Gvermi5739.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5739.t1
Unique Name	Gvermi5739.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	545

Homology

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BLAST of Gvermi5739.t1 vs. uniprot
Match: A0A2V3IRM1_9FLOR (T-complex protein 1 subunit alpha n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRM1_9FLOR)

HSP 1 Score: 991 bits (2562), Expect = 0.000e+0
Identity = 519/544 (95.40%), Postives = 536/544 (98.53%), Query Frame = 0

Query:    1 MSSLVIQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDDGSVPY 544
            MSSLVI+GQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKL RETLINAA+TSLSSKILGSAES+KFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMP RVAPAKIACLDVDLRR KMKMGVS+LIENPEEL+KAQEKELDITRDRI++VLKAGANVVLT+KGIDDAALKYFVEAGAIAVRRVSERD+ERIAKATGATVQV+MADL GEESFD+SLLGYADEVYEERIRDD+ILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVV GGGA EAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSK+KL SFGLDLD G+LRDNL+EGV+EPT+SKKKIIQFATEAALTIIRIDDLIKIDKKEDDGSVPY
Sbjct:    1 MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLGRETLINAARTSLSSKILGSAESVKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRTKMKMGVSVLIENPEELNKAQEKELDITRDRISAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDIERIAKATGATVQVSMADLGGEESFDNSLLGYADEVYEERIRDDDILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVVGGGAAEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKSKLSSFGLDLDVGALRDNLAEGVIEPTISKKKIIQFATEAALTIIRIDDLIKIDKKEDDGSVPY 544

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BLAST of Gvermi5739.t1 vs. uniprot
Match: R7QQU1_CHOCR (T-complex protein 1 subunit alpha n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQU1_CHOCR)

HSP 1 Score: 916 bits (2367), Expect = 0.000e+0
Identity = 476/544 (87.50%), Postives = 510/544 (93.75%), Query Frame = 0

Query:    1 MSSLVIQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDDGSVPY 544
            MS LVI GQRESGQDVRTGNVTACVAV+NIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRR NELVRSRIHPTNI+ GYR AMREGCKYL+D LA PVDKL +E L+NAAKTSLSSKILGSAES  FA MAVDAV+AVKTPT+ GKYKYPI+AIHVLKAQGKSA+ESELLPGYALN  RSSQLMP R+APA+IACLD+DLRRAKMKMGVSILIE+PEEL+KAQEKELDITRDRIN+VLKAGANV+LT+KGIDDAALKYFVEAGAIAVRRVSERD+ RIAKATGATV+V MADL GEE+FD SLLG A+E+YEERIRDDN+LI+K CKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESN VVAGGGAVEAALSIHLENFA M+GSREQLAIA+FAEALLVIPKTLA+NAA DSTDLVAKLKAVHHAAQNDDSKA   +FGLDL AG+LRDNL++GV+EP +SKKKIIQFATEAALTIIRIDDLI I K E+DGS PY
Sbjct:    1 MSGLVIDGQRESGQDVRTGNVTACVAVSNIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRGNELVRSRIHPTNIVAGYRWAMREGCKYLKDNLATPVDKLGKECLVNAAKTSLSSKILGSAESEMFANMAVDAVLAVKTPTTGGKYKYPIDAIHVLKAQGKSARESELLPGYALNKARSSQLMPQRIAPARIACLDIDLRRAKMKMGVSILIEDPEELNKAQEKELDITRDRINAVLKAGANVILTTKGIDDAALKYFVEAGAIAVRRVSERDINRIAKATGATVEVAMADLSGEETFDPSLLGSAEEIYEERIRDDNVLILKKCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNYVVAGGGAVEAALSIHLENFAKMLGSREQLAIAQFAEALLVIPKTLAINAAKDSTDLVAKLKAVHHAAQNDDSKANFSTFGLDLQAGTLRDNLAKGVIEPAMSKKKIIQFATEAALTIIRIDDLITIRKNENDGSSPY 544

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BLAST of Gvermi5739.t1 vs. uniprot
Match: A0A1X6NV05_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NV05_PORUM)

HSP 1 Score: 737 bits (1902), Expect = 7.620e-263
Identity = 381/543 (70.17%), Postives = 459/543 (84.53%), Query Frame = 0

Query:    1 MSSLVIQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGK----YKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDD 539
            MSSL I G RESGQDVRT NVTACVAVANI++SSLGP GLDKMLVDEVGDVTVTNDGATI+ LLEVEHPAA+VLTELA QQD+EVGDGTTSVVILAAELL+RAN+LV +RIHPTNII GYRLAMRE CKY+RDK+A PV+KL RE L+NAA+TSLSSKILGSAES  FA +AVDAV++VKT    GK      YPI+++HVLK QG+SA+ESELLPG A+N  R+++ MP+RVAPA++ACLDVDLRR KMKMG+ + I++   L+ AQEKELDITRDR+ ++L +GANV+LT+KGIDDAALKYFVEAGAIA+RRV   D++R+AKATGA VQ ++ADL G ES D S LG A+E  E RIRDD + +++ C+STAACSVLLRGPNEYMCDEM RSFHDA+CVVKRT+ES +VV GGGAVEAALS++L+NFATM+GSREQLAIA+FA++LL IPKTLA+NAA D+TDLVA+L+A H+ AQ ++ KA L   GLDL  G +R++   GVVEP +SK K IQFA EAA+TI+RIDD + + +K+ D
Sbjct:    1 MSSLAISGTRESGQDVRTANVTACVAVANILRSSLGPQGLDKMLVDEVGDVTVTNDGATIVGLLEVEHPAARVLTELAQQQDQEVGDGTTSVVILAAELLKRANDLVAARIHPTNIIAGYRLAMREACKYIRDKMATPVEKLGRELLVNAARTSLSSKILGSAESTHFANVAVDAVLSVKT--GGGKDGVPASYPIKSVHVLKCQGRSARESELLPGVAINSGRAAKGMPSRVAPARVACLDVDLRRTKMKMGIQVQIDDASALNAAQEKELDITRDRVKAILASGANVILTTKGIDDAALKYFVEAGAIALRRVPLADVKRVAKATGAVVQGSLADLSGAESLDASQLGTAEEAAERRIRDDTVTVLRGCRSTAACSVLLRGPNEYMCDEMGRSFHDAICVVKRTVESGTVVPGGGAVEAALSVYLDNFATMLGSREQLAIAQFADSLLAIPKTLAVNAALDATDLVARLRAAHYVAQTEEGKAGLAHTGLDLSRGVVRNSSRAGVVEPALSKIKSIQFAAEAAITILRIDDSVDVARKDAD 541

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BLAST of Gvermi5739.t1 vs. uniprot
Match: A0A1X6P646_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P646_PORUM)

HSP 1 Score: 725 bits (1871), Expect = 3.930e-258
Identity = 375/541 (69.32%), Postives = 451/541 (83.36%), Query Frame = 0

Query:    1 MSSLVIQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSG--KYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDD 539
            M+SL I G RESGQDVRT NVTACVAVANI++SSLGP GLDKMLVDEVGDVTVTNDGATI+ LLEVEHPAA++LTELA QQD+EVGDGTTSVVILAAELL+RAN+LV  +IHPTNII GYRLA+RE CKY+RD +A PV+ L RE L+NAA TSLSSKILGSAES  FA MAVDAV++VKT    G     YPI+A+HVLK QG+SA+ESELLPG ALN  R+++ MP+RV+PA++ACLDVDLRR KMKMGV + I++   L+ AQEKELDITRDR+ ++L +GANV+LT+KGIDDAALKYFVEAGAIA+RRV   D+ R+AKATGA VQ ++ADL G ES D S LG A+E  E RIRDD + +++ C+STAACSVLLRGPNEYMCDEM RSFHDAVCVVKRTLES +VV GGGAVEAALS+HL+ +AT +G+RE LA+A+ A+ALLVIPKTLA+NAA D+TDLVA+L+A H+ +QN+  K +L   GLDL  G +R++   GVVEP +SK K IQFA EAA+TI+RIDD I +++K+ D
Sbjct:    1 MTSLAISGHRESGQDVRTANVTACVAVANILRSSLGPQGLDKMLVDEVGDVTVTNDGATIVGLLEVEHPAARILTELAQQQDQEVGDGTTSVVILAAELLKRANDLVADKIHPTNIIAGYRLAIREACKYVRDHMATPVEALGRELLVNAAATSLSSKILGSAESNHFANMAVDAVLSVKTGGVKGGPPASYPIKAVHVLKCQGQSARESELLPGVALNCGRAAKGMPSRVSPARVACLDVDLRRTKMKMGVQVQIDDASALNAAQEKELDITRDRVQAILASGANVILTTKGIDDAALKYFVEAGAIALRRVPMEDVRRVAKATGAVVQGSLADLDGNESLDSSQLGAAEEAAEMRIRDDTVTVLRGCQSTAACSVLLRGPNEYMCDEMGRSFHDAVCVVKRTLESGTVVPGGGAVEAALSVHLDQYATTLGTREMLAVAQVADALLVIPKTLAVNAAMDATDLVARLRAAHYMSQNEKGKEELALTGLDLKTGVVRNSSKAGVVEPALSKIKSIQFAAEAAITILRIDDSINVERKDAD 541

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BLAST of Gvermi5739.t1 vs. uniprot
Match: M2Y3C0_GALSU (T-complex protein 1 subunit alpha n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y3C0_GALSU)

HSP 1 Score: 716 bits (1849), Expect = 8.360e-255
Identity = 366/544 (67.28%), Postives = 452/544 (83.09%), Query Frame = 0

Query:    1 MSSLVIQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDDGSVPY 544
            MSSL I G+R+SG+DVRT N+TAC+A+ANI++SSLGPVGLDKMLVD++GDV VTNDGATIL+ LEVEHPAAKVL ELA QQDEEVGDGTTSVV+LAAELL+RA++LVR  IHPTNII GYRLAMRE C++LRD  A  V+KL +  L+N A+T++SSKI+GS E   FA +AV+AV+AVK  T  GKYKYPI+AI++LK  GK A++S+LL G  LN+TR+SQ MP RV+PAKIACLD DLRR+KMKMGV +L+E+P+EL + QEKE ++T+ RI ++LKAGAN + T+KGIDDAALKYFVE  AIAVRRV++ D++R+AKATGA+VQ+TMADL GEESFD S LG A+EV EE I DD  + ++ CK+ A+ +++LRGPNEYMCDEMSRS HD +C V+R LESN VV GGG VEA+LSI LENFAT +G REQLAIAEF++ALLVIPKTLA NAA D+TD++AKL+AVH+AAQ D +K  L   GLDL+ G LRDNL  G++EP +SK K IQ ATEAA+TI+RIDDLIK+ KK++D S  Y
Sbjct:    1 MSSLAIYGERQSGEDVRTQNITACIAIANILRSSLGPVGLDKMLVDDMGDVIVTNDGATILKQLEVEHPAAKVLVELAQQQDEEVGDGTTSVVLLAAELLKRADDLVRRGIHPTNIIAGYRLAMRESCRFLRDTFAVSVEKLGKSCLLNTARTAISSKIIGS-EIDFFANLAVEAVLAVKRKTEVGKYKYPIKAINILKKSGKGARDSQLLKGIGLNVTRASQGMPLRVSPAKIACLDFDLRRSKMKMGVQVLVEDPKELERIQEKEYEVTKSRIEAILKAGANAIFTTKGIDDAALKYFVEKNAIAVRRVAKDDMKRLAKATGASVQLTMADLGGEESFDPSFLGSAEEVVEETISDDKFIFVRGCKNLASGTIVLRGPNEYMCDEMSRSLHDCLCAVQRALESNYVVPGGGCVEASLSIFLENFATTLGGREQLAIAEFSDALLVIPKTLAANAALDATDMIAKLRAVHNAAQLDSNKGNLSHMGLDLENGHLRDNLEAGILEPAMSKIKSIQLATEAAITILRIDDLIKLKKKQEDESGEY 543

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BLAST of Gvermi5739.t1 vs. uniprot
Match: A0A3B6SBA3_WHEAT (T-complex protein 1 subunit alpha n=92 Tax=Poaceae TaxID=4479 RepID=A0A3B6SBA3_WHEAT)

HSP 1 Score: 713 bits (1840), Expect = 2.100e-253
Identity = 363/532 (68.23%), Postives = 449/532 (84.40%), Query Frame = 0

Query:    6 IQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKE 537
            I G+R+SGQDVRT NV+AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATILR+LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RANELVR++IHPT+II+GYRLAMRE CKY+ +KL+  VDKL +++LIN AKTS+SSK++ + ++  FA + V+AV AVKT  S G+ KYPI++I++LKA GKSAKES LL GYALN  R++Q MPTRV PA+IACLD +L++ KM+MGV +L+ +P EL K +E+E DIT++RI  VLKAGANVV T+KGIDD +LKYFVEAGAIAVRRV + DL  +AKATGAT+  T AD+ GEE+FD S LG+ADEV EERI DD I+++K  K+T+A S++LRG N++M DE+ RS HDA+C+VKRTLESN+VVAGGGAVEAALS++LEN AT +GSREQLAIAEFAE+LL+IPK LA+NAA D+TDLVAKL++ HH AQ +  K  L S GLDL  G +R+NL  GV+EP +SK KIIQFATEAA+TI+RIDD+IK+DK+E
Sbjct:   10 IMGERQSGQDVRTQNVSACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRANELVRNKIHPTSIISGYRLAMREACKYVEEKLSVKVDKLGKDSLINCAKTSMSSKLITTDDNF-FANLVVEAVQAVKTTNSKGEVKYPIKSINILKAHGKSAKESYLLNGYALNTGRAAQGMPTRVTPARIACLDFNLQKTKMQMGVQVLVSDPRELEKIRERESDITKERIEKVLKAGANVVFTTKGIDDMSLKYFVEAGAIAVRRVRKEDLRHVAKATGATMVTTFADMEGEETFDPSFLGHADEVVEERISDDEIILVKGTKNTSAVSIILRGANDFMLDEIERSLHDALCIVKRTLESNTVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATDLVAKLRSYHHKAQTNADKQHLSSMGLDLTKGVIRNNLEHGVIEPAMSKVKIIQFATEAAITIVRIDDMIKLDKEE 540

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BLAST of Gvermi5739.t1 vs. uniprot
Match: A0A6I9R2Z1_ELAGV (T-complex protein 1 subunit alpha n=4 Tax=Magnoliopsida TaxID=3398 RepID=A0A6I9R2Z1_ELAGV)

HSP 1 Score: 702 bits (1812), Expect = 3.910e-249
Identity = 361/535 (67.48%), Postives = 447/535 (83.55%), Query Frame = 0

Query:    3 SLVIQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKE 537
            +L I G+R+SGQDVRT NV AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATIL++LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RAN+LVR++IHPT+II+GYRLAMRE CKY+ +KLA  V+KL +++LIN AKTS+SSK++GS +S  FA + VDAV AVKT  + G+ KYPI+ I++LKA GKSAK+S LL GYALN  R++Q MPTRVAPA+IACLD +L++ KM+MG+ +L+ +P EL K +++E DIT++RI  + KAGANVVLT+KGIDD +LKYFVEAGAIAVRRV + DL  +AKATGATV  T AD+ GEE+FD S LGYADEV EERI DD+++++K  K+T+A S++LRG N++M DEM RS HDA+ +VKRTLESN VVAGGGAVEAALS++LE  AT +GSREQLAIAEFAE+LL+IPK LA+NAA D+T+LVAKL+A HH AQ    K  L S GLDL  G++R+NL  GV+EP +SK KIIQFATEAA+TI+RIDD+IK+ K E
Sbjct:    7 TLDILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKVEKLGKDSLINCAKTSMSSKLIGS-DSDFFANLVVDAVQAVKTTNARGEVKYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPTRVAPARIACLDFNLQKTKMQMGIQVLVTDPRELEKIRQREADITKERIEKIRKAGANVVLTTKGIDDMSLKYFVEAGAIAVRRVRKEDLRHVAKATGATVVSTFADMEGEETFDSSFLGYADEVVEERIADDDVILVKGTKNTSAVSLILRGANDFMLDEMDRSLHDALSIVKRTLESNMVVAGGGAVEAALSVYLEYLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKQHLSSMGLDLSKGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDE 540

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BLAST of Gvermi5739.t1 vs. uniprot
Match: A0A0K9PUT7_ZOSMR (T-complex protein 1 subunit alpha n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PUT7_ZOSMR)

HSP 1 Score: 699 bits (1804), Expect = 5.970e-248
Identity = 358/535 (66.92%), Postives = 448/535 (83.74%), Query Frame = 0

Query:    6 IQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDDG 540
            I G+R+SGQDVRT NV AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATIL++LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RAN LVR++IHPT+II+G+RL+M+E CKY+ DKLA  V+KL +  LIN AKTS+SSK++ S +S  FA +AVDAV ++KT  + G+ KYPI+ I+++KA GKSA++S LL GYALN++R++Q MP +V+PAKIACLD +L++ KM+MGV +L+ +P EL K +++E DIT++RI  +LKAGANV+LT+KGIDD ALKYFVEAGAIAVRRV + DL  +AKATGAT   T AD+ GEE+FD S LGYADEV EERI DD I+++K  K+T+A S++LRG N+YM DEM R+ HDA+C+VKRTLESN+VVAGGGAVEAALS++LE+ AT +GSREQLAIAEFAE+LL+IPK LA+NAA D+T+LVA+L+A HHAAQ  + K  L S GLDL  G +RDNL  GV+EP +SK KIIQFATEAA+TI+RIDD+IK+  KED G
Sbjct:   10 ILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANGLVRNKIHPTSIISGFRLSMKEACKYVDDKLAIKVEKLGKAPLINCAKTSMSSKLI-SGDSDFFANLAVDAVQSIKTTNTKGEVKYPIKGINIIKAHGKSARDSYLLKGYALNISRAAQGMPLKVSPAKIACLDFNLQKTKMQMGVQVLVTDPRELEKIRQREADITKERIEKILKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDLRHVAKATGATSVSTFADMEGEETFDSSFLGYADEVVEERISDDEIILVKGTKNTSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVEAALSVYLEHLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAQLRACHHAAQMKEDKRHLSSMGLDLSKGIIRDNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKL-AKEDQG 542

[Close]

BLAST of Gvermi5739.t1 vs. uniprot
Match: A0A835S053_VANPL (T-complex protein 1 subunit alpha n=3 Tax=Petrosaviidae TaxID=1437197 RepID=A0A835S053_VANPL)

HSP 1 Score: 699 bits (1804), Expect = 6.190e-248
Identity = 360/535 (67.29%), Postives = 447/535 (83.55%), Query Frame = 0

Query:    6 IQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDDG 540
            I G+R+SGQDVRT NV AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATIL++LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RAN+LVR++IHPT+II+GYRLAMRE CKY+ +KLA  V+KL +E+LIN AKTS+SSK++G  +S  FA + VDAV AVKT  + G+ KYPI+ I++LKA GKSA++S LL GYALN  R++Q MP+RVAPA+IACLD +L++ K++MGV +L+ +P EL K +++E DIT++RI  +LKAGANVVLT+KGIDD +LKYFVEAGAIAVRRV + DL  IAKATGATV  T AD+ GEE+FD S LG ADE  EERI DD+++++K  K+++A SV+LRG N++M DEM RS HDA+ +VKRTLESN VVAGGGAVEAALS++LEN AT +GSREQLAIAEFAE+LL+IPK L++NAA D+T+LVAKL+A HHAAQ    K  L S GLDL  GS+R+NL  GV+EP++SK KIIQFATEAA+TI+RIDD+IK+ K E + 
Sbjct:   10 ILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVDEKLAVKVEKLGKESLINCAKTSMSSKLIG-VDSDFFANLVVDAVQAVKTTNARGEVKYPIKGINILKAHGKSARDSYLLNGYALNTGRAAQGMPSRVAPARIACLDFNLQKTKLQMGVQVLVSDPRELEKIRQRESDITKERIEKLLKAGANVVLTTKGIDDMSLKYFVEAGAIAVRRVRKEDLRHIAKATGATVVTTFADMEGEETFDSSFLGQADEAVEERIADDDVIMVKGTKTSSAVSVILRGANDFMLDEMERSLHDALSIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHAAQTKADKQHLSSMGLDLSKGSIRNNLEAGVIEPSMSKVKIIQFATEAAITILRIDDMIKLIKDEQEA 543

[Close]

BLAST of Gvermi5739.t1 vs. uniprot
Match: A0A2I0AWY3_9ASPA (T-complex protein 1 subunit alpha n=20 Tax=Mesangiospermae TaxID=1437183 RepID=A0A2I0AWY3_9ASPA)

HSP 1 Score: 697 bits (1799), Expect = 3.690e-247
Identity = 357/535 (66.73%), Postives = 448/535 (83.74%), Query Frame = 0

Query:    6 IQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGVSILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADEVYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLSEGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDDG 540
            I G+R+SGQDVRT NV AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATIL++LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RAN+LVR++IHPT+II+GYRLAMRE CKY+ +KLA  V+KL +++LIN AKTS+SSK++G+ +S  FA + VDAV AVKT  + G+ KYPI+ I+VLKA GKSAK+S LL GYALNM R++Q MP++VAPA+IACLD +L++ K++ GV +L+ +P EL K +++E DIT++RI  +LKAGANVVLT+KG+DD ALKYFVE+GAIAVRRV + DL  IAKA+GATV  T AD+ GEE+FD S LG+ADEV EERI DD+++++K  K+++A S++LRG N++M DEM RS HD + +VKRTLESN VVAGGGAVEAALS++LEN AT +GSREQLAIAEFAE+LL+IPK LA+NAA D+T+LVAKL+A HHAAQ    K  L S GLDL  G++R+NL  GV+EP +SK KIIQFATEAA+TI+RIDD+IK+ K E + 
Sbjct:   10 ILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVDEKLAVKVEKLGKDSLINCAKTSMSSKLIGT-DSDFFANLVVDAVQAVKTTNARGEVKYPIKGINVLKAHGKSAKDSYLLNGYALNMGRAAQGMPSKVAPARIACLDFNLQKTKLQFGVQVLVSDPRELEKIRQRESDITKERIEKLLKAGANVVLTTKGVDDMALKYFVESGAIAVRRVRKEDLRHIAKASGATVVTTFADMEGEETFDASFLGHADEVVEERIADDDVILVKGTKTSSAVSLILRGANDFMLDEMDRSLHDGLSIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKQHLSSMGLDLSKGNIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDEQEN 543

The following BLAST results are available for this feature:

BLAST of Gvermi5739.t1 vs. uniprot

BLAST of Gvermi5739.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IRM1_9FLOR	0.000e+0	95.40	T-complex protein 1 subunit alpha n=1 Tax=Gracilar...	[more]
R7QQU1_CHOCR	0.000e+0	87.50	T-complex protein 1 subunit alpha n=1 Tax=Chondrus...	[more]
A0A1X6NV05_PORUM	7.620e-263	70.17	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
A0A1X6P646_PORUM	3.930e-258	69.32	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
M2Y3C0_GALSU	8.360e-255	67.28	T-complex protein 1 subunit alpha n=1 Tax=Galdieri...	[more]
A0A3B6SBA3_WHEAT	2.100e-253	68.23	T-complex protein 1 subunit alpha n=92 Tax=Poaceae...	[more]
A0A6I9R2Z1_ELAGV	3.910e-249	67.48	T-complex protein 1 subunit alpha n=4 Tax=Magnolio...	[more]
A0A0K9PUT7_ZOSMR	5.970e-248	66.92	T-complex protein 1 subunit alpha n=1 Tax=Zostera ...	[more]
A0A835S053_VANPL	6.190e-248	67.29	T-complex protein 1 subunit alpha n=3 Tax=Petrosav...	[more]
A0A2I0AWY3_9ASPA	3.690e-247	66.73	T-complex protein 1 subunit alpha n=20 Tax=Mesangi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 408..420 score: 45.13 coord: 81..100 score: 50.67 coord: 51..69 score: 44.18 coord: 374..396 score: 27.18 coord: 29..45 score: 44.47
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 3..538
IPR012715	T-complex protein 1, alpha subunit	TIGRFAM	TIGR02340	TIGR02340	coord: 5..538 e-value: 3.7E-247 score: 819.2
IPR012715	T-complex protein 1, alpha subunit	CDD	cd03335	TCP1_alpha	coord: 8..535 e-value: 0.0 score: 875.843
IPR002423	Chaperonin Cpn60/GroEL/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 27..532 e-value: 2.2E-152 score: 508.2
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 212..370 e-value: 6.5E-171 score: 571.5
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 207..379
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 24..532 e-value: 6.5E-171 score: 571.5
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 9..532
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 137..406 e-value: 6.5E-171 score: 571.5
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 139..405
None	No IPR available	PANTHER	PTHR11353:SF84	T-COMPLEX PROTEIN 1 SUBUNIT ALPHA	coord: 3..538
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 53..69
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 32..44
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 81..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_776	contig	ScGOVlb_776:1334529..1336163 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5739.t1	Gvermi5739.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_776 1334529..1336163 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5739.t1 ID=Gvermi5739.t1|Name=Gvermi5739.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=545bp
MSSLVIQGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGD
VTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELL
RRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINA
AKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKA
QGKSAKESELLPGYALNMTRSSQLMPTRVAPAKIACLDVDLRRAKMKMGV
SILIENPEELSKAQEKELDITRDRINSVLKAGANVVLTSKGIDDAALKYF
VEAGAIAVRRVSERDLERIAKATGATVQVTMADLVGEESFDHSLLGYADE
VYEERIRDDNILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVK
RTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPK
TLAMNAAHDSTDLVAKLKAVHHAAQNDDSKAKLCSFGLDLDAGSLRDNLS
EGVVEPTVSKKKIIQFATEAALTIIRIDDLIKIDKKEDDGSVPY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR012715	Chap_CCT_alpha
IPR002423	Cpn60/GroEL/TCP-1
IPR027409	GroEL-like_apical_dom_sf
IPR027413	GROEL-like_equatorial_sf
IPR027410	TCP-1-like_intermed_sf
IPR002194	Chaperonin_TCP-1_CS