Gvermi5742.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5742.t1
Unique NameGvermi5742.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length717
Homology
BLAST of Gvermi5742.t1 vs. uniprot
Match: A0A2V3IV84_9FLOR (Putative ATP-dependent RNA helicase DHX35 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV84_9FLOR)

HSP 1 Score: 1182 bits (3058), Expect = 0.000e+0
Identity = 589/714 (82.49%), Postives = 655/714 (91.74%), Query Frame = 0
Query:    1 MKRKRTAAVAVVEKDQSLPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILDNSPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFFRNGTDLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTSGHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTETGELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLEDSSSEDLVRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWVPLHSGNYFKTKNLGVED 714
            MKRKRT+   VV++D SLP++QKS +ILSALAANDVLILVS+TGSGKTTQLPQIILDN+PNSS+L+TQPRRVAAITVATRVAAER + LGD+VGYAVRFENKSSRT TRIRYVTDGVLLRETLTDGFSALKRRYSH+IIDEVHERSVNTDIVLGV++E L P  +P  KQN   GL  LLRSKL FKVV+MSATTDAEKIA FFRNGT L+VK LGISG  +KVN MFATEPV+DYVDGAVEAALQVHTGYS SGHILVFLPGQEDIMSAIGLLK KLRHR SK+QRRSVIILPLFAAQ P EQLRAI+DLP+SMRATHRKIIF+TNIAETS+TIPG++YVVDSGVAKVRTL+P NGLYT+VLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQ+H+NKLEKYP PEILR DAT+TQLQIIAL HFGR+RPEQNHLRF +L+KIPRHARERALETLYALGALD NMKLTETGELMARIP +PMLARSLLESLRLGC+DSMLSTAA+LSVEGSIFLRP NK++QAKAAHRRF+S  GDHLTLVN LHAY+QRAP RK EFCKDHFLNHRTL+ A+++RNQLSV++QH DMVSWGLTHPF   V+E+LE+S  EDLVRRCLV+G+FR+IARRR+EDGKYVPIGNVK +GS E GVD+HPS SFR F+Q+KIP+LV+YDELVWTTK+Y+RTVCSIEHAWVPLHS NYFK +N GV++
Sbjct:    1 MKRKRTSEPVVVKRDTSLPILQKSNEILSALAANDVLILVSDTGSGKTTQLPQIILDNAPNSSILITQPRRVAAITVATRVAAERGATLGDTVGYAVRFENKSSRTSTRIRYVTDGVLLRETLTDGFSALKRRYSHLIIDEVHERSVNTDIVLGVVKEALEPSGSPATKQNAPTGLGALLRSKLEFKVVLMSATTDAEKIAQFFRNGTSLNVKQLGISGIMHKVNTMFATEPVADYVDGAVEAALQVHTGYSNSGHILVFLPGQEDIMSAIGLLKGKLRHRFSKEQRRSVIILPLFAAQSPVEQLRAISDLPESMRATHRKIIFSTNIAETSVTIPGITYVVDSGVAKVRTLVPQNGLYTDVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQDHFNKLEKYPIPEILRIDATSTQLQIIALKHFGRRRPEQNHLRFSMLNKIPRHARERALETLYALGALDKNMKLTETGELMARIPASPMLARSLLESLRLGCIDSMLSTAAVLSVEGSIFLRPSNKLEQAKAAHRRFLSPCGDHLTLVNVLHAYLQRAPTRKTEFCKDHFLNHRTLSVAEDVRNQLSVVMQHGDMVSWGLTHPFPPAVMEELEESGMEDLVRRCLVSGFFRNIARRRNEDGKYVPIGNVKAVGSFEQGVDVHPSSSFRAFRQRKIPSLVIYDELVWTTKMYIRTVCSIEHAWVPLHSSNYFKVRNFGVDE 714          
BLAST of Gvermi5742.t1 vs. uniprot
Match: R7QJF5_CHOCR (Similarity to pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJF5_CHOCR)

HSP 1 Score: 736 bits (1901), Expect = 5.810e-257
Identity = 404/736 (54.89%), Postives = 522/736 (70.92%), Query Frame = 0
Query:    1 MKRKRTAAVAVV---EKDQSLPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILDNSPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFG-----LAGLLRSKLAFKVVIMSATTDAEKIAHFFRNGTDLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTSGHILVFLPGQEDIMSAIGLLKAKL-RHRL---SKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTH-FGRKR------------PEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTETGELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQR-APMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLEDSSSEDLVRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEH----GVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWVPLHSGNYFK 706
            MKRKR+A   +    E+ +SLPV QK+  ILS LA NDVLI++ ETGSGKTTQ+PQII+++  ++SV+VTQPRRVAAITVATRVA ER   LG  VGYAVRF +KS R +T IRYVTDGVLLRE L +G   LK+RYSHVIIDEVHER++NTDI+LGVI+ETL   +    K    F       A ++RSKLAFKVVIMSATT+A+KIA FFRN + L V  L I+GRT+ V +M++  PV DY+DG+V+  +Q+H+G   +G ILVFLPGQE+I+SAI + K +L RH+    SK+  R + +  LFA+    +QL+AI  LP+ +R   RK+IFATNIAETSITIP + YVVDSGV KVR ++   GL+ +VL VQP+S+AQA+QRKGRAGRT PG+LFRLY ++ YN +E YP+PE+LRTDA+A+ LQI++L   F + R            P     RFPLLD+IP+     A+E L  LGA+D ++KLT  G LM+R+P  PMLAR LLESLR+GCV+SM+  AA+LSVEG+I + P  K D+AKAAHRRF+S  GDHLTL+N L+A++      R+ EFC+DHFLN+RTL SA++IR QLS IL    MVSWGL++P S  +  D+E +  E+LVRRCLVAG+FR  A++  E G Y+P+G        +      +DIHPS S R  + ++ P  V+YDE V TTK YLRTV S E AW+  H  +YF+
Sbjct:    1 MKRKRSADQFLFRPSEEVKSLPVRQKTNRILSELAGNDVLIVIGETGSGKTTQIPQIIVESDSSASVVVTQPRRVAAITVATRVAEERNVELGMQVGYAVRFADKSRRGLTNIRYVTDGVLLREALAEGSIGLKKRYSHVIIDEVHERAMNTDILLGVIKETLLAESAKNAKPQTGFAAKNEMFARMIRSKLAFKVVIMSATTNADKIAEFFRNKSSLRVSVLKIAGRTHDVQVMYSCSPVPDYIDGSVDTVIQIHSGQPMNGDILVFLPGQEEILSAIAITKERLKRHKSGKSSKEPNRELRVCSLFASLSSDDQLQAIEPLPEELRPGVRKVIFATNIAETSITIPNIVYVVDSGVVKVRKMMQDEGLFADVLAVQPVSKAQADQRKGRAGRTAPGFLFRLYVEKEYNGMEDYPQPEVLRTDASASVLQIVSLCKAFAKSRSATQTEKIKKLKPGAEVTRFPLLDRIPQPFMISAVENLILLGAVDKSLKLTNAGVLMSRLPVPPMLARCLLESLRVGCVESMIGVAAVLSVEGAILMSPTAKRDKAKAAHRRFLSIYGDHLTLLNVLNAFLPLDGAARRKEFCRDHFLNYRTLVSAESIRVQLSHILDLGAMVSWGLSNPLSASLAADIEHAGIEELVRRCLVAGFFRQTAKKSRESGTYIPMGLGSAASDSDELAVRRLDIHPSSSLRALRSRRNPPFVIYDEYVVTTKRYLRTVVSFESAWLSQHC-SYFR 735          
BLAST of Gvermi5742.t1 vs. uniprot
Match: A0A7R9Y5L7_9VIRI (RNA helicase n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y5L7_9VIRI)

HSP 1 Score: 415 bits (1067), Expect = 2.000e-132
Identity = 282/694 (40.63%), Postives = 395/694 (56.92%), Query Frame = 0
Query:   18 LPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILDN-----SPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVI------RETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFFRNGTDLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTSGHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTET-GELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLEDSSSEDL--VRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWV 697
            LPV   +  +++A+ A D L++V ETGSGKTT LPQ+ILD      +P+  V+V QPRRVAA +VA RVAAER   LG  VGYAVRF+ K+   VTR++YVTDG+L+RE L DG  A   RY+  ++DE HERSV+TD++LGV+      R               +  L G+       K+++MSAT DA+    F  +G D     + ++GR++ V +++   P  D ++ A+ A +QVH      G +LVFL GQE+I SA  LLK   R RL       + +LPLFAAQ    Q R  A +P+     HR++I AT IAETS+T+PGV YVVD+G+ K R      G+  + L V P+S+A A QR GRAGR  PG  FRLYT+  +++L+    PEILR    +  LQ+ A+   G K    +   F  +   PR A  RALE LYALGALD N +LT   GE MA +P  PM A+ +L S   GC    L+ A ++SV+ +IF+ P  K +QA AA R+  ++ GDHLTL+N   A+ + +   +  +C++ F++ R L  A ++ NQL         V +G       G   D E S   +L  +RRCL  G+F H AR        +P G+ K + S +  V +HPS      ++ + P  VVY ELV TTK+++R V +IE  W+
Sbjct:    5 LPVALAADALVAAVRATDKLVVVGETGSGKTTLLPQLILDRVLGGGAPSGGVVVAQPRRVAATSVARRVAAERGVPLGGEVGYAVRFDEKADARVTRLKYVTDGLLVREALLDGTLA---RYAVAVVDEAHERSVHTDVLLGVLVRAQRARRAAHDAAAARAAAGDARALDGV---PPPLKLLVMSATLDADAFLDFLGDGAD----AVYVAGRSHPVEVLYTRSPEPDVLEAALLAVVQVHLDERPGG-VLVFLTGQEEIESAESLLKE--RARLLPAAAGPLQVLPLFAAQTADLQERVFAPVPEG----HRRVILATTIAETSLTLPGVRYVVDTGLCKARAFNARTGV--DALVVTPVSKAAARQRAGRAGREAPGKCFRLYTERAFDQLKATAPPEILRCHLASIVLQLKAM---GIK----DVAGFEFMAAPPRSALLRALEQLYALGALDDNGELTRPLGEQMAALPLEPMAAKMVLRSGAHGCAREALALAGMMSVD-AIFVSPRAKHEQAAAARRKLGASQGDHLTLLNVFRAFREVSDKGEAAWCRERFVSRRALLKAFSVANQL---------VRYG------EGAGIDTESSCGNNLEPLRRCLAEGFFLHAARA-------MPDGSYKCLASGQV-VSVHPSSVLGGAQRARHPC-VVYSELVRTTKVWMRDVTAIEPRWL 647          
BLAST of Gvermi5742.t1 vs. uniprot
Match: A0A329SBV3_9STRA (ATP-dependent RNA helicase n=15 Tax=Phytophthora TaxID=4783 RepID=A0A329SBV3_9STRA)

HSP 1 Score: 411 bits (1057), Expect = 1.270e-130
Identity = 271/702 (38.60%), Postives = 397/702 (56.55%), Query Frame = 0
Query:   16 QSLPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILDNS-PNSSVLVTQPRRVAAITVATRVAAE-RASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFFRNGTDLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGY-STSGHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTETGELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLE---DSSSEDL--VRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWVPLHSGNYFKTKN 709
            Q LP+      I+ A+  N V+ILV ETGSGKTTQ+PQ I ++   ++ V +TQPRRVAAITVA RV  E +   LGD+VGY VRF++ +S+  TR++++TDG+L+RE L    S    RYS V++DE HER++ TDI+ G+++  +                    R +   KVV+MSAT D      FF    D     + I GR ++V++ +  +   DY+D A+ A LQ+H    +T+G ILVFL GQEDI +   LL+   R  L  D  + +++ P+FAA P  +Q++     P  +R    K+I ATNIAETSITI GV YVVD+G+ K R+ +  +G+  E+L+ + +S+AQA QR GRAGR  PG  +RL+ +E + +L +   P+I R       LQ+  +          + L F  ++K  + +  +ALE LYALGALD+  KLT  G  MA +P  PM A  LL++  LGC +  LS  A+LSVE SIF  P +K  +A  +  RFV+  GD +TL+N  + Y+Q    ++ ++C+DH++NHR +   +++R QL                   +G LE LE   DSS  D+  +R+ +VAG+F + A R   +G        K M      V +HPS S   F +   P  VVY+ELV+T+K Y+R+V  IE  W+   +  +F  KN
Sbjct:   50 QRLPIYAHRSKIIEAVNGNQVVILVGETGSGKTTQIPQYIWESDRAHARVAITQPRRVAAITVAQRVCEEAKRGPLGDAVGYCVRFDDTTSKN-TRLKFMTDGMLVREAL---LSPTLERYSVVVLDEAHERTLQTDILFGIVKRAM--------------------RKRTDLKVVVMSATLDVALFKRFFG---DFKPAIIQIPGRMFQVDVFYTAKTQPDYLDSALVAVLQIHLEEKTTNGSILVFLTGQEDIETLETLLEEYARS-LPADALK-LMVCPIFAAMPREQQMKVFEPAPAGVR----KVILATNIAETSITINGVRYVVDTGLVKQRSFVASSGM--EMLQTESVSKAQAWQRTGRAGREAPGICYRLFPEETFEQLPERAIPDIQRVSLEVVVLQLKTMGI-------DDVLGFDFIEKPLKTSLFKALEKLYALGALDNKGKLTTLGRQMAGLPVEPMYAVMLLKATELGCAEEALSVVAMLSVE-SIFYSPRDKKAEAAQSRARFVAFEGDQITLLNVFNGYIQCGAKQRNKWCRDHYINHRAMTRVESVRLQL-------------------KGYLEKLELPIDSSFPDIDPLRKSIVAGFFLNTAMRSVAEGLGGSKTAYKTMCGRSEIVKVHPSSSL--FMRNPPPKWVVYNELVFTSKHYIRSVLVIEKEWLVELAPTFFAKKN 687          
BLAST of Gvermi5742.t1 vs. uniprot
Match: A0A507BPF3_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BPF3_9FUNG)

HSP 1 Score: 412 bits (1058), Expect = 2.860e-130
Identity = 262/708 (37.01%), Postives = 398/708 (56.21%), Query Frame = 0
Query:    2 KRKRTAAVAVVEKD-QSLPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILDN--SPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFFRNGTDLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTSGHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTETGELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMV-SWGLTHPFSRGVLEDLEDSSSEDLVRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWVPLHSGNYF 705
            K+K+T  V+ ++   ++LPV Q  + ++  +AAN  LI++SETGSGKTTQ+PQ + ++  +    + +TQPRRVAAI+++ RVA E  + LG  VGY++RFE   S   T+I+Y+TDG+LLRE L+D    L ++YS +++DE HER++ TD++ G+++                     +   +   ++++MSAT DA+K+A +F +        + I GR Y V +    E   DY+D AV   LQ H  Y  +G ILVFL GQE+I S   +L    R          +++ P+FA  P  +Q +     P+     HRK++ +TNI ETSIT+ GV YV+D+G+AK R   P  G   EVLRV+PIS+A A+QR GRAGR  PG  FRLYT+  Y+ L +   PEILR + ++  L ++A           N L F  LD  PR A ER LETLYALGA+  + KLTE G+ MA  P  P  AR LL+S  + CV  ++S  ++LSV+ S+F  P +K ++A AA ++F S  GDH++L+N L AY      +  ++C D+F+N R +    +IR QL+       ++ S  +T P         +  +SE++++ C ++G+F + A    +      +G          GV +HPS        KK+   V Y+ELV T++ Y+R V  +  AW    + +Y+
Sbjct:   91 KKKQTVVVSSLQAQREALPVYQAKKQLMDVVAANKTLIVISETGSGKTTQIPQFLHESGLTKRGIIAITQPRRVAAISISKRVAEETNTTLGGLVGYSIRFEEVCSPQ-TKIKYMTDGMLLRELLSD---TLFKKYSAIVLDEAHERTLRTDVLFGMVKS--------------------IREVRKDLRIIVMSATLDAQKMADYFEDAV-----VVNIPGRQYPVEIFHTDEKQEDYLDAAVSTTLQTHAKYPPNGDILVFLTGQEEIESVTNILNEASREL--PPTALKLLVAPIFANLPTWQQSQVFEPTPEG----HRKVVLSTNICETSITLSGVKYVIDTGMAKSRGFNPKTGF--EVLRVEPISRASAKQRSGRAGRDSPGMCFRLYTKSDYSLLPETTPPEILRKNLSSVILLLMASG-------VSNLLEFKFLDAPPREALERGLETLYALGAIGDDGKLTELGKSMAEFPVDPPYARVLLKSKAMNCVPEIISIVSMLSVD-SVFFTPHDKREEATAARKKFTSFDGDHISLLNVLRAYDD--VKKNKQWCLDNFVNSRAMHQVTDIRTQLAQFCHRARLLPSKEITLP---------QTINSENILK-CFLSGFFMNAAVAHPDGSFKTLVGG--------RGVHVHPSS---VVFGKKVGG-VFYNELVHTSRQYMRNVSVVNPAWFAEAAPHYY 729          
BLAST of Gvermi5742.t1 vs. uniprot
Match: A0A1X2HVC9_SYNRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HVC9_SYNRA)

HSP 1 Score: 406 bits (1044), Expect = 5.000e-129
Identity = 275/704 (39.06%), Postives = 395/704 (56.11%), Query Frame = 0
Query:   16 QSLPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILD----NSPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFFRNGTDLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTSGHILVFLPGQEDIMSAIGLLK---AKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTETGELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAY--VQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLEDSSSEDLVRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWVPLHSGNYFKTKNL 710
            Q  P       I+ A+  N  +I++ ETGSGKTTQ+PQ +L+    N     + VTQPRRVAA+ +A RVA E  + LG  VGY VRF++ SS + T I+Y+TDG+LLRE L+D    L  RY  +++DE HER++ TD++ G+I+          EK +    +  L       K+VIMSAT DAEK + FF N      K L +SGR + V+  F  EP +DY+D A+    Q+H   S  G +L+FLPGQE I +   L+     +LR +  K     ++  PLFAA PPS+Q +     P    A  RK+I ATNIAETSITIPG+ YVVD G+AK+R   P  G+  E L + PIS++ A QR GRAGR   G  +RLYT++ + +LE    PEI R +  A    +++L   G     QN L F  +D+  R +  RALE LYALGALD   +L+E G  MA  P  P  A+ L++S   GC   +++  ++LSV+ +IF  P +K +QA  A R+F+ + GDHLTL+NAL AY  V+  P    E+C+++F+N R +  A  +R QL    +  D             +  ++  +   DLV +C + G+F++ A  +  DG Y  + N          + IHP  +      K++   ++Y+ELV+TTK Y+R V +I+ AW+P  +  YF  K L
Sbjct:   29 QFTPFFSGRDSIIEAIKTNPAVIVMGETGSGKTTQIPQFLLEAGFANKEIGGIAVTQPRRVAAVNLAKRVAEETVTRLGGKVGYTVRFDDTSS-SETVIKYLTDGMLLREILSDE---LLLRYKVIVLDEAHERTLRTDMLFGMIKNI---QRVRKEKADEGQNIQEL-------KIVIMSATLDAEKFSEFFNNA-----KILYVSGRLHPVDTFFTNEPQNDYLDAALVTIFQIHVN-SPPGDMLIFLPGQEAIETLTHLVTEYATQLRAKYLK-----LLACPLFAALPPSQQQKVFDPAP----AGTRKVILATNIAETSITIPGIKYVVDCGLAKLRGFNPKIGV--ESLLLHPISKSSAWQRTGRAGRERAGVCYRLYTEQTFRELEDDTVPEIRRCNLAAA---VLSLKASG----VQNVLDFEYMDRPSRPSLVRALEELYALGALDDRGELSELGRKMAEFPLDPPFAKVLIKSAEYGCSLEVIAIISLLSVD-TIFFTPSDKREQAAEARRKFIHSDGDHLTLLNALKAYWEVKGDP----EWCRENFINMRNVRIALEVREQLIRFCERLD-------------IKPNVSCAQDTDLVLKCFLTGFFQNTALLQP-DGTYKTVVN-------SQTIKIHPGSAMFG---KRVEG-ILYNELVFTTKHYVRNVSAIQSAWLPESAPKYFSNKGL 664          
BLAST of Gvermi5742.t1 vs. uniprot
Match: D0MZQ2_PHYIT (DEAD/DEAH box RNA helicase, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0MZQ2_PHYIT)

HSP 1 Score: 414 bits (1063), Expect = 5.300e-129
Identity = 273/704 (38.78%), Postives = 399/704 (56.68%), Query Frame = 0
Query:   16 QSLPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILDNS-PNSSVLVTQPRRVAAITVATRVAAE-RASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFFRNGTDLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTS-GHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRT--DATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTETGELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLE---DSSSEDL--VRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWVPLHSGNYFKTKN 709
            Q LP+      I+ A+  N V+ILV ETGSGKTTQ+PQ I ++   ++ V +TQPRRVAAITVA RV  E     LGDSVGY VRF++ +S+  TR++++TDG+L+RE L    S    RYS V++DE HER++ TDI+ G+++  +                    R +   KVV+MSAT D      FF+   D     + I GR ++V++ +  +   DY+D A+ A LQ+H    TS G ILVFL GQEDI +   LL+   R  L  D  + +++ P+FAA P  +Q++     P  +R    K+I ATNIAETSITI GV YVVD+G+ K R+ +  +G+  E+L+ + +S+AQA QR GRAGR  PG  +RL+ +E + +L +   P+I R   +    QL+I+ +          + L F  ++K  + +  +ALE LYALGALD+  KLT  G  MA +P  PM A  LL++  LGC +  LS  A+LSVE SIF  P +K  +A  +  RFV+  GD +TL+N  + Y+Q    ++ ++C+DH++NHR +   +++R QL                   +G LE LE   D+S  D+  +R+ +VAG+F + A R   +G        K M      V +HPS S   F +   P  VVY+ELV+T+K Y+R+V  IE  W+   +  +F  KN
Sbjct:  269 QRLPIYAHRSKIIEAVNDNQVVILVGETGSGKTTQIPQYIWESDRAHARVAITQPRRVAAITVAQRVCEEANRGPLGDSVGYCVRFDDTTSKN-TRLKFMTDGMLVREAL---LSPTLERYSVVVLDEAHERTLQTDILFGIVKRAM--------------------RKRKDLKVVVMSATLDVALFKRFFQ---DFKPAVIQIPGRMFQVDVFYTAKTQPDYLDSALVAVLQIHLEEKTSNGSILVFLTGQEDIETLETLLEEYARS-LPADALK-LMVCPIFAAMPREQQMKVFEPAPAGVR----KVILATNIAETSITINGVRYVVDTGLVKQRSFVASSGM--EMLQTESVSKAQAWQRTGRAGREAPGICYRLFPEETFEQLPERAIPDIQRVSLEVVVLQLKIMGI---------DDALAFDFIEKPLKTSLVKALEKLYALGALDNKGKLTTLGRQMAGLPVEPMYAVMLLKATELGCAEEALSVVAMLSVE-SIFYSPRDKKAEAAQSRARFVAYEGDQITLLNVFNGYIQCGSKQRNKWCRDHYINHRAMTRVESVRLQL-------------------KGYLEKLELPIDTSFPDIDPLRKSIVAGFFLNTAMRSVAEGLGGSKTAYKTMCGRSEIVKVHPSSSL--FMRNPPPKWVVYNELVFTSKHYIRSVLVIEKEWLVELAPTFFAKKN 906          
BLAST of Gvermi5742.t1 vs. uniprot
Match: A0A1Y2LLL4_EPING (Uncharacterized protein n=3 Tax=Didymellaceae TaxID=683158 RepID=A0A1Y2LLL4_EPING)

HSP 1 Score: 406 bits (1044), Expect = 6.870e-129
Identity = 267/708 (37.71%), Postives = 398/708 (56.21%), Query Frame = 0
Query:   18 LPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILDN---SPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFFRNGTDLSV---------KTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTSGHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTET-GELMARIPTTPMLARSLLESLR--LGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLEDSSSEDLVRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTT-KIYLRTVCSIEHAWVPLHSGNYFKTKN 709
            LP+ Q    +L  +  + V I+V ETGSGKTTQ+PQ +L+    +  + + VTQPRR+AA +VA RVA E  + LG  VGY++RFE+ +S   T++++VTDG+LLRE L D    L +RYS +++DE HERS+++D++L ++++                    +LR +   +VVI SAT +AE+   FF      SV         + +GI GRT+ V + +  EP ++Y+D AVEA + +H      G ILVFL G+E+I  AI +L  ++    S  Q+  ++ LPL+A  P  +Q+      P    A  RK+I +TNIAE S+TI G+ YVVDSG  K+R      G+  E L V P+S+A A QR GRAGRT PG  FRLYT+  +  LE+   PEI R++     LQ++ L          N +RF  L   P     RAL+ LY+LGALD N +LT+  G  MA +P  PMLA++LL +     GC+  MLS AA+++++G+ F+   +   Q + A RRF  + GDHLTL N   A+VQ      +++C+D+ LNH+++  A ++R QL+  L    +    L+ P    VL  +      + VRRCL  G+F H+AR +  DG +  +     + +       HPS  F  F +K     VVY E++ T  KIY+R + S++  W+  ++  Y+K KN
Sbjct:   22 LPIAQIKDQLLYTIEIHPVTIIVGETGSGKTTQIPQYLLNAGWCASGAQIAVTQPRRIAATSVAARVAEELGTPLGQRVGYSIRFEDVTS-AATQVKFVTDGLLLREMLVDP---LLKRYSVIMVDEAHERSLSSDVLLSLLKK--------------------VLRKREDLRVVISSATLEAERFLDFFNPDEGESVWGKNQEDYGRIVGIQGRTHPVEVQYLAEPTNNYIDRAVEAVMDIHKD-EADGDILVFLTGREEIDGAIDMLSDRIADLSSTQQK--LMPLPLYAGLPTEDQMFVFQKAP----ANTRKVILSTNIAEASVTIDGIVYVVDSGYVKLRAYDARLGI--ENLNVIPVSKASATQRSGRAGRTRPGKCFRLYTESAFKSLEEATFPEIQRSNLAPVLLQLLNLGI-------TNLVRFDYLSPPPSTLVTRALDLLYSLGALDTNARLTKPLGTRMAELPLEPMLAKALLNAASPDFGCLSEMLSIAAMMTLQGNAFVSHNDNKAQLEKARRRFTVSEGDHLTLYNVFTAFVQNG--MNVQWCRDNCLNHKSMVKAVSVRKQLAAYLDRFGVKESALSAP---DVLR-VGGRPLAERVRRCLTTGFFAHVARMKQSDGSFTTVDGKTTLWA-------HPSSVF--FHRKA--DWVVYTEILSTRDKIYIRDLSSVDMDWLTEYAPEYYKVKN 672          
BLAST of Gvermi5742.t1 vs. uniprot
Match: A0A7K7VGR2_EUDEL (RNA helicase (Fragment) n=8 Tax=Aves TaxID=8782 RepID=A0A7K7VGR2_EUDEL)

HSP 1 Score: 407 bits (1045), Expect = 7.280e-129
Identity = 257/700 (36.71%), Postives = 399/700 (57.00%), Query Frame = 0
Query:    7 AAVAVVEKDQSLPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILD---NSPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFFRNG--TDLSVKT---LGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTSGHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTET-GELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLEDSSSEDLVRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWV 697
            A++++ ++ Q LPV +    IL  + +   L++V ETG GK+TQ+PQ + +    +    V VTQPRRVAA++VA RVA ER +VLG  VGY +RF++ +    TRI+++TDG+L+RE ++D    L  +YS +++DE HER++ TDI +G++++                    + + +   ++++ SAT DAEK   FF      D S  T   L + GRT+ V++ +   PV DY+   VE A+++H      G IL+FL GQE++ + + +L  + R       R+ + +LP++A  P  EQ++    + +S+R    K+I ATNIAETSIT+ GV++V+D G  K+R   P   +  E L V P+SQA A QR GRAGR   G  +RLYT+E + KL +   PE+ R++     LQ+ AL          N LRFP L   P  +  +ALE LYALG LD + +LTE  G  +A  P  PM A+ LLES   GC + +L+ AA++ ++ +IF+ PPN+  QA   HR+F    GDHLT++N   A+V+ +  +  ++C++HFLN++ L  A  +R QL  +L     V + + +  S G           D + RC+V+G+F + A+  S  G Y  I +       +H + IHP+    T   +K P  VVY+E++ T+K Y+R V +IE AW+
Sbjct:   43 ASLSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPRATRIKFLTDGMLVREMMSDP---LLTKYSVLMLDEAHERTLYTDISIGLLKK--------------------IQKKRGDLRLIVASATLDAEKFRDFFNQNETNDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIQSTVETAMKIHQT-ENDGDILIFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPTVEQMKVFERVSRSVR----KVIVATNIAETSITVHGVAFVIDCGFVKLRAYNPKTAI--ECLVVVPVSQASANQRAGRAGRNRSGKCYRLYTEEDFEKLPQSTVPEMQRSNLAPVILQLKALGI-------DNVLRFPFLSPPPAQSMVQALELLYALGGLDTHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSEEILTIAAMMQIQ-NIFVIPPNQKSQAARRHRKFAVEEGDHLTMLNVYEAFVKHS--KSSQWCQEHFLNYKGLVRASVVREQLKKLL-----VRFKVPNTSSEG---------DPDTILRCIVSGFFANAAKLHST-GVYRTIRD-------DHELHIHPTSVLYT---EKPPRWVVYNEIIQTSKYYMRDVTAIESAWL 677          
BLAST of Gvermi5742.t1 vs. uniprot
Match: A0A7K6FLC5_9CORV (RNA helicase (Fragment) n=19 Tax=Neognathae TaxID=8825 RepID=A0A7K6FLC5_9CORV)

HSP 1 Score: 407 bits (1046), Expect = 7.680e-129
Identity = 262/701 (37.38%), Postives = 395/701 (56.35%), Query Frame = 0
Query:    7 AAVAVVEKDQSLPVIQKSQDILSALAANDVLILVSETGSGKTTQLPQIILD---NSPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFENKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTDIVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKIAHFF-RNGT-----DLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTGYSTSGHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQPPSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVRTLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKLEKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARERALETLYALGALDHNMKLTET-GELMARIPTTPMLARSLLESLRLGCVDSMLSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQRAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSRGVLEDLEDSSSEDLVRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLEHGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWV 697
            A++++ ++ Q LPV +    IL  +     L++V ETG GK+TQ+PQ + +    +    V VTQPRRVAA++VA RVA ER +VLG  VGY +RF++ +    TRI+++TDG+L+RE + D    L  RYS +++DE HER++ TDI +G++++                    + + +   ++++ SAT DAEK   FF +N T     D SV  L + GRT+ V++ +   PV DY+   VE  +++H      G IL FL GQE++ + + +L  + R       ++ + +LP++A  P  EQL+    +P S+R    K+I ATNIAETSIT+ G+++V+D G  K+R   P   +  E L V P+SQA A QR GRAGR+  G  +RLYT+E + KL K   PE+ R++     LQ+ AL          N LRFP L   P  +  +ALE LYALG LD + +LTE  G  +A  P  PM A+ LLES   GC   +L+ AA++ ++ +IF+ PPNK  QA   HR+F    GDHLT++N   A+V+ +  +  ++C+DHFLN++ L  A  +R QL  +L     V + +    S G           D V RC+V+G+F + A+  S  G Y  I +       +H + IHPS        +K P  VVY+E++ T K Y+R V +IE +W+
Sbjct:   43 ASLSIEQQRQKLPVFKLRNHILYLVENYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADP---LLTRYSVLMLDEAHERTLYTDIAIGLLKK--------------------IQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSV-ILTVEGRTFPVDIFYLQSPVPDYIKSTVETTMKIHQ-MENDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSPEQLKVFERVPHSVR----KVIVATNIAETSITVHGIAFVIDCGFVKLRAYNPRTAI--ECLLVVPVSQASAGQRAGRAGRSRSGRCYRLYTEEDFEKLPKSTVPEMQRSNLAPVILQLKALGI-------DNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQ-NIFVIPPNKKIQAARQHRKFAVEEGDHLTMLNVYEAFVKHS--KSSQWCQDHFLNYKGLVRASVVREQLKKLL-----VRFKVPKKSSEG---------DPDPVLRCIVSGFFANAAKFHST-GAYRTIRD-------DHELHIHPSS---VLYAEKPPRWVVYNEVIQTAKYYMRDVTAIESSWL 677          
The following BLAST results are available for this feature:
BLAST of Gvermi5742.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IV84_9FLOR0.000e+082.49Putative ATP-dependent RNA helicase DHX35 n=1 Tax=... [more]
R7QJF5_CHOCR5.810e-25754.89Similarity to pre-mRNA-splicing factor ATP-depende... [more]
A0A7R9Y5L7_9VIRI2.000e-13240.63RNA helicase n=1 Tax=Prasinoderma coloniale TaxID=... [more]
A0A329SBV3_9STRA1.270e-13038.60ATP-dependent RNA helicase n=15 Tax=Phytophthora T... [more]
A0A507BPF3_9FUNG2.860e-13037.01Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A1X2HVC9_SYNRA5.000e-12939.06P-loop containing nucleoside triphosphate hydrolas... [more]
D0MZQ2_PHYIT5.300e-12938.78DEAD/DEAH box RNA helicase, putative n=2 Tax=Phyto... [more]
A0A1Y2LLL4_EPING6.870e-12937.71Uncharacterized protein n=3 Tax=Didymellaceae TaxI... [more]
A0A7K7VGR2_EUDEL7.280e-12936.71RNA helicase (Fragment) n=8 Tax=Aves TaxID=8782 Re... [more]
A0A7K6FLC5_9CORV7.680e-12937.38RNA helicase (Fragment) n=19 Tax=Neognathae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 272..384
e-value: 3.3E-15
score: 66.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 252..384
e-value: 4.5E-10
score: 39.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 246..424
score: 14.273355
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 14..225
e-value: 3.7E-18
score: 76.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 28..213
score: 18.56953
IPR007502Helicase-associated domainSMARTSM00847ha2_5coord: 451..542
e-value: 9.0E-26
score: 101.6
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 452..541
e-value: 3.5E-17
score: 62.6
IPR011709Domain of unknown function DUF1605PFAMPF07717OB_NTP_bindcoord: 615..704
e-value: 1.1E-13
score: 51.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..220
e-value: 2.2E-64
score: 218.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 221..403
e-value: 2.1E-57
score: 195.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..585
NoneNo IPR availableGENE3D1.20.120.1080coord: 438..536
e-value: 4.6E-20
score: 73.5
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 13..698
NoneNo IPR availablePANTHERPTHR18934:SF118ATP-DEPENDENT RNA HELICASE DHX33coord: 13..698
NoneNo IPR availableCDDcd18791SF2_C_RHAcoord: 231..392
e-value: 1.12593E-58
score: 193.904
NoneNo IPR availableCDDcd17917DEXHc_RHA-likecoord: 34..204
e-value: 1.36673E-65
score: 211.939
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 135..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:1339942..1342092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5742.t1Gvermi5742.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 1339942..1342092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5742.t1 ID=Gvermi5742.t1|Name=Gvermi5742.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=717bp
MKRKRTAAVAVVEKDQSLPVIQKSQDILSALAANDVLILVSETGSGKTTQ
LPQIILDNSPNSSVLVTQPRRVAAITVATRVAAERASVLGDSVGYAVRFE
NKSSRTVTRIRYVTDGVLLRETLTDGFSALKRRYSHVIIDEVHERSVNTD
IVLGVIRETLAPPTTPTEKQNPSFGLAGLLRSKLAFKVVIMSATTDAEKI
AHFFRNGTDLSVKTLGISGRTYKVNMMFATEPVSDYVDGAVEAALQVHTG
YSTSGHILVFLPGQEDIMSAIGLLKAKLRHRLSKDQRRSVIILPLFAAQP
PSEQLRAIADLPQSMRATHRKIIFATNIAETSITIPGVSYVVDSGVAKVR
TLIPHNGLYTEVLRVQPISQAQAEQRKGRAGRTGPGYLFRLYTQEHYNKL
EKYPKPEILRTDATATQLQIIALTHFGRKRPEQNHLRFPLLDKIPRHARE
RALETLYALGALDHNMKLTETGELMARIPTTPMLARSLLESLRLGCVDSM
LSTAAILSVEGSIFLRPPNKMDQAKAAHRRFVSASGDHLTLVNALHAYVQ
RAPMRKLEFCKDHFLNHRTLASADNIRNQLSVILQHPDMVSWGLTHPFSR
GVLEDLEDSSSEDLVRRCLVAGYFRHIARRRSEDGKYVPIGNVKGMGSLE
HGVDIHPSCSFRTFKQKKIPALVVYDELVWTTKIYLRTVCSIEHAWVPLH
SGNYFKTKNLGVEDNP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR007502Helicase-assoc_dom
IPR011709DUF1605
IPR027417P-loop_NTPase
IPR002464DNA/RNA_helicase_DEAH_CS