Gvermi5640.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5640.t1
Unique NameGvermi5640.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length145
Homology
BLAST of Gvermi5640.t1 vs. uniprot
Match: A0A2V3IPT5_9FLOR (60S ribosomal protein L26-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPT5_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 9.940e-90
Identity = 137/144 (95.14%), Postives = 141/144 (97.92%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKGEGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 144
            MKRS AVSSSRRKSRKAHFTAPSSVRRIIMSAPLSS+LRQKYNVRSLPIRKHDEVRVVRG YKGEGKVLTCYRKK+V+HIERITR+KANQM VPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD
Sbjct:    1 MKRSAAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSELRQKYNVRSLPIRKHDEVRVVRGHYKGEGKVLTCYRKKYVVHIERITREKANQMPVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 144          
BLAST of Gvermi5640.t1 vs. uniprot
Match: Q7XY99_GRIJA (Ribosome protein L26 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY99_GRIJA)

HSP 1 Score: 244 bits (624), Expect = 2.420e-81
Identity = 123/144 (85.42%), Postives = 137/144 (95.14%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKGEGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 144
            MKR+ AV+SSRRK+RKAHFTAPSSVRRIIMS+PLS +LRQKY VRSLPIRKHDEVRVVRGQYKGEGKV+TCYRKK+V+HIERITR++ANQM VPVGIHPSNCVITKI+MDKDRK+ILDRKNRE KQ+KGKFSE+DV V MADVD
Sbjct:    1 MKRNKAVTSSRRKNRKAHFTAPSSVRRIIMSSPLSPELRQKYKVRSLPIRKHDEVRVVRGQYKGEGKVITCYRKKYVVHIERITRERANQMPVPVGIHPSNCVITKIRMDKDRKSILDRKNRETKQDKGKFSEADVGVAMADVD 144          
BLAST of Gvermi5640.t1 vs. uniprot
Match: R7QKP4_CHOCR (Ribosomal protein L26 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKP4_CHOCR)

HSP 1 Score: 239 bits (609), Expect = 4.670e-79
Identity = 121/144 (84.03%), Postives = 136/144 (94.44%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKGEGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 144
            MK+S AVSSSRRKSRKAHFTAPSSVRRIIMSA LSS+LRQK+NVRSLP+RK DEV++VRG +KG+GKVLTCYRKK+V+H+ER T++KANQM VPVGIHPSN VITKIKMDKDRKAILDRKNREAKQ+KGKFSE +VNVPMADVD
Sbjct:    1 MKQSSAVSSSRRKSRKAHFTAPSSVRRIIMSAALSSELRQKHNVRSLPLRKGDEVKIVRGNFKGDGKVLTCYRKKYVVHVERCTKEKANQMPVPVGIHPSNMVITKIKMDKDRKAILDRKNREAKQDKGKFSEGEVNVPMADVD 144          
BLAST of Gvermi5640.t1 vs. uniprot
Match: A0A7S1XEL1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEL1_9RHOD)

HSP 1 Score: 192 bits (488), Expect = 1.350e-60
Identity = 106/147 (72.11%), Postives = 124/147 (84.35%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKNREA--KQEKGKFSESDVNVPMADVD 144
            MKRS  VSSSRRKSRKAHFTAPS VRR +MSAPLSS+LRQK+NVRS+P+RK DEV++VRG +KG EGKV TCYRKKFVIHIER+TR+K +   VPVGIHPSN VITK+K+DKDRKA+L+RKNR A  K  KGK++ S+V    ADVD
Sbjct:    1 MKRSADVSSSRRKSRKAHFTAPSHVRRKLMSAPLSSELRQKHNVRSIPVRKDDEVQIVRGTFKGREGKVSTCYRKKFVIHIERLTREKVSGATVPVGIHPSNVVITKLKLDKDRKALLERKNRSAADKGGKGKYTVSEVTA-NADVD 146          
BLAST of Gvermi5640.t1 vs. uniprot
Match: A0A7S0HHD8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHD8_9EUKA)

HSP 1 Score: 192 bits (488), Expect = 2.500e-60
Identity = 106/147 (72.11%), Postives = 123/147 (83.67%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQE--KGKFSESDVNVPMADVD 144
            MK S +VSSSRRKSRK HFTAPS +RRIIMS+ LSS+LR KY+VRS+P+RK DEV VVRG YKG EGKV+ CYRKK+VIH+ERITR+KA+   V VGIHPS CVITK+K+DKDRK+ILDRKNR+ K +  KGKFSE D  V MADVD
Sbjct:   21 MKYSTSVSSSRRKSRKDHFTAPSHMRRIIMSSALSSELRNKYHVRSMPVRKDDEVSVVRGTYKGREGKVIQCYRKKWVIHVERITREKASGATVQVGIHPSKCVITKLKLDKDRKSILDRKNRDTKSDAAKGKFSEKD--VAMADVD 165          
BLAST of Gvermi5640.t1 vs. uniprot
Match: A0A7S1TM20_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TM20_9RHOD)

HSP 1 Score: 189 bits (481), Expect = 1.730e-59
Identity = 104/149 (69.80%), Postives = 119/149 (79.87%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVP----MADVD 144
            MK S +VSSSRRKSR+AHF APS +RRIIMSAPLS +LR KYNVRSLPIRK DEV V RGQYKG EGKV+TCYRKK+VI+++R+ R+K N   VP+GIHPSN  ITKIK+DKDRKAIL+RKNR A  EKGK   +D  V     MADVD
Sbjct:    1 MKYSASVSSSRRKSRRAHFQAPSHMRRIIMSAPLSQELRSKYNVRSLPIRKDDEVLVQRGQYKGREGKVVTCYRKKYVIYLDRVQREKVNGQTVPIGIHPSNVTITKIKLDKDRKAILERKNRSAALEKGKGKFTDAEVQGGAAMADVD 149          
BLAST of Gvermi5640.t1 vs. uniprot
Match: A0A7S3HX90_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3HX90_9SPIT)

HSP 1 Score: 188 bits (477), Expect = 9.720e-59
Identity = 102/145 (70.34%), Postives = 122/145 (84.14%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 144
            MK S  VSSSRRKSRKAHFTAPSSVRRIIMSA LSS+LR+K+NVRS+P+RK DEV VVRG YKG EGKV+ CYRKK+VIHI+RITR+K +   V VGIHPS CVITK+K+DKDR+AIL+RK++ +K +KGK++E D    M DVD
Sbjct:   16 MKFSPNVSSSRRKSRKAHFTAPSSVRRIIMSAALSSELRKKHNVRSMPVRKDDEVSVVRGTYKGREGKVIQCYRKKWVIHIDRITREKQSGATVQVGIHPSKCVITKLKLDKDRRAILERKDKTSKAKKGKYTEQD--AAMQDVD 158          
BLAST of Gvermi5640.t1 vs. uniprot
Match: A9NXB2_PICSI (KOW domain-containing protein n=3 Tax=cellular organisms TaxID=131567 RepID=A9NXB2_PICSI)

HSP 1 Score: 185 bits (469), Expect = 1.090e-57
Identity = 99/147 (67.35%), Postives = 120/147 (81.63%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKN--REAKQEKGKFSESDVNVPMADVD 144
            MK +  VSSSRRKSRKAHFTAPSSVRRI+MSAPL+ DLR KYNVRS+PIRK DEV+VVRG +KG EGKV+  YRKK+VIH+ERITRDK N   V VG+HPS  ++TK+K+DKDRK++L+RK   R A++ KGKF+  DV  P+ DVD
Sbjct:    1 MKYNPRVSSSRRKSRKAHFTAPSSVRRILMSAPLNPDLRNKYNVRSIPIRKDDEVQVVRGSFKGREGKVVQVYRKKWVIHVERITRDKVNGSTVNVGVHPSKVIVTKLKLDKDRKSLLERKGKGRAAEKGKGKFTAEDVAQPLQDVD 147          
BLAST of Gvermi5640.t1 vs. uniprot
Match: A0A7S3B8W9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B8W9_9EUKA)

HSP 1 Score: 185 bits (469), Expect = 1.200e-57
Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 144
            MK S  VSSSRRKSRKAHFTA SS RRIIMSA LSS+LR KY+VRS+P+RK DEV VVRG YKG EGKV+ CYRKK+VIH+ERITR+KA+   V VGI+ S CVITK+K+DKDRKAIL+RKN+E K +KGK   ++  V MADVD
Sbjct:    6 MKFSPNVSSSRRKSRKAHFTASSSQRRIIMSAALSSELRNKYHVRSMPVRKDDEVSVVRGTYKGREGKVIQCYRKKWVIHVERITREKASGATVQVGINTSKCVITKLKLDKDRKAILERKNKENKSDKGKGKFTEQEVAMADVD 150          
BLAST of Gvermi5640.t1 vs. uniprot
Match: D8QWN3_SELML (KOW domain-containing protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QWN3_SELML)

HSP 1 Score: 183 bits (465), Expect = 4.430e-57
Identity = 100/147 (68.03%), Postives = 120/147 (81.63%), Query Frame = 0
Query:    1 MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPSNCVITKIKMDKDRKAILDRKN--REAKQEKGKFSESDVNVPMADVD 144
            MK + AVSSSRRK RKAHF+APSSVRRI+MSA LSSDLR K+NVRS+PIRK DEV++VRG +KG EGKV   YRKK+VIH+ERITR+K N   V VG+HPSN VITK+K+DKDRKA+LDRK   R A++ KGKF+  DV  P+ +VD
Sbjct:    1 MKNNPAVSSSRRKCRKAHFSAPSSVRRILMSATLSSDLRNKHNVRSVPIRKDDEVQIVRGSFKGREGKVTQVYRKKWVIHVERITREKVNGATVNVGVHPSNVVITKLKLDKDRKALLDRKGKGRAAEKGKGKFTAEDVAPPLQEVD 147          
The following BLAST results are available for this feature:
BLAST of Gvermi5640.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPT5_9FLOR9.940e-9095.1460S ribosomal protein L26-1 n=1 Tax=Gracilariopsis... [more]
Q7XY99_GRIJA2.420e-8185.42Ribosome protein L26 n=1 Tax=Griffithsia japonica ... [more]
R7QKP4_CHOCR4.670e-7984.03Ribosomal protein L26 n=1 Tax=Chondrus crispus Tax... [more]
A0A7S1XEL1_9RHOD1.350e-6072.11Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0HHD8_9EUKA2.500e-6072.11Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S1TM20_9RHOD1.730e-5969.80Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S3HX90_9SPIT9.720e-5970.34Hypothetical protein (Fragment) n=1 Tax=Favella eh... [more]
A9NXB2_PICSI1.090e-5767.35KOW domain-containing protein n=3 Tax=cellular org... [more]
A0A7S3B8W9_9EUKA1.200e-5770.34Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
D8QWN3_SELML4.430e-5768.03KOW domain-containing protein n=1 Tax=Selaginella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPFAMPF16906Ribosomal_L26coord: 8..120
e-value: 2.3E-38
score: 130.5
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealTIGRFAMTIGR01080TIGR01080coord: 8..120
e-value: 1.4E-44
score: 149.1
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPANTHERPTHR1114360S RIBOSOMAL PROTEIN L26 FAMILY MEMBERcoord: 1..130
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..139
e-value: 4.5E-52
score: 177.8
IPR041988Ribosomal protein L26/L24, KOW domainCDDcd06089KOW_RPL26coord: 53..104
e-value: 5.29418E-12
score: 55.5986
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 8..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:835606..836040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5640.t1Gvermi5640.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 835606..836040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5640.t1 ID=Gvermi5640.t1|Name=Gvermi5640.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=145bp
MKRSGAVSSSRRKSRKAHFTAPSSVRRIIMSAPLSSDLRQKYNVRSLPIR
KHDEVRVVRGQYKGEGKVLTCYRKKFVIHIERITRDKANQMQVPVGIHPS
NCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005756Ribosomal_L26/L24P_euk/arc
IPR014722Rib_L2_dom2
IPR041988KOW_RPL26/RPL24
IPR008991Translation_prot_SH3-like_sf