Gvermi5809.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5809.t1
Unique NameGvermi5809.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length249
Homology
BLAST of Gvermi5809.t1 vs. uniprot
Match: A0A2V3IL71_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL71_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 4.290e-49
Identity = 99/252 (39.29%), Postives = 152/252 (60.32%), Query Frame = 0
Query:    4 LRYTIG-LFLVACVTALPVEDLTKLSIVKDVKYVKQAVHVAASFQ-------SNSSEVINEFSVSRGRVTSGTLSCRGICKGTMSYDITINGVSSEYLDSKDRIFREALNSNQIAMYDSAKSSYGGGLNVPFLRGVGINLGGSYSQEQVDEASQRLENYDSLADAARNIMESFDMVSVRVWGRLEVTSYTSIESVATAYVKFAKVTLLDGSELRVVSSSGADVSAVDNRGTELPVENWEGGADQKSDGDNFF 247
            LR   G +F++   +ALP+EDL  + +VKDV+Y    V +++  +         S+ V   FS+S G V+     C+G+C+ T+ +++ +NG +S +L+  DR F+ AL S+Q  +Y ++K +YGGGL +PF+R +G NLG  Y+++ VD A + +ENYD LA+AAR+I+ SF   +VR+ G + + SY+ I S     +KFA+VTLLD S L V SS G D+     RGT   +EN  G   Q+    N F
Sbjct:    4 LRQLFGFIFILTLASALPLEDLKSVGVVKDVEYFDHQVPISSRSEIVGVPDKEESTYVAKRFSLSNGVVSRADSYCQGLCETTLHFNMVLNGAASSFLEKTDRKFQSALTSSQKEIYANSKRNYGGGLRIPFMRVLGFNLGARYTKQNVDNAREHIENYDELANAARSILSSFQNATVRIKGTVRIRSYSQIPSRGYVSIKFARVTLLDSSVLNVFSSLGEDLGT--GRGT---LENLSGAGAQQETYQNEF 250          
BLAST of Gvermi5809.t1 vs. uniprot
Match: A0A2V3IL72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL72_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 1.740e-29
Identity = 76/225 (33.78%), Postives = 127/225 (56.44%), Query Frame = 0
Query:   22 EDLTKLSIVKDVKYVKQAVHVAASFQSNSSEVINEFSVSRGRVTSGTLSCRGICKGTMSYDITINGVSSEYLDSKDRIFREALNSNQIAMYDSAKSSYGGGLNVPFLRGVGINLGGSYSQEQVDEASQRLENYDSLADAARNIMESFDMVSVRVWGRLEVTSYTSIESVATAYVKFAKVTLLDGSELRVVSSSGADVSAVDNRGTELPVENWEGGADQKSDGDNF 246
             +L  L++VK V+++   +     ++   ++V+++ ++  G +   TL+ R   + + S++  I+GV+S YL + D IF   +NS +  +Y+ AK  Y GGL++PFLR +GI+L  S+S +       R + Y   A AAR IM+SF    +R+ G + V   +   S A  +VKF++VTL+D + L VVSS+  DV A D+    LP+E  E    Q+  G+ F
Sbjct:   25 SNLQNLALVKTVEHIHHELREVVKYE-RETQVLSDHALLFGPIGQATLNVRLGLRASFSFNYRIDGVTSAYLAASDHIFTSTMNSRERILYEEAKRGYNGGLDIPFLRQLGIHLNESHSLDA--NLVSRDDYYALKAIAARQIMQSFRGGKLRINGTISVIGVSEQPSTARVFVKFSRVTLVDNTVLHVVSSNNDDVVAGDDSHNMLPIETLESNVAQEEFGNPF 246          
BLAST of Gvermi5809.t1 vs. uniprot
Match: R7Q301_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q301_CHOCR)

HSP 1 Score: 77.4 bits (189), Expect = 3.060e-14
Identity = 44/132 (33.33%), Postives = 72/132 (54.55%), Query Frame = 0
Query:  100 FREALNSNQIAMYDSAKSSYGGGLNVPFLRGVGINLGGSYSQEQVDEASQRLENYDSLADAARNIMESFDMVSVRVWGRLEVTSYTSIESVATAYVKFAKVTLLDGSELRVVSSSGADVSAVDNRGTELPVE 231
            F E L + +   ++   S++ G L +P    +G+N   S S EQ+ EA++ +EN+++   A   I+ES     +R+ G L  T  ++I +VA A+++   V+  DGS L VVS++  DV A D  G   P E
Sbjct:    5 FVETLTAEERVQFEELVSNFDGSLKLPIFELLGLNFAESISTEQIAEAAESIENFETKTTAIEEILESVVDSEIRITGTLSATGQSNIPTVAFAFIEVTDVSFDDGSNLLVVSNNPNDVVAADIDGAVQPSE 136          
BLAST of Gvermi5809.t1 vs. uniprot
Match: R7Q6J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6J5_CHOCR)

HSP 1 Score: 64.7 bits (156), Expect = 7.670e-9
Identity = 46/159 (28.93%), Postives = 76/159 (47.80%), Query Frame = 0
Query:   65 TSGTLSCRGICKGTMSYDITINGVSSEYLDSKDRIFREALNSNQIAMYDSAKSSYGGGLNVPFLRGVGINL------GGSYSQEQVDEASQRLENYDSLADAARNIMESFDMVSVRVWGRLEVTSYTSIESVATAYVKFAKVTLLDGSELRVVSSSGAD 217
            T G    RG    T+S+ IT++G+S+  +  KD I++  L  +    Y   K++Y GGLN+PF+  +G +L      GG   + +V +     + ++    A   I+       V++ G   VT  + I      YVK A+VT  DG  + +VS+   D
Sbjct:   61 TFGVSVTRG-ATATISFSITLSGISAVEMAKKDAIYQNILTGSLKKTYMRRKNAYKGGLNLPFMADIGADLRRRKLNGGELRKSRVSK-----QLFERRLCAVSKILGGVRRARVQIRGSRRVTGTSLIPRTVYGYVKVARVTRTDGKTITIVSTDPRD 213          
The following BLAST results are available for this feature:
BLAST of Gvermi5809.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IL71_9FLOR4.290e-4939.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL72_9FLOR1.740e-2933.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q301_CHOCR3.060e-1433.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q6J5_CHOCR7.670e-928.93Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..164
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:148645..149391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5809.t1Gvermi5809.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 148645..149391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5809.t1 ID=Gvermi5809.t1|Name=Gvermi5809.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=249bp
MIALRYTIGLFLVACVTALPVEDLTKLSIVKDVKYVKQAVHVAASFQSNS
SEVINEFSVSRGRVTSGTLSCRGICKGTMSYDITINGVSSEYLDSKDRIF
REALNSNQIAMYDSAKSSYGGGLNVPFLRGVGINLGGSYSQEQVDEASQR
LENYDSLADAARNIMESFDMVSVRVWGRLEVTSYTSIESVATAYVKFAKV
TLLDGSELRVVSSSGADVSAVDNRGTELPVENWEGGADQKSDGDNFFF*
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