Gvermi5644.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5644.t1
Unique NameGvermi5644.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length235
Homology
BLAST of Gvermi5644.t1 vs. uniprot
Match: A0A2V3IPT0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPT0_9FLOR)

HSP 1 Score: 238 bits (606), Expect = 5.800e-76
Identity = 127/234 (54.27%), Postives = 162/234 (69.23%), Query Frame = 0
Query:    1 MNTSEPAIQLRLQALNCPIPQTQTDTLLIQKHICWLEDVYIRRYRIPERRPLRKTDYHSALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPFDPWQNRRLPVVPNVSSSPVVSEAIDSLRAALDLPHGEDVNVAHAAAAAADAVEVVTRDALPFDTAHDIDSMPIALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVGR 234
            M+ S+ AI LRL AL CPIP++ T            EDV+IRRY I +R PLR+ DY S LNAYLRLL+AP  A+ASP   RNFL++LAI L + D+A ++NTPFDPWQ+R LPVV  VS+S  V+ A++ LR  L L   + V+ A  AAAAADA+EV+T + +P      I+ M I  +T D Q+R V C MRLL+VRRLR+LQD +N  IS MQ+ITA+P TD+KLGKVGR
Sbjct:    1 MDCSDEAIDLRLSALKCPIPESPT------------EDVHIRRYPIEQREPLRRKDYRSGLNAYLRLLNAPPNAYASPKQTRNFLIELAINLQYRDNATRYNTPFDPWQSRCLPVVRGVSNSEQVARALEELRQVLQLTKVDGVSNASVAAAAADAIEVLTTEQVPLPPESVIEKMAIGFDTQDAQLRNVVCAMRLLFVRRLRSLQDNVNTLISGMQAITANPHTDSKLGKVGR 222          
BLAST of Gvermi5644.t1 vs. uniprot
Match: R7VLV1_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VLV1_CAPTE)

HSP 1 Score: 105 bits (261), Expect = 6.720e-24
Identity = 80/239 (33.47%), Postives = 125/239 (52.30%), Query Frame = 0
Query:   11 RLQALNCPIPQ--TQTDTLLIQKHICWLEDVYIRRYRIPERRPLRKT---DYHSALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPFDPWQNRRLPVVPN--VSSSPVVSEA-IDSLRAALDLPHGED-------VNVAHAAAAAADAVEVVTRDALPFDTAHDIDSMPIALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVGR 234
            +L AL+ P P     TD    +K + WLED  IR Y+I +R  LR     +++ AL  YL  +  P  AH +     ++LL  A++L + D+  K+ T  +  ++      P   +  +   S+A I SL A L+LP   D       +++      + DA+  V ++ +P      I+ + +  ETSD   +  A V+RLLY+R LR LQ+  N  + A+Q++TADP+TD KLGKVGR
Sbjct:    5 KLTALDHPDPNGLNATDEEQFRKLMVWLEDQKIRHYKIEDRTALRNVCAGNWNDALKKYLEDISCPLRAH-NRNELVDWLLGYAVRLEYGDNTDKYRTASNNVKSHTKSGNPLDLIDFNDADSKAGILSLAAILELPPHPDHIVQLKAISILVREKLSKDAIASVQKNGIPKPNTIPIEKLSLGFETSDYISQEAAKVLRLLYIRELRDLQNSANEAVVAVQTLTADPKTDTKLGKVGR 242          
BLAST of Gvermi5644.t1 vs. uniprot
Match: A0A5J4XVR1_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XVR1_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 2.870e-17
Identity = 79/262 (30.15%), Postives = 121/262 (46.18%), Query Frame = 0
Query:   10 LRLQALNCPIPQTQT--DTLLIQKHICWLEDVYIRRYRIPERRPL---RKTDYHSALNAYLRLLDAPAAAHASPISA-RNFLLDLAIKLHFSDHAAKFNTPFDPWQNRRLPVVPNVSSS---------PVVSEAI----------------DSLRAALD------LPHGEDVNVAHAAAAAADAVEVVTRDALPFDTAHDIDSMPIALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVGR 234
            L L+AL  P P      D +     I WLE+  +R+Y I +R+ L   R   +      Y++ +  P A  AS  +A  ++LL  AI L + D A KFNT     Q+R  P + +             P  SEAI                +SL+AA +      LP  ED  ++ AA  AA  +  +           D+D  P+   T D++    A ++R+LY++ LR LQ  I+  +  +Q+ TA+P+TDA LG++GR
Sbjct:    6 LLLKALKYPKPSKNLVEDDVNFASLIVWLENTKVRQYSIEDRKALSDTRNPSWDGVFRKYVKDVQCPIALEASSKAAVLDWLLSYAISLEYQDQADKFNTAALS-QSRHKPALSSSQQEQHVYTDIDDPQTSEAIQHLLKQLQLVDTNAPMESLQAARNMVSDQLLPALEDSQLSSAAREAATQLSHL-----------DVDKFPLGFTTGDKKTDVAATILRMLYIKDLRGLQTIIDETLVNVQNYTANPKTDAALGRIGR 255          
BLAST of Gvermi5644.t1 vs. uniprot
Match: T1ERB6_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1ERB6_HELRO)

HSP 1 Score: 86.7 bits (213), Expect = 4.490e-17
Identity = 64/211 (30.33%), Postives = 103/211 (48.82%), Query Frame = 0
Query:   33 ICWLEDVYIRRYRIPERRPLRKT---DYHSALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPFDPWQNRRLPVVPNVSSSPVVSEAIDSLRAALDLP-HGEDVNVAHAAAA------AADAVEVVTRDALPFDTAHDIDSMPIALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVG 233
            +CWLED  I  Y+  +R  LRK    D+ +    YL  L  P  +    I   N+LL LAI+L + +   K    +    +   P+     +S      + SL   L++P H + + +  A         + DA+E + +  +    +  +D + +  ET D   +    ++RLLY++ LR LQD  N  I A Q+ITA+P+TD++LGKVG
Sbjct:   15 VCWLEDKRINHYQPDDRAGLRKICAGDWENHFLKYLNDLGCPVDSKEK-ILVINWLLSLAIRLEYGNKINKMKVTYGSGSSSCNPLENMDFTSEEFRAGVTSLGKMLNMPPHNDSLTLLRAICLLVKEKLSKDALERLKKQGIKQAASISLDKIDLGFETPDLITKEAGKILRLLYLKELRELQDCANEAIVAAQAITANPKTDSRLGKVG 224          
BLAST of Gvermi5644.t1 vs. uniprot
Match: A0A6P8ZZE7_THRPL (RNA transcription, translation and transport factor protein isoform X1 n=3 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZZE7_THRPL)

HSP 1 Score: 86.3 bits (212), Expect = 1.150e-16
Identity = 74/247 (29.96%), Postives = 116/247 (46.96%), Query Frame = 0
Query:    8 IQLRLQALNCPIPQTQTDTLLIQKHICWLEDVYIRRYRIPERRPLRKT--DYHSALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPFDPWQNRRLPVVPNVSSSPVVS----EAIDSLRAALDL-------PHGEDVNVAHAAAAAADAVEVVTRDALPFDTAHDIDSMP-------IALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVGR 234
            I     +L C +  + +D   I+  + WLE+  IRRY+I ER PL+     + +  + Y R L +P    A       +L+  AI L ++D+A K+        ++ +  VP V SS  +     E+ D  +  + L       PH + +    A +      E + +DAL   +   +   P       +  +  D  +   A ++RLLY+  LR LQ  IN  I A+QSITADP+TD KLG+VGR
Sbjct:   16 ISFHCSSLRCYVTSSTSDEREIKNLVLWLENQKIRRYKIEERGPLQAEGEQWRANFDKYCRDLASPIVDGAMA-EKLEWLIGYAISLEYADNAEKYRGQTAQNISQTIVNVPKVESSNPLDNLDFESSDFKKGVIALAQILNITPHPDHLVTLKAVSKVVR--ERLNQDALDNPSNIIVKGKPFPFQEADLGFDMGDYVLNEAAKILRLLYIHDLRNLQTHINETIVAVQSITADPKTDTKLGQVGR 259          
BLAST of Gvermi5644.t1 vs. uniprot
Match: A0A8B7PMG3_HYAAZ (UPF0568 protein C14orf166 homolog isoform X1 n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7PMG3_HYAAZ)

HSP 1 Score: 82.0 bits (201), Expect = 3.550e-15
Identity = 78/252 (30.95%), Postives = 120/252 (47.62%), Query Frame = 0
Query:   11 RLQALNCPIPQ--TQTDTLLIQKHICWLEDVYIRRYRIPERRPLRKTDYHSALNAYLRLLD------APAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPFDPW---QNRRLPVVPNVS-------SSPVVSEAIDSLRAALDLPHGEDVNVAHAAAAAADAVEVVTR---DAL--PFDTAHDIDSMPI-----ALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVGR 234
            +L+AL  P P      D   I++ + WLED  IR Y+I +R  L++T      N + + L+       P A H    S  ++LL LA++L + ++  K++         Q    P V N +       S P   + ++ L   L++    D    H     A +  V TR   +AL  P +  H   + PI       E  D+++     V+RLLY++ LR LQ  IN  I A Q+ITA+P+TD++LGKVGR
Sbjct:    5 KLKALLHPDPDHFNIKDDQSIRQLVVWLEDHKIRHYKIEDRTALKQTKDEKWPNVFKKYLNDLKCPHPPQALH----SVTDWLLGLAVQLEYGENVEKYSAQKAAHVASQRSAAPQVVNTNPLDALDFSCPEFRDGVNKLAEILNIQAHPD----HLVTLKAVSHLVKTRLSQEALASPGEVIHQGKAYPIFDADLGFEMGDKRLNDAGKVLRLLYIQDLRKLQTSINECIVATQTITANPKTDSRLGKVGR 248          
BLAST of Gvermi5644.t1 vs. uniprot
Match: A0A7D9E4V7_PARCT (UPF0568 C14orf166 homolog n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9E4V7_PARCT)

HSP 1 Score: 81.6 bits (200), Expect = 5.010e-15
Identity = 69/221 (31.22%), Postives = 106/221 (47.96%), Query Frame = 0
Query:   33 ICWLEDVYIRRYRIPERRPLRKT---DYHSALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPFDPWQNRRL---------PVVPNVSSS-PVVSEAIDSLRAALDLPHGEDVNVA-HAAAAAAD---AVEVVTRDALPFDTAHDI---DSMPIALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVG 233
            + WLED+ IR Y I +R  LR T   D+      Y++ LD P           ++LL  A++L +SD A++ N  ++  + ++            + N+ +  P +   I SL   L +P  ED  +  HA  A  +     EV    +    +  D+    +M +  +T D  V   A ++RLL+V  LR LQ  I   I A+QS TA+P+TD KLGKVG
Sbjct:   29 VVWLEDIKIRLYPINDRTALRDTENKDWPDVFKQYMKDLDCPVNPERKE-QVLDWLLGYAVRLEYSDKASQINKTWEEQKAKKQLEQNATEAEETIRNLKADDPNLKAGIMSLANLLKIPEHEDPLLRLHALKALIENKLTAEVQANASSQKKSEIDLKFFQNMKLGFDTGDSAVNEAAKILRLLHVSELRELQTSITQAIVAVQSHTANPKTDTKLGKVG 248          
BLAST of Gvermi5644.t1 vs. uniprot
Match: A0A0L7KUX5_9NEOP (Uncharacterized protein n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7KUX5_9NEOP)

HSP 1 Score: 80.9 bits (198), Expect = 6.430e-15
Identity = 75/233 (32.19%), Postives = 119/233 (51.07%), Query Frame = 0
Query:    9 QLRLQALNCPIPQTQT--DTLLIQKHICWLEDVYIRRYRIPERRPLRKTD---YHSALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPFDPWQNRRLPVVPNVSSSPVVSEAIDSLRAALDLPHGEDVNVAHAAAAAADAVEVVTRDALP--FDTAHDIDSMPIALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVGR 234
            Q++LQ+L  P P++    D    +  + WLED  IR Y+I ER  LR  D   +  + NAY R L +PAA   SP    N+LL  A++L ++D+  K+       +  +    PNV S+      +D+L  +          V+  A  +      +   AL     TA   D  P + E+    +++ + V++LL++  LR LQ +IN  + A+Q++TADP+TD KLG+VGR
Sbjct:    6 QIKLQSLGHPNPESFNCEDEKEYKSVVLWLEDQKIRHYKIEEREGLRNFDSDGWKESYNAYQRDLVSPAA-ELSPNEQLNWLLSYAVRLEYADNVDKYKNA----KVEQPKQAPNVIST----NPLDNLDFSCTTFKAGVERVSTIAGISPHPDPKIRLAALCKILKTAPHPD--PPSSESV--AIQQPSDVLKLLFIEDLRDLQTKINESLVAVQTVTADPRTDTKLGQVGR 225          
BLAST of Gvermi5644.t1 vs. uniprot
Match: UPI001F04C078 (RNA transcription, translation and transport factor protein-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04C078)

HSP 1 Score: 81.3 bits (199), Expect = 7.070e-15
Identity = 69/230 (30.00%), Postives = 107/230 (46.52%), Query Frame = 0
Query:   33 ICWLEDVYIRRYRIPERRPLRKTDYHS---ALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPFDPWQNRRLPVVPNVSSS--------------PVVSEAIDSLRAALDLPHGEDVNVAHAAAAAADAVEVVTRDALPFDTAHD------------IDSMPIALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVG 233
            I WLED+ IR Y+I ER  LR TD+     A   Y+  L+ P  +        ++LL  AI+L ++D A++ N   + W +++       ++S              P +   I SL + L +P  +D+ +   A  A     ++     P   A+             + +M +  +T D  V   A ++RLL+V  LR LQ  I   I A+QS TA+P+TD KLGKVG
Sbjct:   29 IVWLEDIKIRLYKIEERTLLRATDHKDWPLAFKQYIADLECPVNSERKE-QVLDWLLGHAIRLEYADKASQIN---EMWMDQKARKQHQKNNSVETEDSIWNIQVDDPNLKAGILSLASMLKIPEHDDLLLKLQAIRA-----IIENKMTPESQANATSQKKSDLNAKFLQNMSLGFDTGDSAVNEAAKILRLLHVSELRELQTSITQAIVAVQSHTANPKTDTKLGKVG 249          
BLAST of Gvermi5644.t1 vs. uniprot
Match: UPI000A2A936E (RNA transcription, translation and transport factor protein n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A936E)

HSP 1 Score: 80.9 bits (198), Expect = 9.800e-15
Identity = 70/223 (31.39%), Postives = 107/223 (47.98%), Query Frame = 0
Query:   33 ICWLEDVYIRRYRIPERRPLRKT---DYHSALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAKFNTPF---DPWQNRRLPVVPNVSS----SPVVSEAIDSLRAALDLPHGEDVNVAHAAAAAA--------DAVEVVTRDALPFDTAHDIDSM---PIALETSDRQVRRVACVMRLLYVRRLRALQDEINGFISAMQSITADPQTDAKLGKVGR 234
            + WLED  IR Y+I +R  LR     ++  AL  YL  L+ P  +     S  ++LL  AI+L ++D+A  +N+P     P  + +  V   + +    +P +   + SL   L+LP   D  V   A  A            E   +         DI S+    +  +T D  V   A ++RLL++  LR LQ +IN  I  +QSITA+P+TD +LG+VGR
Sbjct:   29 VVWLEDQKIRLYKIEDREALRDVKNENWSKALTKYLADLECPLKSKQKS-SVLDWLLAHAIRLEYADNAQTYNSPAKESQPLASDKXDVSEELLNLTVDNPDLKAGVSSLARLLNLPEHHDHYVLLQAIQALVESRLSKEGIQESQQKXXXXXXEPSDIISLRTSDLGFDTGDSAVNEAAKILRLLHISELRDLQTKINEAIVRVQSITANPKTDQRLGQVGR 250          
The following BLAST results are available for this feature:
BLAST of Gvermi5644.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPT0_9FLOR5.800e-7654.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7VLV1_CAPTE6.720e-2433.47Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
A0A5J4XVR1_9CHLO2.870e-1730.15Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
T1ERB6_HELRO4.490e-1730.33Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
A0A6P8ZZE7_THRPL1.150e-1629.96RNA transcription, translation and transport facto... [more]
A0A8B7PMG3_HYAAZ3.550e-1530.95UPF0568 protein C14orf166 homolog isoform X1 n=2 T... [more]
A0A7D9E4V7_PARCT5.010e-1531.22UPF0568 C14orf166 homolog n=1 Tax=Paramuricea clav... [more]
A0A0L7KUX5_9NEOP6.430e-1532.19Uncharacterized protein n=1 Tax=Operophtera brumat... [more]
UPI001F04C0787.070e-1530.00RNA transcription, translation and transport facto... [more]
UPI000A2A936E9.800e-1531.39RNA transcription, translation and transport facto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019265RNA transcription, translation and transport factor proteinPFAMPF10036RLLcoord: 9..234
e-value: 1.7E-38
score: 133.0
IPR019265RNA transcription, translation and transport factor proteinPANTHERPTHR15924CLEcoord: 10..234
NoneNo IPR availablePANTHERPTHR15924:SF9RNA TRANSCRIPTION, TRANSLATION AND TRANSPORT FACTOR PROTEINcoord: 10..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:845429..846207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5644.t1Gvermi5644.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 845429..846207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5644.t1 ID=Gvermi5644.t1|Name=Gvermi5644.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=235bp
MNTSEPAIQLRLQALNCPIPQTQTDTLLIQKHICWLEDVYIRRYRIPERR
PLRKTDYHSALNAYLRLLDAPAAAHASPISARNFLLDLAIKLHFSDHAAK
FNTPFDPWQNRRLPVVPNVSSSPVVSEAIDSLRAALDLPHGEDVNVAHAA
AAAADAVEVVTRDALPFDTAHDIDSMPIALETSDRQVRRVACVMRLLYVR
RLRALQDEINGFISAMQSITADPQTDAKLGKVGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019265RTRAF