Gvermi5709.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5709.t1
Unique Name	Gvermi5709.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	655

Homology

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BLAST of Gvermi5709.t1 vs. uniprot
Match: A0A2V3IX91_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX91_9FLOR)

HSP 1 Score: 347 bits (889), Expect = 1.120e-102
Identity = 242/570 (42.46%), Postives = 335/570 (58.77%), Query Frame = 0

Query:   91 SHIVNQESSKMNMNGNPLQAAFRMGEAASLAMSQALQVQSQALPNASGTGVSTSPAFVMPNSQISMDMPDQELTYLSCMDGKTHPGILPQSSVPV-GVSAAVSNLGNPHNPGGLSKKTSPNSRGQSRSLKNDKGLMKHSGTLAHKASDEVSMSERLQRTNQLIRDGTVPNENTEALSEMK-TETNPTLKVGSIVKGSDSKNCTPTQVADSIDSKDASRAHLVHEASKIKSGAALPHSASVQSALAAGGGLGIKNKTGNDVETEARSTKSEKNPSMNRASTPSQKSTASGGSAAVERRASQGSSAPKRARNRTKARSSGGGKRSRADRGQIARSNSSRSNAAAQTPRSMITDIKNATSVNTKMKAAGRNTQAERSNPMIHVNQVMRALEDPSHGSDKRRQGKHDGNPKARAVVPRQTQTAVENPKVSF-ETAGEKNIEMEGHDSQRGRQSSNTLAASSQAQLFEMLQPSTGGTRSIDNTGLDTVDGMSQFALVTGSHNGKVAGGNNTPYPYDLQPFLPTGVEEEPMLGNIGS---MLNNMQDAVDLGSTDFEDDSLLGPADPGDLIGRNRS 654
            +H+ N +S+KM  +   L+ A RM +  SLAMSQALQ QSQ +PNAS   VS  P F MP +Q+ +DM  Q   Y+  MDGK    ILPQ++VPV GV+A++ N+  P+   G + ++   +R  SR++KND  L      +  K  D++ +S+R+ R    +R+  +  +N +   ++K  ET+   K G+  + +++KN    Q   SID+KD SR+       K K G +L  S S+ + + +    G+KNK G + E E RSTKS++N                    AVERR SQ S  P+R R+R K RS GG +RSRA  GQ AR+NSSRS +AAQTPR  + ++K+AT++  +MKA+GRNTQ + S PM+H N VM  L D S G +K R  K+D N  AR    RQ   A E  K+ F  +AG+ N E    ++Q+G QS   L+A+ +AQLF M                   +G++ F++V   HNGKV G     YPY+L  FL TGVEEE MLGNIG+   MLNNMQ+ VDLGST+FE+DS+LG AD GDLIGRNR+
Sbjct:  575 AHVSNPQSAKMTADSASLRQALRMDDP-SLAMSQALQAQSQGIPNASNARVSAPPGFRMPANQLPLDMTGQGFVYVPQMDGKDFSSILPQNAVPVAGVNASMQNMRVPNATSGPNNQSHATTRAPSRTMKNDSNLSNPGRNVNDKPQDDLPISDRMSRGAARLREEALQKDNGDQSVKLKQAETSAKAKSGANSQSANAKNAQQNQAVQSIDNKDTSRSXXXXXXXKGKGGVSLSRSGSMPATMTSMANPGMKNKGGENGEGENRSTKSDRNTPTXXXXXXXXXXXXXXXXXAVERRPSQ-SGTPRRNRSRNKGRSPGGSRRSRAG-GQSARNNSSRSTSAAQTPRVAVNEVKSATALAAQMKASGRNTQGDLSAPMMHANAVMSGLPDGS-GPEKARHAKNDANTAAR-TAGRQAAKAGEEAKLGFGSSAGDNNNEQAAQNAQQGGQSPGPLSATGEAQLFGM-------------------EGIAAFSIVGSGHNGKVNGSTGANYPYELSNFLGTGVEEETMLGNIGNIGTMLNNMQENVDLGSTEFEEDSILGVADAGDLIGRNRT 1120

The following BLAST results are available for this feature:

BLAST of Gvermi5709.t1 vs. uniprot

BLAST of Gvermi5709.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IX91_9FLOR	1.120e-102	42.46	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 628..654
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 417..465
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..496
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..395
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 52..654
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 26..51
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..25
None	No IPR available	TMHMM	TMhelix		coord: 27..49

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_776	contig	ScGOVlb_776:1160499..1165395 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5709.t1	Gvermi5709.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_776 1160499..1165395 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5709.t1 ID=Gvermi5709.t1|Name=Gvermi5709.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=655bp
MQRLAEKTSDDVSDVRIVEGLSKEQWLAGVGGLALLVCALAVNCALPSFV
LDYLAKRGYSNAVEGMRLDQHRKREQLIPLTVLDTPYPFLSHIVNQESSK
MNMNGNPLQAAFRMGEAASLAMSQALQVQSQALPNASGTGVSTSPAFVMP
NSQISMDMPDQELTYLSCMDGKTHPGILPQSSVPVGVSAAVSNLGNPHNP
GGLSKKTSPNSRGQSRSLKNDKGLMKHSGTLAHKASDEVSMSERLQRTNQ
LIRDGTVPNENTEALSEMKTETNPTLKVGSIVKGSDSKNCTPTQVADSID
SKDASRAHLVHEASKIKSGAALPHSASVQSALAAGGGLGIKNKTGNDVET
EARSTKSEKNPSMNRASTPSQKSTASGGSAAVERRASQGSSAPKRARNRT
KARSSGGGKRSRADRGQIARSNSSRSNAAAQTPRSMITDIKNATSVNTKM
KAAGRNTQAERSNPMIHVNQVMRALEDPSHGSDKRRQGKHDGNPKARAVV
PRQTQTAVENPKVSFETAGEKNIEMEGHDSQRGRQSSNTLAASSQAQLFE
MLQPSTGGTRSIDNTGLDTVDGMSQFALVTGSHNGKVAGGNNTPYPYDLQ
PFLPTGVEEEPMLGNIGSMLNNMQDAVDLGSTDFEDDSLLGPADPGDLIG
RNRS*