Gvermi5667.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5667.t1
Unique NameGvermi5667.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length235
Homology
BLAST of Gvermi5667.t1 vs. uniprot
Match: A0A2V3IX37_9FLOR (Heme-binding-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX37_9FLOR)

HSP 1 Score: 254 bits (649), Expect = 3.820e-82
Identity = 145/241 (60.17%), Postives = 168/241 (69.71%), Query Frame = 0
Query:    1 MGAVIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPES---LAMTAPVIVPAXXXXXXXXXXXXXXXXST---------SDDKAADCMMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGYNPPFTLPWLRRNEVHVPVDPQPYADIHPE 229
            MGAV+GR+AEETP H VV  ADGYQVWRYP ++VAVVRA  LD ++PPRGD F N+AFR LARYIGVFG P+N                  L+MTAPVI+ +  XXXXXXXXXXXXXX             D  ADCMMFVLP+HI  V DAPRP N A+ IE LP GRCEAVLS++G F   R +E A +LL +L+RD V+V G W+AQGYNPPFTLPWLRRNE+HVPVD  PY  +  E
Sbjct:    1 MGAVVGRIAEETPNHSVVARADGYQVWRYPGTIVAVVRAHKLDDQNPPRGDQFNNQAFRALARYIGVFGPPQNNAQAGXXXXXXXXXXXXXLSMTAPVILRSPQXXXXXXXXXXXXXXXXXXXXXXXVRQHDHDADCMMFVLPSHINTVHDAPRPNNSAISIEQLPPGRCEAVLSFSGIFDMTRASEHAHKLLQLLERDGVTVTGDWNAQGYNPPFTLPWLRRNEIHVPVDSAPYQRVEGE 241          
BLAST of Gvermi5667.t1 vs. uniprot
Match: A0A6J0JCA9_RAPSA (heme-binding-like protein At3g10130, chloroplastic n=13 Tax=Brassiceae TaxID=981071 RepID=A0A6J0JCA9_RAPSA)

HSP 1 Score: 127 bits (319), Expect = 1.500e-32
Identity = 89/219 (40.64%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    1 MGAVIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXSTSDDKAADCMMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGYNPPFTLPWLRRNEVHVPVD 219
            MG V G+++ ETP + VV+  D Y++  YP +V A +        DP    D  +  F  LA+YIGVFG PEN+          +PE +AMTAPVI    XXXXXXXXXXXXX     ++K    M F+LP    + EDAPRPT+E V I+    GR   V++++G       +EK  +L + L+RD   + G +    YNPP+T+P  + NEV +PV+
Sbjct:   34 MGMVFGKISVETPKYTVVKSGDSYEIREYPPTVAAEITY------DPSEFKDNRDGGFTVLAKYIGVFGKPENQ----------KPEKIAMTAPVITKEGXXXXXXXXXXXXXGGGGGEEKKTVTMQFLLPEMYKKAEDAPRPTDERVVIKE-EGGRKYGVVTFSGNAAESVVSEKVKKLRSDLERDGFKITGEFVLARYNPPWTIPPFKTNEVMIPVE 235          
BLAST of Gvermi5667.t1 vs. uniprot
Match: A0A0L0G533_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G533_9EUKA)

HSP 1 Score: 126 bits (317), Expect = 2.760e-32
Identity = 83/231 (35.93%), Postives = 117/231 (50.65%), Query Frame = 0
Query:    1 MGAVIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXST----------SDDKAADCMMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGP---WSAQGYNPPFTLPWLRRNEVHVPV 218
            MG V+G+V  ETP +  V E   Y V RYP +V A V            G+D    AFR LA+YIGVFGTPEN+    +  ++   E +AMTAPVI  A                +            + +  + M F+LPA    +++APRP NE+V++  +P+ RC AVL+Y+     +   EK   LL     D ++ +     W+   YNPPFTLPW++ NEVH+ V
Sbjct:    1 MGIVLGKVDVETPKYTTVYEGKDYAVRRYPPAVAAEVSYKL--------GED---NAFRVLAKYIGVFGTPENKSTTVESGES---EPIAMTAPVITTADVNPERHLHDGFCKPEAXXXXXXXXXXPKNHEEKESMAFLLPAKYT-LQNAPRPNNESVRLRAVPS-RCVAVLTYSYNTTMDEAREKKDRLLPTFTADGITALEKGQKWTLARYNPPFTLPWMKTNEVHIEV 215          
BLAST of Gvermi5667.t1 vs. uniprot
Match: A0A0D3B5I3_BRAOL (Uncharacterized protein n=3 Tax=Brassica TaxID=3705 RepID=A0A0D3B5I3_BRAOL)

HSP 1 Score: 123 bits (309), Expect = 1.330e-31
Identity = 79/216 (36.57%), Postives = 113/216 (52.31%), Query Frame = 0
Query:    4 VIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXSTSDDKAADCMMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGYNPPFTLPWLRRNEVHVPVD 219
            V G++A ETP H VV+  DGY++  YP +V A V   + DP +  +GD   +  F  LA+YIGVFG PEN+          +PE +AMTAPV+                      D+K    M F+LP    + EDAP PT+E V I+    GR   V++++G       +EK  +L + L+RD   + G +    YNPP+TLP  + NEV +PV+
Sbjct:    5 VFGKIAVETPKHTVVKSGDGYEIREYPPAVAAEV---TYDPSEF-KGDK--DGGFMVLAKYIGVFGKPENQ----------KPEKIAMTAPVVT---------------KEGGGGDEKKTVTMQFLLPEVYKKAEDAPLPTDERVVIKE-EGGRKYGVVTFSGTAAEGAVSEKVKKLSSDLERDGFKITGDYVLARYNPPWTLPPFKTNEVMIPVE 188          
BLAST of Gvermi5667.t1 vs. uniprot
Match: A0A3B6GX01_WHEAT (Uncharacterized protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A3B6GX01_WHEAT)

HSP 1 Score: 122 bits (305), Expect = 1.370e-30
Identity = 92/233 (39.48%), Postives = 133/233 (57.08%), Query Frame = 0
Query:    4 VIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXSTS----------------DDKAADC-MMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGYNPPFTLPWLRRNEVHVPVD 219
            ++G++  ETP H V+   DGY++ +YP  V A V   + DP++  +GD   +  F+ LA YIG FG P+N           +PE++AMTAPVI  +      XXXXXXXXXXS+                 +++A    M F+LP+  A+ E+APRPT+E V +  +   R  AV++++G  G +  AEKA  L A L++D  +V GP+    YNPP+TLP LR NEV  PV+
Sbjct:    9 MLGKIIVETPKHEVLHTGDGYEIRKYPPCVAAEV---TYDPKEM-KGD--RDGGFQVLANYIGAFGKPQN----------TKPEAIAMTAPVITSSGGGEAEXXXXXXXXXXSSEPXXXXXXXXXXXXEGREEQAGKVTMQFLLPSKYAKAEEAPRPTDERVVLREV-GERKYAVVTFSGLAGDKVVAEKAEGLKAALQKDGHAVTGPFVLSRYNPPWTLPPLRTNEVMFPVE 224          
BLAST of Gvermi5667.t1 vs. uniprot
Match: A0A7S3A0M1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0M1_9RHOD)

HSP 1 Score: 122 bits (306), Expect = 2.640e-30
Identity = 92/244 (37.70%), Postives = 127/244 (52.05%), Query Frame = 0
Query:    1 MGAVIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPEN---------RPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXSTSD----------------DKAADCMMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSV-VGPWSAQGYNPPFTLPWLRRNEVHVPV 218
            MG V G++  ETP H V+++ +G ++ RYP+ V A V A++L      +G  F   AF  LARYIGVF TPEN          P   + +  A+ E +AMT PVI+ A     XXXXXXXXXX +                   +  A  M F+LPA    +E AP P +  VQ+  +P  R EAV+ ++G    E +  K  EL   L+   +      W+  GYNPPF LP+++ NEVH+PV
Sbjct:   25 MGIVFGKIDVETPKHEVLKKENGIEIRRYPSQVAATVSASNLGD---VKGKKFEGIAFGILARYIGVFSTPENVGKSGVDMTAPVLMEPSQDAKGEKIAMTGPVIMEAAERQSXXXXXXXXXXMTDKTXXXXXXXXXXXXXXXXESKARTMSFLLPAKYT-IETAPVPKDSRVQLSEMPE-RVEAVIVFSGNLSTESSRAKMEELKEKLEEMHIQADASKWTMAGYNPPFCLPFMKTNEVHIPV 263          
BLAST of Gvermi5667.t1 vs. uniprot
Match: A0A3B6FTC8_WHEAT (Uncharacterized protein n=6 Tax=Triticeae TaxID=147389 RepID=A0A3B6FTC8_WHEAT)

HSP 1 Score: 121 bits (303), Expect = 2.710e-30
Identity = 92/232 (39.66%), Postives = 131/232 (56.47%), Query Frame = 0
Query:    4 VIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXSTS----------------DDKAADC-MMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGYNPPFTLPWLRRNEVHVPV 218
            ++G++  ETP H V+   DGY++ +YP  V A V   + DP++  +GD   +  F+ LA YIG FG P+N           +PE++AMTAPVI  +      XXXXXXXXXXS+                 ++KA+   M F+LP+   + E+APRPT+E V +  +   R  AV+++ G  G +  AEKA  L A L++D  +V GP+    YNPP+TLP LR NEV  PV
Sbjct:    9 MLGKIIVETPKHEVLHTGDGYEIRKYPPCVAAEV---TYDPKEM-KGD--RDGGFQVLANYIGAFGKPQN----------TKPEAIAMTAPVITSSGGGEAEXXXXXXXXXXSSEPXXXXXXXXXXXXEGREEKASKVTMQFLLPSKYTKAEEAPRPTDERVVLREV-GERKYAVVTFGGLAGDKVVAEKAEGLKAALEKDGHAVTGPFVLSRYNPPWTLPPLRTNEVMFPV 223          
BLAST of Gvermi5667.t1 vs. uniprot
Match: K3XLR4_SETIT (Uncharacterized protein n=11 Tax=Panicoideae TaxID=147369 RepID=K3XLR4_SETIT)

HSP 1 Score: 119 bits (299), Expect = 9.860e-30
Identity = 93/238 (39.08%), Postives = 122/238 (51.26%), Query Frame = 0
Query:    1 MGAVIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXSTS----------------DDKAAD---CMMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGYNPPFTLPWLRRNEVHVPVD 219
            MG V+G++  ETP H V+    GY++ RYP  V A     + DP++  +GD   +  F  LA YIG  G P+N           +PE +AMTAPVI           XXXXXXXX                   DD+ A     M F+LP+  A+ EDAPRPT+E V I  +P  R   V  ++G    +   EKA  L A L++D  +V GP+    YNPPFTLP LR NEV +PV+
Sbjct:    1 MGMVLGKITVETPKHEVLHTGAGYEIRRYPPCVAAEF---TYDPKEW-KGDP--DGGFTVLANYIGALGKPQN----------TKPEKIAMTAPVITSGAGDGEASSXXXXXXXXXXXXGGEPEPXXXXXXXXXDDQQAPGKVTMQFLLPSKYAKAEDAPRPTDERVVIREVPE-RKYGVARFSGVAAEKTVREKAEGLRAALEKDGYTVKGPFVLARYNPPFTLPPLRTNEVMIPVE 221          
BLAST of Gvermi5667.t1 vs. uniprot
Match: A0A2Z7D077_9LAMI (SOUL heme-binding family protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7D077_9LAMI)

HSP 1 Score: 118 bits (296), Expect = 1.640e-29
Identity = 89/219 (40.64%), Postives = 123/219 (56.16%), Query Frame = 0
Query:    1 MGAVIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXSTSDDKAADCMMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGYNPPFTLPWLRRNEVHVPVD 219
            MG ++G+++ ETP + V+     Y++ +Y ++VVA V        DP + +   +  F  LA YIG  G P+N           +PE +AMTAPVI  A   XXXXXXXXXXXXX          M F+LP+  A+ EDAPRP +E V +      +  AV+ ++G  G +  AEKA +L A L+RD   V G +    YNPP+TLP LR NEV +PV+
Sbjct:    1 MGMMLGKISVETPKYQVIHSTKDYEIRKYGSAVVAEVTY------DPDQFNSNKDGGFMILANYIGALGNPQN----------TKPEKIAMTAPVITKAGPSXXXXXXXXXXXXXXXXXXXXXX-MQFILPSKYAKAEDAPRPVDERVVVRE-EGEKKYAVVRFSGLTGEKAVAEKAEKLKAWLERDGFKVAGDFVLARYNPPWTLPPLRTNEVMIPVE 201          
BLAST of Gvermi5667.t1 vs. uniprot
Match: UPI0008FD0782 (heme-binding-like protein At3g10130, chloroplastic n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD0782)

HSP 1 Score: 118 bits (295), Expect = 2.080e-29
Identity = 95/219 (43.38%), Postives = 117/219 (53.42%), Query Frame = 0
Query:    1 MGAVIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRGDDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAXXXXXXXXXXXXXXXXSTSDDKAADCMMFVLPAHIARVEDAPRPTNEAVQIETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGYNPPFTLPWLRRNEVHVPVD 219
            MG V G++  ETP + VV+  DGY+V  YP +VVA     + DP +     D     F  LA YIG  G P N           +PE +AMTAPVI    XXXXXXXXXXXXXX   +       M FVLPA     E+APRPT E V I+    GR   V+ ++G        EKA +L   L+R+ V V G      YNPP+TLPW R NEV +PV+
Sbjct:    1 MGMVFGKIGVETPEYKVVKSGDGYEVREYPPAVVAEF---TYDPSEFKGNKD---GGFTVLANYIGALGKPHNE----------KPEKIAMTAPVITKEGXXXXXXXXXXXXXXGGKTVT-----MQFVLPAKYKTAEEAPRPTEERVVIKA-EGGRRYGVVRFSGVATEAVVKEKAEKLRTDLEREGVKVTGDLVLARYNPPWTLPWCRTNEVMIPVE 197          
The following BLAST results are available for this feature:
BLAST of Gvermi5667.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX37_9FLOR3.820e-8260.17Heme-binding-like protein n=1 Tax=Gracilariopsis c... [more]
A0A6J0JCA9_RAPSA1.500e-3240.64heme-binding-like protein At3g10130, chloroplastic... [more]
A0A0L0G533_9EUKA2.760e-3235.93Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A0D3B5I3_BRAOL1.330e-3136.57Uncharacterized protein n=3 Tax=Brassica TaxID=370... [more]
A0A3B6GX01_WHEAT1.370e-3039.48Uncharacterized protein n=3 Tax=Triticinae TaxID=1... [more]
A0A7S3A0M1_9RHOD2.640e-3037.70Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A3B6FTC8_WHEAT2.710e-3039.66Uncharacterized protein n=6 Tax=Triticeae TaxID=14... [more]
K3XLR4_SETIT9.860e-3039.08Uncharacterized protein n=11 Tax=Panicoideae TaxID... [more]
A0A2Z7D077_9LAMI1.640e-2940.64SOUL heme-binding family protein n=1 Tax=Dorcocera... [more]
UPI0008FD07822.080e-2943.38heme-binding-like protein At3g10130, chloroplastic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011256Regulatory factor, effector binding domain superfamilyGENE3D3.20.80.10Regulatory factor, effector binding domaincoord: 10..99
e-value: 3.2E-10
score: 41.9
coord: 100..226
e-value: 7.4E-28
score: 99.4
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 5..218
IPR006917SOUL haem-binding proteinPFAMPF04832SOULcoord: 11..217
e-value: 4.6E-31
score: 108.2
IPR006917SOUL haem-binding proteinPANTHERPTHR11220HEME-BINDING PROTEIN-RELATEDcoord: 86..219
IPR006917SOUL haem-binding proteinPANTHERPTHR11220HEME-BINDING PROTEIN-RELATEDcoord: 2..110
NoneNo IPR availablePANTHERPTHR11220:SF62BNAA04G21740D PROTEINcoord: 86..219
NoneNo IPR availablePANTHERPTHR11220:SF62BNAA04G21740D PROTEINcoord: 2..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:943622..944326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5667.t1Gvermi5667.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 943622..944326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5667.t1 ID=Gvermi5667.t1|Name=Gvermi5667.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=235bp
MGAVIGRVAEETPAHVVVREADGYQVWRYPASVVAVVRAASLDPRDPPRG
DDFTNRAFRTLARYIGVFGTPENRPAHADDNDAAQPESLAMTAPVIVPAP
QKLSMTAPVIMPSSQSTSDDKAADCMMFVLPAHIARVEDAPRPTNEAVQI
ETLPAGRCEAVLSYNGFFGYERNAEKATELLAMLKRDSVSVVGPWSAQGY
NPPFTLPWLRRNEVHVPVDPQPYADIHPETNRPN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011256Reg_factor_effector_dom_sf
IPR006917SOUL_haem-bd