT   QQ
Sbjct:   15 YGGVSLAGTGASSGTGTLRVHSGGISWRAKETARTVDIDKENLLSLRWIRGARGMQLVCVLRGDNTNRFEGFREQDFEVVNESCKEKLSLE-VKRAPQPIKGWNWGDAELRGRA---LIFHSAEGV----------DAFDVPLEEVSQVQMPSSS-EVALEFHVDDTAAKTDECLVELRLYVHNESHAADLYKGILKSAESS-FTGESLINFVDMPLLVPRGRYEVDLYPNHLKLHGKSFDYKILYTAVTRMFLLPKPDEAHITFVVSLDPPVRQGNTLYPHLVFQFQKDEEVDAEFALTENELKSRYPN-LVGVSGGATWEVFSKILRELTKKPLHSPISFKSHRGQSAVRTALGANDGYLFFLENCMFFVNKPPTYIRFEDVEMIEFKRMDLERRFDLQITLSSG--HSLLFSNIDRPEFDNIYTFLEE-KRLPMSTIKEAFKRQRTPAEQQ 448          
BLAST of Gvermi5860.t1 vs. uniprot
Match: A0A7J7IDL8_9RHOD (FACT complex subunit SSRP1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDL8_9RHOD)

HSP 1 Score: 366 bits (940), Expect = 1.810e-117
Identity = 193/439 (43.96%), Postives = 285/439 (64.92%), Query Frame = 0
Query:   12 NTISTAGQALASGTLRISRTGFAWRAKDTSR-NLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHFGGKT-LTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEE-KTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEG 447
            ++I    Q+L +G+LR+S+ G  W  +      ++VA  DL  + W RG RG QL+ + + GST+  EGFRA+D  +   ++ E +   + + R  Q+V GW++G++ +       ++F TG            E  FE+P+  VA V   G   ELAL+FH+DDTA K DE LVEMRF  P E++A  ++ ++ AR   ++F GESL  F  +   VPRGRYD+++Y  Y+ + GK+ D+KILY ++ R+FLLPKPD I ++ V+SLDPPIRQGNT YPHLV Q   EE +  ++L ++ ++L+ +Y  KL     G  W+V +KVL+ L   PLH PK F +++    +RTALGAN+G+L+ LE C FFVNKPPTY RY+D+DFVEF+R++++RRFDL + + +G+  SLLFTN+ERSEF  ++ FL E+K+V + G
Sbjct:    8 DSIYVTDQSLGAGSLRLSKAGLLWTPRTEGLYTISVAREDLASLRWFRGARGDQLRCTRQDGSTVNFEGFRAADRVTFEAYIKETWAWTSGIPRGEQSVLGWNFGQIRILG---ETILFMTGS-----------ETAFELPISDVAQVVRSGRN-ELALEFHLDDTASKTDECLVEMRFQAPSEEEAVALHAELSARVGPASFTGESLAFFEELAFIVPRGRYDLELYPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRREEDEIEIELNMAEEELKRRYGDKLPSKLRGEPWQVVTKVLRALVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEMDRRFDLQVVMLSGS--SLLFTNLERSEFSALYHFL-ESKQVRMVG 428          
BLAST of Gvermi5860.t1 vs. uniprot
Match: M1VLQ6_CYAM1 (FACT complex subunit SSRP1 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VLQ6_CYAM1)

HSP 1 Score: 363 bits (931), Expect = 6.820e-116
Identity = 192/432 (44.44%), Postives = 285/432 (65.97%), Query Frame = 0
Query:   19 QALASGTLRISRTGFAWRAKDTSR-NLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHFGG-KTLTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEE-KTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEG 447
            Q+L  G+LR+S+ G  W  ++     ++VA  DL  + W RG RG QL+ + + GST+  EGFR +D +++ E+V E +   K + R  Q V GW++G++ +      +++F +G            E  FE+P+  ++ V   G   ELAL+FH+DDTAGK DE LVEMRF  P E+DA  ++ ++ AR  +++F GESL  F  +   VPRGRYD++++  Y+ + GK+ D+KILY ++ R+FLLPKPD I ++ V+SLDPPIRQGNT YPHLV Q   ++ +  V L +  ++LQ++Y  KL    SG  W+V +KVL+ L   PLH PK F +++    +RTALGAN+G+L+ LE C FFVNKPPTY RY+D+DFVEF+R++++RRFDL + +  G+  +LLFTN+ERSEF  ++ FL E+K+V + G
Sbjct:   15 QSLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEG---ESVLFVSGS-----------ETAFELPISDISQVVRSGRN-ELALEFHLDDTAGKTDECLVEMRFQAPTEEDAIALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEMDRRFDLQVVMLNGS--TLLFTNLERSEFSTLYQFL-ESKQVRMVG 428          
BLAST of Gvermi5860.t1 vs. uniprot
Match: A0A7S0ZKL3_9RHOD (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKL3_9RHOD)

HSP 1 Score: 294 bits (753), Expect = 1.590e-92
Identity = 151/256 (58.98%), Postives = 194/256 (75.78%), Query Frame = 0
Query:  203 VKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLE-RRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEGAEQLKRTGGR 457
            V+A+ADTSAFAGES+ SF  + + VPRGRY+VD++ N++KL GK+VD+KILY+S+ RLFLLPKPD + V+FV+SLDPP+RQGNT YPHLVFQF  +E   + L +S +D  EKY  KL   ESG  WRVFSKV+++LS  PLHVPKTF S      VRTALGANEG+LFFLE+   FVNKPPTY R+D+ID VEF+RM++  R FD  + +T G+  ++LF+NIER+EFEPI+ FL E  K+P+E    + RT  R
Sbjct:    2 VRAKADTSAFAGESIASFKDLPLFVPRGRYEVDLFPNHLKLHGKSVDYKILYTSVTRLFLLPKPDELHVAFVISLDPPVRQGNTHYPHLVFQFLNDETIDLQLKMSEKDRVEKY-DKLKTEESGELWRVFSKVMRSLSKKPLHVPKTFLSHHEQRAVRTALGANEGYLFFLESSLMFVNKPPTYVRFDEIDLVEFKRMEVNPRSFDFSVLMTNGS--TILFSNIERTEFEPIYGFL-EKHKIPMEPVPSVFRTKSR 253          
BLAST of Gvermi5860.t1 vs. uniprot
Match: A0A8H7QB10_9FUNG (FACT complex subunit POB3 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7QB10_9FUNG)

HSP 1 Score: 263 bits (671), Expect = 7.770e-78
Identity = 159/466 (34.12%), Postives = 256/466 (54.94%), Query Frame = 0
Query:    9 LSFNTISTAGQALASGTLRISRTGFAWRAKDTSRNLAVAASDLLRVEWLRGGRGHQLKLSLRGGSTLRLEGFR--ASDYS-SIAEFVSEHFGGKTLTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIPLGKVANVQLPGNGKELALDF------HVDDTAGKMDEELVEMRFYIP-------------EEKDAEKV------YEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRMDLE-----RRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETK 441
            L F++I + G     G  R++  G  W+  D +  + +AA+++ +  WLR  RGH+L+++L+ GS  + +GF+  A + + ++     +    K L+     +RGW+WG+   T     NLIF  G            +E FE+PL +      PG   E+A++F        D    K+ +EL+++ FYIP             +E+DAE+V      YE VK++ +      E++  F  +    PRGRY++DM+ ++++LRGK+ D+KI+YSSII+LFLL KPD + V FV+ LDPP+RQG T YP LVFQF  +E+  VDL +  + L+EKY GKL +T    T+ + S V + L+   + VP  F+S     G+++++ ANEG+L+ LE C  F+ KPPT+  + +I  V F R+        R FD+  ++ TG +    F++I R E+  +  F+   K
Sbjct:    7 LDFDSIHS-GLDSTVGRFRLAPNGIGWKGSDETTKI-IAANEIRKFTWLRVARGHELRITLKDGSVSKFDGFKKEAKELNHAVKSMYKQQLESKELS-----LRGWNWGK---TEFQGPNLIFNVGN-----------KEMFELPLSQAIGANKPGKN-EVAVNFVDPGQKPADGINPKLTDELMDITFYIPGTVPKEENADGNTDEEDAEEVNADAVFYENVKSKLELGQLTSENIVQFQEVLCLTPRGRYNIDMFQDFLRLRGKSYDYKIMYSSIIKLFLLLKPDEVHVMFVIGLDPPLRQGQTKYPFLVFQFVRDEEIDVDLNLDEETLKEKYDGKLQKTYDAPTYEIVSTVFRALTGRKVTVPSNFRSHHGALGIKSSMKANEGYLYPLEKCFLFIPKPPTFIPHSEIGVVTFSRVSASSGGSSRTFDMKFSMKTGHDYQ--FSSINREEYANLEEFIKSKK 448          
The following BLAST results are available for this feature:
BLAST of Gvermi5860.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRN7_9FLOR2.140e-30188.63FACT complex subunit SSRP1 n=1 Tax=Gracilariopsis ... [more]
R7QG91_CHOCR6.840e-24676.91FACT complex subunit SSRP1 n=1 Tax=Chondrus crispu... [more]
A0A1X6P6F0_PORUM1.510e-16153.26FACT complex subunit SSRP1 n=1 Tax=Porphyra umbili... [more]
A0A5J4YMW4_PORPP9.940e-14249.68FACT complex subunit SSRP1 n=1 Tax=Porphyridium pu... [more]
A0A7S1TCE2_9RHOD2.980e-13447.77FACT complex subunit SSRP1 n=1 Tax=Compsopogon cae... [more]
M2WRZ7_GALSU2.780e-13146.92FACT complex subunit SSRP1 n=1 Tax=Galdieria sulph... [more]
A0A7J7IDL8_9RHOD1.810e-11743.96FACT complex subunit SSRP1 n=1 Tax=Cyanidiococcus ... [more]
M1VLQ6_CYAM16.820e-11644.44FACT complex subunit SSRP1 n=1 Tax=Cyanidioschyzon... [more]
A0A7S0ZKL3_9RHOD1.590e-9258.98FACT complex subunit SSRP1 (Fragment) n=1 Tax=Tims... [more]
A0A8H7QB10_9FUNG7.770e-7834.12FACT complex subunit POB3 n=1 Tax=Umbelopsis vinac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 249..265
score: 66.18
coord: 422..440
score: 30.92
coord: 364..382
score: 36.84
coord: 382..399
score: 50.69
coord: 227..243
score: 44.85
coord: 337..350
score: 30.36
coord: 272..288
score: 67.65
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 356..447
e-value: 3.1E-17
score: 73.3
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 358..441
e-value: 3.1E-17
score: 62.7
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 7..96
e-value: 3.6E-18
score: 67.6
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 347..453
e-value: 1.4E-24
score: 88.2
NoneNo IPR availableGENE3D2.30.29.150coord: 207..345
e-value: 1.7E-47
score: 162.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..481
NoneNo IPR availablePANTHERPTHR45849FACT COMPLEX SUBUNIT SSRP1coord: 11..512
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 11..512
NoneNo IPR availableCDDcd13230PH1_SSRP1-likecoord: 213..347
e-value: 5.41363E-63
score: 200.063
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 213..440
IPR038167SSRP1 domain superfamilyGENE3D2.30.29.220coord: 99..199
e-value: 2.0E-19
score: 71.2
IPR035417FACT complex subunit POB3-like, N-terminal PH domainPFAMPF17292POB3_Ncoord: 10..97
e-value: 7.9E-20
score: 71.1
IPR024954SSRP1 domainPFAMPF03531SSrecogcoord: 110..192
e-value: 3.2E-13
score: 49.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:385805..387349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5860.t1Gvermi5860.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 385805..387349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5860.t1 ID=Gvermi5860.t1|Name=Gvermi5860.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=515bp
MATDDGLFLSFNTISTAGQALASGTLRISRTGFAWRAKDTSRNLAVAASD
LLRVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIAEFVSEHFGGKT
LTRVNQAVRGWSWGELDVTSGAASNLIFRTGGGSNVRTKALQFEETFEIP
LGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFYIPEEKDAEKVY
EQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDF
KILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEK
TRVDLPISAQDLQEKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKTF
KSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYTRYDDIDFVEFRRM
DLERRFDLFIALTTGTNQSLLFTNIERSEFEPIFSFLHETKKVPVEGAEQ
LKRTGGRQQVRIMDGEDDSESDDDDFDPEAQEKEVVSESSSGSEDEMTDE
ADSASKPARKKKKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR013719DUF1747
IPR011993PH-like_dom_sf
IPR038167SSRP1_sf
IPR035417POB3_N
IPR024954SSRP1_dom