Gvermi5815.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5815.t1
Unique NameGvermi5815.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1541
Homology
BLAST of Gvermi5815.t1 vs. uniprot
Match: A0A2V3IRP8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRP8_9FLOR)

HSP 1 Score: 1645 bits (4261), Expect = 0.000e+0
Identity = 913/1427 (63.98%), Postives = 1097/1427 (76.87%), Query Frame = 0
Query:    9 FKRVAAARYAPLVQLSATQHCDAAVRTA-SKHRDVLSLLNQFLPANSRLPLRLLTPAQLKETSARSFARTLLDGARDVDGGLFAITHALKERLESLTTAYRHEWFALPLLNVVAVWVCEPQIAEAVSSTSMHDAPLVLLVTRPTAQDNAALQKVLQSLSSHPAPLLVLRLSDQNETQTSERDXXXXXXXXXXXXXXXXAAVAAQLDSRAR-----AILNAQLSEAVAAADTARKAVRSSFRLWFSTSSSSTTFMPASDTNSAAHATMEPSSSGGDATRLASNSVAGAMRRLADLALMAGRYTDACDAYRMLAYEVRTFSSSAAVHHASALELGALSLALIDGSNAAIGAALESAVLRYVDANSPELAARAALRAVDFCLAAGYPDSAAGVLVRAIVALRPCVSDAT-PPLVDAVLALLCASCTHAYVLLKHARRASRFAFFAALRFAKLRYFAEAAAAAAEIDSSALQRPAIRHHVQYWMGEAALSGANPVSAVRHFSLVLTEAEASAQPSTVEVHASVVRAFLRALKIGAMEKLSARWDSGVPFPLLDTAFSYVLTHDMADCDREWHGLEDEVLEDAEFFAKLARGEEN-VKRERRVEALVSELRHAKRSGQNDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAVLGEVVLLHIRLRNPLQFPVFVSSMSAVVLLDGRCYSLFEKSDEGGDADPPP-VELLEAPAFTLAPNSEEIVVLQIVGRKAGILQFIGVSWKFTIGLNATFVPDFSTVLAPGFALLHRHGRRLNDTRRQRASDVPLYDEDESLTVTVAPLAPKLKATLLVPHFPLVSQDLH-PTLTMRAGEVRRGHLELENEGSTALHSIVFRIGTPQTFYLGIEPEIQEKGEKKRVFSIGIKEQPVEQNEVVVAGRLTLPLAPGHKTRIPMWIRAAVSNALFTHRSSLSENIKLQRTSR-RGEDRAENGPPLRDVKLAIAYGAGRLRISRVSLRFRVHPSVMVSPRFLREADLRSVSPDASNRIGCLFGVEVEHAGPSEMEGVDFDITKLTVTSKHGWKPMLLPAPVIPMAIKRGDLQPSLSTLRINETATFFVFLVRDRDVKDGCQVTDSRDGLLRPSHKWETYVADLNANSVMKKEVKGLDSEAQGALGEDMVKADGCRDEDRWERRAVTHFVVCSKHHSHLHRHKEPHERPDRVYVTVGWRTNEESEGDIQIPAIDPLRWMKETRSVPDAGNDGALIAQEEVRQANPNVMQDVVEGIGALHMNYCEKDPVQVRVCHPQRVEHDFFRRAGDDVLGLVGEQNAVIVYPAVVAVDVLVKNVSDGVLDVAFAAPTEGGVADGDRGRYWTGDVSMSLRSIAPGAERTICLTAVLIGPGRYNMCRFTMLYQTSSFVPNRRRQHIAVSPSYMTVEAIGEYKFGEDDVSEAQMEMASLR------RISRRMST 1418
            FKR AAAR+AP +QL AT HCDAAVRTA + HR++ SLL+ +LP ++  PLR+LT   +  T  R+  R LLD  RD    L  ++ AL +RLES T A  H+ FALPLL VVAVWVCEP I+ A+++   H  PLVLLV RPTAQD  ALQ+V QSL+SHPAP+LVLR             XXXXXXXXXXXXXXXX                 A LN +L++A  AA+  R++ R+SFR WFSTS++ST         S + + +  ++S  DATRLA N+VA AMR+LADLALMAGRYTDAC+AYR LA EVR+ SS+A+VHHASALE+ A+SLAL+DGSN+AIG+A ESA++RY DAN PELAARAALRAV FCLAAG+PDSAAGVLVRAI  LRP  +  + PPL+D VLA LCA+C  A+  LKH RRASRFAFFAA+ FA+LR+F  AA  A  +D+SALQRP+IRHHVQYWMGEAALS + PV+AVR+FS VL EA+ S Q   +++++SVV+AFLRALK GA E+LSARWDSGV FPLL+ AFS+V THDM D D EWH LEDEVLED EFF KLA G +  V+RERRVEALVSELRHAKRSG+NDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAV+GE V LH RL NPLQFPV++SS+SAVV LDG+CYSLF+K ++  D DPPP V+L EA   T+  NS   VVL+IV  KA  LQFIG+ WKF+IG+  TF+PD +TV APGFALLHR GRRLNDTRR RASDVPLY+ED+SLTVT+AP+APKLKA L +PHFPL  QD   P L MRAGEVR+GHLELEN+G   L SIV RIGTPQT YLG++ E++ +GE+KRVF+IG+KEQPVEQ+E+V A R++L L PG  TRIP+WIRAA+++A F  RS LSENIKLQR    R +DR + G P RD+KLAIAYG+ + R+SRVS+ F+VHPS+MVSPRFLREADLR +SP AS++IGCLFGVEVEHAGPSE E  DFDIT+LTVTS+HGWKPMLLP PV+P A K  D++P+ +TLRINETATFFVFLVR+RDVK+  +    RD     +H W TY+   +      +++K ++  +  AL  D+ K D   D+ +W+R A THFVVCSKHH ++HRH   ++R DRVYVTVGWRT++ +EGDI IP+IDPLRWMK+++   D+G + A  A E   Q NPNVMQDVVEGIGAL  N  E+DPVQVRVCHP +VEHDFFR +         +Q++ + YPAVV VDVLVKNVS GVLDVAFAA TEGGVADGDRGRYWTGDVSMSLR+IAPGAERTICLTAVLI PGRYNMCRFTMLYQTSSFVPNR+RQHI++ PS+MTVEA+G+YKF EDD    +++ A L       RI +R+ST
Sbjct:   22 FKRRAAARHAPSLQLRATLHCDAAVRTADATHRNLRSLLSAYLPNSAAPPLRVLTAEHVAITPPRALPRALLDSLRDPPSRLAKLSDALLDRLESATLALSHDIFALPLLTVVAVWVCEPDISAALAAFPTHQPPLVLLVARPTAQDAHALQRVQQSLASHPAPVLVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLNLRLNDAALAANRIRRSTRTSFRSWFSTSTTSTXRTSDDSHLSVSTSDLTAATSTSDATRLAPNTVAFAMRQLADLALMAGRYTDACEAYRNLAAEVRSLSSAASVHHASALEMEAISLALLDGSNSAIGSAFESAIVRYSDANRPELAARAALRAVHFCLAAGFPDSAAGVLVRAITLLRPSEAQTSAPPLLDVVLATLCAACADAFTRLKHMRRASRFAFFAAVSFARLRHFVAAATVATAVDASALQRPSIRHHVQYWMGEAALSSSKPVAAVRNFSSVLAEAQPSPQSCDLQLYSSVVQAFLRALKNGAAERLSARWDSGVAFPLLEVAFSFVQTHDMGDTDSEWHALEDEVLEDVEFFEKLANGRKTGVQRERRVEALVSELRHAKRSGKNDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAVIGEPVFLHARLTNPLQFPVYMSSLSAVVSLDGQCYSLFDKQNKNTDTDPPPPVQLFEAEPLTIPANSSRDVVLRIVACKARTLQFIGLCWKFSIGMLPTFIPDDNTVFAPGFALLHRRGRRLNDTRRHRASDVPLYEEDKSLTVTIAPVAPKLKAELCIPHFPLSMQDEDDPNLIMRAGEVRKGHLELENDGPMPLDSIVLRIGTPQTLYLGLQLEVEGEGEQKRVFAIGMKEQPVEQSEIVAAARVSLQLDPGESTRIPVWIRAAINSAAFAQRSPLSENIKLQRRQNSRNDDRTDGGLPQRDIKLAIAYGSEQPRMSRVSMSFKVHPSIMVSPRFLREADLRMISPQASDKIGCLFGVEVEHAGPSETEDADFDITELTVTSRHGWKPMLLPKPVVPKAAKNLDIRPAPNTLRINETATFFVFLVRNRDVKENVE----RDSTEPHAHMWGTYICHFDNEPHACRDMKEVELLSPTALNNDLSKGDVNEDDHKWDRCATTHFVVCSKHHLNVHRHGNSYDRLDRVYVTVGWRTSDGNEGDIHIPSIDPLRWMKDSKKA-DSGQENAPPAVEAQSQVNPNVMQDVVEGIGALQANDYEEDPVQVRVCHPLKVEHDFFRNSEVGNNDSTDDQSSAVAYPAVVPVDVLVKNVSSGVLDVAFAASTEGGVADGDRGRYWTGDVSMSLRAIAPGAERTICLTAVLISPGRYNMCRFTMLYQTSSFVPNRKRQHISMKPSFMTVEAVGDYKFCEDDALVDRIDTAPLMPSRRKSRIPKRIST 1443          
BLAST of Gvermi5815.t1 vs. uniprot
Match: A0A7S1XAP5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAP5_9RHOD)

HSP 1 Score: 84.3 bits (207), Expect = 8.170e-13
Identity = 97/375 (25.87%), Postives = 158/375 (42.13%), Query Frame = 0
Query:  711 LAPNSEEIVVLQIVGRKAGILQFIGVSWKFTIGLNATFVPDFSTVLAPGFALLHRHGRRLNDTRRQRASDVPLYDEDESLTVTVAPLAPKLKATLLVPHFPLVSQDLHPTLTMRAGEVRRGHLELENEGSTALHSIVFRIGTPQTFYLGIEPEIQEKGEKK-RVFSIGIKEQPVEQNEVVVAGRLTLPLAPGHKTRIPMWIRAAVSNALFTHRSSLSENIKLQRTSRRGEDRAENGPPLRDVKLAIAYGAGR-----LRISRVSLRFRVHPSVMVSPRFLREADLRSVSPDASNRIG-CLFGVEVEHAGPSEMEGVDFDITKLTVTSKHGWKPMLLPAPVIPMAIKRGD---LQPSLSTLRINETATFFVFLVRD 1075
            L  +S+  V L +   KAG  + + + W F + L      + S    P    + R+G+RLN TR++R S VPLY  + SL V V     ++   L          + + +  +R G+   G +++ N+GS+ + SI    GTP + +   +P+  E  EK+ R F                  R  L +  G     P W+RA   N+       +S  +++                +   K+ +  G GR      RI+R+     V P ++  PRFLR       +P    R    + GVE+EH+      G  + I +L V++   WK   L  P  P  +   +   ++ S   LR+NETAT F+ L R+
Sbjct:    5 LDQHSKVQVTLSVRPSKAGDARLVALRWSFFL-LGE---ENESQHACPCRVEIRRNGQRLNSTRKERCSPVPLYGPENSLRVRVCKGGSRITVRL----------NSNVSSYVREGQQWVGSVDVLNQGSSPVRSIHVTNGTPSSIFF--DPDSCEISEKRNRSF------------------RCNLTIVEGESFCHPCWLRATSGNS-----DGISNLVRV----------------VFFYKVDLVDGKGRDLGQVWRIARLRHTVEVKPCIVAFPRFLRS------NPFIQGRSREFILGVEIEHSWTEG--GETYRIVELGVSASSCWKVTGLCTPSYPSVLSEEEVAKIRNSPVQLRVNETATLFLTLRRN 316          
The following BLAST results are available for this feature:
BLAST of Gvermi5815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRP8_9FLOR0.000e+063.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XAP5_9RHOD8.170e-1325.87Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024420TRAPP III complex, Trs85PFAMPF12739TRAPPC-Trs85coord: 233..458
e-value: 2.3E-12
score: 46.6
IPR024420TRAPP III complex, Trs85PANTHERPTHR12975TRANSPORT PROTEIN TRAPPcoord: 234..989
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1413..1432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1413..1540
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 411..430
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..642
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 643..660
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..410
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 661..1540

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:172466..177088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5815.t1Gvermi5815.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 172466..177088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5815.t1 ID=Gvermi5815.t1|Name=Gvermi5815.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1541bp
MGDDAVRQFKRVAAARYAPLVQLSATQHCDAAVRTASKHRDVLSLLNQFL
PANSRLPLRLLTPAQLKETSARSFARTLLDGARDVDGGLFAITHALKERL
ESLTTAYRHEWFALPLLNVVAVWVCEPQIAEAVSSTSMHDAPLVLLVTRP
TAQDNAALQKVLQSLSSHPAPLLVLRLSDQNETQTSERDASERNATERDA
SELSAAAVAAQLDSRARAILNAQLSEAVAAADTARKAVRSSFRLWFSTSS
SSTTFMPASDTNSAAHATMEPSSSGGDATRLASNSVAGAMRRLADLALMA
GRYTDACDAYRMLAYEVRTFSSSAAVHHASALELGALSLALIDGSNAAIG
AALESAVLRYVDANSPELAARAALRAVDFCLAAGYPDSAAGVLVRAIVAL
RPCVSDATPPLVDAVLALLCASCTHAYVLLKHARRASRFAFFAALRFAKL
RYFAEAAAAAAEIDSSALQRPAIRHHVQYWMGEAALSGANPVSAVRHFSL
VLTEAEASAQPSTVEVHASVVRAFLRALKIGAMEKLSARWDSGVPFPLLD
TAFSYVLTHDMADCDREWHGLEDEVLEDAEFFAKLARGEENVKRERRVEA
LVSELRHAKRSGQNDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAVL
GEVVLLHIRLRNPLQFPVFVSSMSAVVLLDGRCYSLFEKSDEGGDADPPP
VELLEAPAFTLAPNSEEIVVLQIVGRKAGILQFIGVSWKFTIGLNATFVP
DFSTVLAPGFALLHRHGRRLNDTRRQRASDVPLYDEDESLTVTVAPLAPK
LKATLLVPHFPLVSQDLHPTLTMRAGEVRRGHLELENEGSTALHSIVFRI
GTPQTFYLGIEPEIQEKGEKKRVFSIGIKEQPVEQNEVVVAGRLTLPLAP
GHKTRIPMWIRAAVSNALFTHRSSLSENIKLQRTSRRGEDRAENGPPLRD
VKLAIAYGAGRLRISRVSLRFRVHPSVMVSPRFLREADLRSVSPDASNRI
GCLFGVEVEHAGPSEMEGVDFDITKLTVTSKHGWKPMLLPAPVIPMAIKR
GDLQPSLSTLRINETATFFVFLVRDRDVKDGCQVTDSRDGLLRPSHKWET
YVADLNANSVMKKEVKGLDSEAQGALGEDMVKADGCRDEDRWERRAVTHF
VVCSKHHSHLHRHKEPHERPDRVYVTVGWRTNEESEGDIQIPAIDPLRWM
KETRSVPDAGNDGALIAQEEVRQANPNVMQDVVEGIGALHMNYCEKDPVQ
VRVCHPQRVEHDFFRRAGDDVLGLVGEQNAVIVYPAVVAVDVLVKNVSDG
VLDVAFAAPTEGGVADGDRGRYWTGDVSMSLRSIAPGAERTICLTAVLIG
PGRYNMCRFTMLYQTSSFVPNRRRQHIAVSPSYMTVEAIGEYKFGEDDVS
EAQMEMASLRRISRRMSTGSTVTPTSQVGKRWSSVPRERGSSGAGTEDDV
GPHAGTNDGSGARQLKHINCGTASGDGGEGGAGRVSGRQGTQESRGKEGS
AARAGGGAMSGARGEGRSAQLLSELKKDAFWNDADTDEEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024420TRAPP_III_complex_Trs85