Gvermi5613.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5613.t1
Unique NameGvermi5613.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length666
Homology
BLAST of Gvermi5613.t1 vs. uniprot
Match: A0A2V3IGG3_9FLOR (DEAD-box ATP-dependent RNA helicase 28 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGG3_9FLOR)

HSP 1 Score: 912 bits (2358), Expect = 0.000e+0
Identity = 501/685 (73.14%), Postives = 545/685 (79.56%), Query Frame = 0
Query:    1 MEDADGFVRTLPDAADSDFSDDDASQLMFGSDDDGGAEGVSASFFEAHKPAAWDLSDARKEAASLRPFQSSIDDKIRGALGKIGEQRSYPQRDG------------------------HHGHEDASXXXXXXXXXXXXXXXAGKCGEEHGDDELNAPEEQHASNLKKGRKRLRKEKAAAKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLLQAGIDNSTRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQKQDEKVKARREKGLPETRDEKSXXXXXXXXXXXXXXXXXXXXXXXXEGTYSKQRAXARISKRKK 661
            MEDADGFVRTLPD+AD   SDDD+S+LMFGSDD+      SA FFE   PA WDLSDARKEAA+LRPFQ+SID+KIRGALG+IG   + P  D                         +HG E  S                 K        E     E      KKGRKRLRKEKAAAK+F  L LSKPL+KAVDVL+W+QPTPIQASAIPY++AGRDVC SAVTGSGKT AFVLPVLERLLQAGIDNSTRVIILLPTRELAAQCH+VVQSLAKYTS+RAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDH+RNAHSFSLDDIE+LIMDEADRLLEMGFQAEV+QIV ATP +RQTLLFSATMNTQ+  LIKLSL+NP+NLN+DPMF+VA TL QEFVKLRP FE NK+ALLFSLVTRTFKTRTIVFFR KVTAHHFKILFGL+KLK+AELHGNLTQ+QRLAALD FR+G VDFLLCTDLAARGLDIAGVETVINYDMP ELKEYVHRVGRTARAGS GRACSIV  G+NDERKLLK I KRA+G+LVARVVPPA IGKW AWLD LQPALKAV++EE+QEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEG+K DEK KAR +KGLPE+ +EKS                        E +YSKQRA A+ SKRKK
Sbjct:    1 MEDADGFVRTLPDSADVGLSDDDSSELMFGSDDEVADGKPSAPFFEERTPAGWDLSDARKEAATLRPFQTSIDEKIRGALGRIGADAAPPSADDGLNKQSEKNGFDQGKTRDQNSEETNHGEEGDSYSESDTGEQTDAKPKLSKKSXXXXXXEP----ETDTPKAKKGRKRLRKEKAAAKTFDDLFLSKPLQKAVDVLEWTQPTPIQASAIPYILAGRDVCGSAVTGSGKTGAFVLPVLERLLQAGIDNSTRVIILLPTRELAAQCHSVVQSLAKYTSIRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHMRNAHSFSLDDIEVLIMDEADRLLEMGFQAEVEQIVDATPSARQTLLFSATMNTQIKGLIKLSLQNPMNLNVDPMFDVAATLCQEFVKLRPAFENNKDALLFSLVTRTFKTRTIVFFRQKVTAHHFKILFGLTKLKAAELHGNLTQSQRLAALDNFREGSVDFLLCTDLAARGLDIAGVETVINYDMPGELKEYVHRVGRTARAGSDGRACSIVRTGSNDERKLLKSIGKRAQGKLVARVVPPAVIGKWRAWLDNLQPALKAVVKEEKQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGEKMDEKAKARLDKGLPESAEEKSRRFVQQKKAFELEKRKRKRELADREESYSKQRADAKKSKRKK 681          
BLAST of Gvermi5613.t1 vs. uniprot
Match: R7QQT0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQT0_CHOCR)

HSP 1 Score: 689 bits (1777), Expect = 6.380e-239
Identity = 399/661 (60.36%), Postives = 463/661 (70.05%), Query Frame = 0
Query:    1 MEDADGFVRTLPDAADSDFSDDDASQLMFGSDD--DGGAEGVSASFFEAHKPAAWDLSDARKEAASLRPFQSSIDDKIRGALGKIGEQRSYPQRDGHHGHEDASXXXXXXXXXXXXXXXAGKCGEEHGDDELNAPEEQHASNLKKGRKRLRKEKAAAKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLLQAGIDNSTRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPS-RQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQKQDEKVKARREKGLPETRDEKSXXXXXXXXXXXXXXXXXXXXXXXXEGTYSKQRAXARISK 658
             ED DGFVRT+  A DSDF DDDAS L FGS+D  DG     +  FFE  +PA WDLSDAR EAA  RPFQ+SID+KI+     + E    P ++G    E+                       + G  E  A  E      KKG+KRLRKE+AAAK+F +LHLS+ L+KAV+ L+W +PTPIQ+ AIPY++AGRD+C SAVTGSGKT AFVLPVLERLLQAG+DN TRV++LLPTRELAAQCHAV+++LAKYTS+RAALAVGGLSNK QE ALRT PHI+VATPGRLIDHIRNAH FSLDDIE+LIMDEADRLLEMGFQAEV++IV  T  + RQTLLFSATM   L  LIKLSL+NPINL +DP+F+VA TL+QEF                                                LKSAELHGNLTQAQRLAALD FR G VDFLLCTDLAARGLDIAGVETVINYD+P E+KEYVHRVGRTARAG  GRACSIVC GNNDER+LLK I KRA+GQL AR+VPP+AIGKW AW+D L+PA KAVL+EE+QEKEMRLAEMEL+KA+N++KHSD IY+RPARTWFQ E QK++ KV AR  KGL  + +EK                         +  +SKQRA AR +K
Sbjct:  106 QEDPDGFVRTVEAAPDSDF-DDDASALEFGSEDGDDGDDVNPAKPFFEPERPAGWDLSDARAEAAKPRPFQTSIDEKIKTHQKGLTE----PPKEG--ADEEKGELRKR----------------KRGGPEAVADVEAE-KGPKKGKKRLRKERAAAKNFVELHLSRALQKAVEQLEWHEPTPIQSRAIPYILAGRDICGSAVTGSGKTGAFVLPVLERLLQAGVDNVTRVVMLLPTRELAAQCHAVIKNLAKYTSIRAALAVGGLSNKTQEAALRTRPHILVATPGRLIDHIRNAHGFSLDDIEVLIMDEADRLLEMGFQAEVEEIVRNTRAAGRQTLLFSATMTDDLKGLIKLSLQNPINLAVDPVFDVATTLAQEF------------------------------------------------LKSAELHGNLTQAQRLAALDTFRDGTVDFLLCTDLAARGLDIAGVETVINYDLPGEVKEYVHRVGRTARAGKQGRACSIVCSGNNDERRLLKGITKRAQGQLSARIVPPSAIGKWRAWIDSLEPAAKAVLKEEKQEKEMRLAEMELSKASNILKHSDDIYSRPARTWFQNEEQKRESKVNARMAKGLGPSLEEKVQAEKKKQKKLARERQTRDRESAELDQGHSKQRADARNAK 694          
BLAST of Gvermi5613.t1 vs. uniprot
Match: A0A7S2ZRE8_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRE8_9RHOD)

HSP 1 Score: 526 bits (1355), Expect = 1.180e-175
Identity = 290/489 (59.30%), Postives = 368/489 (75.26%), Query Frame = 0
Query:  124 EHGDDELNA-PEEQHASNLKKGRKRLR-KEKAAAKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLLQAGI--DNSTRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPS-RQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQKQDEKVKARR 607
            ++ D+EL+  PEE    ++ +  K  + K+KA    F  + LS+PLRKA+  L W + TPIQ+  IP V+AGRDVC SAVTGSGKTAAFVLPVLERLL  G    +S RV+ILLPTRELA QCHAVV SLA++TS++A LAVGGLSNKAQE ALR+   I+VATPGRLIDHIRNA  FSL+D+EILIMDEADRLLEMGF+ EV++IV   P   RQ+LLFSATM +Q+  L+ LSLR+P  +++D  F+VAE LSQEF+++R   E  ++A+L +LV+R+FKT+TIVFF  K  AH F+I+FGL+ L +AELHGNLTQAQRL AL +FR   VDFLLCTDLAARGLDI GV TVIN++MP  + EYVHRVGRTARAG  G+A S+V      ERKLL+ I ++A+ QL +R VP   I  W   +  +   ++AV++EER+EKE+RLA++E+ KA N++ H  +IY+RP RTWFQT  QKQ+ KVK RR
Sbjct:  146 DYSDEELDEEPEEAEDDDVLRETKPSKPKKKAKTVDFDSMKLSRPLRKAIYSLDWEKATPIQSRTIPLVLAGRDVCGSAVTGSGKTAAFVLPVLERLLHGGPGKSSSVRVLILLPTRELAVQCHAVVTSLAQFTSIKAGLAVGGLSNKAQEAALRSRLDILVATPGRLIDHIRNAQGFSLEDVEILIMDEADRLLEMGFKDEVEEIVRYCPSGGRQSLLFSATMTSQVQWLVNLSLRDPARVSVDSKFDVAEKLSQEFIRIRNKAEVYRDAVLLALVSRSFKTKTIVFFSQKHVAHRFRIMFGLAGLSAAELHGNLTQAQRLTALQQFRDSAVDFLLCTDLAARGLDIIGVNTVINFEMPRTMTEYVHRVGRTARAGKEGKAVSLVV---ESERKLLREIHRKARDQLTSRKVPSKVIDAWIDKIKSMSNDVEAVIKEERREKEIRLADVEIQKAENMLTHEKEIYSRPKRTWFQTGSQKQEVKVKTRR 631          
BLAST of Gvermi5613.t1 vs. uniprot
Match: A0A7S1TB49_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TB49_9RHOD)

HSP 1 Score: 501 bits (1289), Expect = 6.480e-167
Identity = 282/581 (48.54%), Postives = 390/581 (67.13%), Query Frame = 0
Query:   30 GSDDDGGAEGVSASFFEAHKPAAWDLSDARKEAASLRPFQSSIDDKIRGALGKIGEQRSYPQRDGHHGHEDASXXXXXXXXXXXXXXX-----AGKCGEEHGDDELNAPEE----QHASNLKKGRKRLRKEKAAAKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLLQ------AGIDNSTRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLR-PTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQT 594
            G D D  A  VS+   + H   AW+L  AR  A  L P Q++++ K+   L +   +R+   RD   G ED                       G     H D  L   +E         L+     + +E     +F  L LSKPL KAV  L W+  TP+Q + IP +++GRD+C SAVTGSGKTAAF+LP+LERLLQ      + +  ST+V++L PTRELA QC AVV +LA++TS+R A+AVGGL +++QE  LRT P I+VATPGRLIDH+RN   F++D++EIL+MDEADRLLE+GF+ EV++++     +RQTLLFSATM  Q+  L+KLSL  P+ + ++P+F+VA TL+QEFVK++  + E NK+A+L SL +R+F+++TIVFF  K  AH F +LFGL++LK+AELHGN+TQ QRL AL++FR    DFLLCTDLAARGLDI GV TVIN+DMP  L +Y+HRVGRTARAG+ GRA S++      +RKLLK I KRA+ +L AR++P  +I  W   +D + P ++ +L  ERQEKE+R A+++LN+A++L+ H+++IY+RP RTWF+T
Sbjct:   28 GRDSDFFAGVVSSRVTKRH---AWELGPARNAARPLGPGQTTVEHKVGQVLHQRKAKRARLVRDAKMGGEDEGERDHHGVDAKGKDVTRSVVDGGNERRSHEDKVLEEGDEVVDVSDEGGLESHENPVEEEHHGL-TFSDLMLSKPLLKAVAGLGWTTATPVQQATIPAILSGRDLCGSAVTGSGKTAAFILPILERLLQGRAFRTSQLHTSTKVVVLSPTRELAVQCQAVVVALARHTSIRCAMAVGGLGSRSQETDLRTRPEIVVATPGRLIDHLRNTKDFAVDEVEILVMDEADRLLELGFKEEVEELLRYFSSTRQTLLFSATMTPQVEWLVKLSLEKPLKVAVNPLFDVASTLTQEFVKVKGASLENNKDAVLLSLCSRSFRSKTIVFFGQKHVAHRFMLLFGLAELKAAELHGNMTQGQRLEALEQFRDEERDFLLCTDLAARGLDIVGVRTVINFDMPRTLTDYIHRVGRTARAGAAGRAISLI---EEQDRKLLKQIHKRARSKLAARIIPSDSIRTWRQRIDAMTPEVQQILSVERQEKELRAAQVQLNRADHLVHHAEEIYSRPKRTWFRT 601          
BLAST of Gvermi5613.t1 vs. uniprot
Match: A0A5J4Z161_PORPP (DEAD-box ATP-dependent RNA helicase 28 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z161_PORPP)

HSP 1 Score: 504 bits (1297), Expect = 4.990e-166
Identity = 265/460 (57.61%), Postives = 340/460 (73.91%), Query Frame = 0
Query:  149 RKEKAAAKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLLQAGIDN--------STRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQKQD 600
            +K+    +SF  L +SKPL KA++++ W  PTPIQ   +P  + GRDVC SAVTGSGKT AF LP++ERL+Q    +        +TRVI+LLP+RELA QCHAVV SL K+T++RAAL VGGLS+K QEV LR+ P I+VATPGRLIDH+RN   FSL+D+E+L++DEADR+LEMGF+ E+ +++   P  RQTLLFSAT+  Q+  L+ +SL NPI +  DP+ +VA +L QEFV++R   E+N++A+L +LV+R+F+T+TI+FF  K  AH FKILFGL  LK+ ELHGNL Q QRL +L+ FR G VDFLLCTDLAARGLDI G+ETVINYDMP  +KEYVHRVGRTARAG  GRA S++    + ERKLL  I KRA  +L  R VP +   KW   +D     L  VLREER EK++RLAEME+ KA+NLM H ++I +RPARTWFQT+ QK +
Sbjct:  232 KKQMQKRRSFADLKMSKPLLKAIELMGWHVPTPIQLKTLPIALEGRDVCGSAVTGSGKTGAFALPIIERLIQLNQASKGARANMLATRVIMLLPSRELAIQCHAVVSSLLKFTALRAALTVGGLSSKEQEVQLRSKPDIVVATPGRLIDHLRNTQGFSLEDVEVLVIDEADRMLEMGFKDEMDELLRFLPKKRQTLLFSATLTGQVEWLVNMSLDNPIRIAADPIMDVASSLDQEFVRIRGKNEQNRDAILLALVSRSFRTKTIIFFAQKHKAHRFKILFGLFGLKAGELHGNLAQVQRLESLENFRDGNVDFLLCTDLAARGLDIVGIETVINYDMPRTVKEYVHRVGRTARAGRGGRAVSLIM---DSERKLLNDIHKRALEKLTQRTVPVSVTNKWRERIDAAGAQLAEVLREERDEKQLRLAEMEVAKASNLMVHQEEIASRPARTWFQTKKQKDE 688          
BLAST of Gvermi5613.t1 vs. uniprot
Match: A0A7S0ZAT2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAT2_9RHOD)

HSP 1 Score: 485 bits (1249), Expect = 5.150e-160
Identity = 277/567 (48.85%), Postives = 369/567 (65.08%), Query Frame = 0
Query:   54 DLSDARKEAASLRPFQSSIDDKIRGALGKIGEQRSYPQRDGHHGHEDASXXXXXXXXXXXXXXXAGKCGEEHGDDEL---NAPEEQHASNLKKGRKRLRKEKAAAKS---FQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLLQAGIDN-------STRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQKQDEKVKARR 607
            DL+ A K+   L   Q+++DDKI+ AL    + +  PQ+      E+ S                 + G E   +EL   N   E                    +S   F+ L LS+ L KA+ VL W+ PTPIQ   IP  ++GRD+C SAVTGSGKT AF LP+LERL+Q+ +         +TRVI+LLP+RELA QCHAVV +L ++T +RAAL VGGL +KAQEVALR  P I+VATPGRLIDH+RN   FSL+D+E+L++DEADR+LE GF+ E+ +++   P  RQTLLFSAT+  Q+  L+ +SL  P+ + +D   +VA TL QEFV+LR   E N++A+L +L++RT ++RTI+FF  K  AH F+I+  +  L++AELHGNLTQAQRL AL +FR    DFLLCTDLAARGLDI  V  V+NY+MP  LKEYVHRVGRTARAG  GR+ S+V   ++ ERKLL  I KRAK +L  R VP A + KW   +D L   +K VL+ ER+EKE+R+A+ME  KA N+++H+D+I  RP RTWFQ+  QK D K + +R
Sbjct:   64 DLNSAIKDTQPLHKSQTTLDDKIQNALQNKSKTKMIPQKQ----EENRSKAEQEDKDCDDEV----ETGNEDTQNELVVENVDSEXXXXXXXXXXXXXXSSGGKQRSSVRFEDLKLSRGLLKAIAVLGWNVPTPIQEKTIPAALSGRDICGSAVTGSGKTGAFALPILERLVQSRVGTGGRSAAAATRVIMLLPSRELAVQCHAVVSALCRFTGIRAALTVGGLDSKAQEVALRGRPDIVVATPGRLIDHVRNTARFSLEDVEVLVIDEADRMLEFGFKDEMDELMKCIPSERQTLLFSATLTKQVEWLVNVSLHKPLRIAVDATLDVAATLRQEFVRLRGRAEPNRDAILIALLSRTVRSRTIIFFAQKHVAHRFQIILSMLGLRAAELHGNLTQAQRLDALQQFRDNNADFLLCTDLAARGLDIEHVHAVVNYNMPRTLKEYVHRVGRTARAGRSGRSISLV---DDSERKLLADIHKRAKDKLKQRTVPLAVVEKWRERIDGLDAQVKQVLQREREEKELRVAQMEAEKAVNMLEHADEIKNRPPRTWFQSNEQKVDLKKRMKR 619          
BLAST of Gvermi5613.t1 vs. uniprot
Match: D8S7V5_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S7V5_SELML)

HSP 1 Score: 466 bits (1199), Expect = 9.360e-152
Identity = 243/445 (54.61%), Postives = 331/445 (74.38%), Query Frame = 0
Query:  155 AKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLL-QAGIDNSTRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQK 598
            A SF +L++S+PL +A D L + QPTPIQA+ IP  +AGRD+C SAVTGSGKTAAF LP+LERLL +     + RV+I+ PTRELA Q H++++ LA++T +R +L VGGLS+K QEVALRTHP I+VATPGR+IDH+RN  S  L+++ IL++DEADRLLE+GF+ E+ ++V   P  RQT+LFSATM  +++ LIKLSL++P+ L+ DP      TL++E +++R   E +K A++ SL +R+ K++TI+F   KV AH  KILFGLS LKSAELHGNLTQAQRL AL+ FRK  VDFL+ TD+AARGLDI GVE+VIN + P E+K YVHRVGRTARAG  GR+ +++      +R LLK +AKRA  +L  RVV   +I  W   +++++  L  +L++ER+EK +R AEME NKA N+M +  +I+ARP +TWFQ++  K
Sbjct:  116 ASSFIELNVSRPLLRACDALGYRQPTPIQAACIPLALAGRDICGSAVTGSGKTAAFALPILERLLFRPRRIPAIRVLIITPTRELAVQLHSMIEKLAQFTDIRCSLVVGGLSSKVQEVALRTHPDIVVATPGRMIDHLRNTQSVGLEELAILVLDEADRLLELGFREEIHELVKLCPSRRQTMLFSATMTDEVSELIKLSLKSPVRLSADPSTERPSTLTEEVIRIRAGHEGDKEAIVLSLCSRSLKSKTIIFSGTKVEAHRLKILFGLSGLKSAELHGNLTQAQRLEALEAFRKQEVDFLIATDVAARGLDIIGVESVINLECPKEIKTYVHRVGRTARAGRHGRSVTLM---TEQDRLLLKAVAKRAGSKLQKRVVAATSIASWRERIEKMEEDLVQILQQEREEKFLRKAEMEANKAQNMMDYEAEIFARPKKTWFQSQQDK 557          
BLAST of Gvermi5613.t1 vs. uniprot
Match: A0A7S2WP83_9STRA (Hypothetical protein (Fragment) n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WP83_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 5.320e-151
Identity = 253/449 (56.35%), Postives = 326/449 (72.61%), Query Frame = 0
Query:  152 KAAAKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLL-QAGIDNSTRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQKQ 599
            K    SF +L+LS+PL +AV  L + +PTPIQA AIPY +AGRD+C SAVTGSGKTAAFVLPVLERLL +     +TRV+I+ PTREL  Q  ++++ LA+YT ++AA  VGGLS   Q + LR+ P I+VATPGRLIDH+RN  S  LDD+EILI+DEADRLLE+GF  EV ++V   P SRQTLLFSATM T +N L +LSL  P+ +  DP++++A  L QEFV++RP+ ER++ A+L +L TR+FK++ IVFF  K  AH   I+FGL  LK+AELHGNLTQ QRL AL  FR G VDFLLCTDLA+RGLDI GVE VINY+M  +L  Y+HRVGRTARAG  GRA   V +    +R+L K + KR+K  + +R +P   I      +  L   ++ VL++ER EKE RLAEMELNKANN+++H ++I ARP +TWFQ+  +KQ
Sbjct:  219 KPTVASFVELNLSRPLIRAVQALGFDRPTPIQAKAIPYALAGRDICGSAVTGSGKTAAFVLPVLERLLFRPKRIAATRVLIVTPTRELTQQVLSMLEKLAQYTDIKAAGIVGGLSMSMQAMELRSRPDIVVATPGRLIDHVRNTQSVDLDDVEILILDEADRLLELGFMDEVMELVKFCPKSRQTLLFSATMTTSVNQLAELSLNRPVRVQADPLYDMAARLVQEFVRIRPSRERDREAMLLALCTRSFKSKVIVFFSRKHHAHRMGIIFGLCGLKAAELHGNLTQRQRLEALQRFRDGHVDFLLCTDLASRGLDIKGVEVVINYEMSRDLSTYIHRVGRTARAGRGGRA---VTLTGERQRQLTKEVLKRSKQNVKSRTIPDKVIDSMKEQIVDLAEDIEDVLQQERMEKEARLAEMELNKANNVIEHHNEIIARPVKTWFQSAKEKQ 664          
BLAST of Gvermi5613.t1 vs. uniprot
Match: G7J1D1_MEDTR (DEAD-box ATP-dependent RNA helicase n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7J1D1_MEDTR)

HSP 1 Score: 464 bits (1193), Expect = 1.020e-150
Identity = 245/446 (54.93%), Postives = 332/446 (74.44%), Query Frame = 0
Query:  154 AAKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLL-QAGIDNSTRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQK 598
            +A SF QL+LS+PL +A +VL +S+PTPIQA+ IP  + GRD+C SA+TGSGKTAAF LP LERLL +    ++ RV+IL PTRELAAQ  ++++SL+++T +R  L VGGLS K QEVALR+ P I+VATPGR+IDH+RN+ S  LDD+ +LI+DEADRLLE+GF AE+Q++V   P  RQT+LFSATM  +++ LIKLSL  P+ L+ DP+     +L++E V+LR   E N+ A+L ++ ++TF ++ I+F   K  AH  +I+FGLS LK+AELHGNLTQAQRL AL+EFRK  VDFL+ TD+AARGLDI GV+TVIN+  P +L  YVHRVGRTARAG  G A + V    +++R LLK IAKRA  +L +R+V   +I KWS  +++++  +  VL+EER+E  +R AEME  KA N++ H D+I++RP RTWF TE +K
Sbjct:  149 SADSFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQEVALRSRPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQELVRVCPKKRQTMLFSATMTEEVDDLIKLSLSKPLRLSADPLAKRPASLTEEVVRLRRMREVNQEAVLLAMCSKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLGALEEFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFV---TDNDRSLLKAIAKRAGSKLKSRIVAEQSILKWSQVIEQMEDQISEVLQEEREEMILRKAEMEATKAENMIAHKDEIFSRPKRTWFVTEKEK 591          
BLAST of Gvermi5613.t1 vs. uniprot
Match: UPI001C4EC125 (DEAD-box ATP-dependent RNA helicase 28-like n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001C4EC125)

HSP 1 Score: 462 bits (1189), Expect = 1.360e-150
Identity = 245/445 (55.06%), Postives = 327/445 (73.48%), Query Frame = 0
Query:  155 AKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASAVTGSGKTAAFVLPVLERLL-QAGIDNSTRVIILLPTRELAAQCHAVVQSLAKYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLDDIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALIKLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFKTRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGLVDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRACSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPALKAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQK 598
            A SF +L+LS+PL +A + L + +PTPIQA+ IP  + GRD+C SA+TGSGKTAAF LPVLERLL +    ++ RV++L PTRELA Q H++++ LA++T VR  L VGGLS K QEVALR+ P I+VATPGR+IDH+RN+ S  L+D+ +LI+DEADRLLE+GF AE+Q++V   P  RQTLLFSATM  +++ LIKLSL  P+ L+ DP       L++E V++R   E N+ A+L +L ++TF ++ I+F   K+ AH  KILFGL  LK+AELHGNLTQ QRL ALD FRK  VDFL+ TD+AARGLDI GV+TVIN+  P +L  YVHRVGRTARAG  G A + V    +++R +LK IAKRA  +L +R+V   +I KWS  +++L+  + AVL+EER+E+ +R AEME  KA N++ H D+IY+RP RTWF TE +K
Sbjct:  117 ANSFMELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFTLPVLERLLFRPKRIHAIRVLVLTPTRELAVQVHSMIEKLAQFTDVRCCLIVGGLSTKMQEVALRSMPDIVVATPGRMIDHLRNSQSVGLEDLAVLILDEADRLLELGFSAEIQELVHLCPKGRQTLLFSATMTEEVDELIKLSLSKPLRLSADPSAKRPARLTEEVVRIRRMREANQEAVLLALCSKTFTSKVIIFSGTKLAAHRLKILFGLLGLKAAELHGNLTQVQRLDALDLFRKQQVDFLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVM---DNDRSVLKAIAKRAGSKLRSRIVAEQSITKWSQIIEQLEDQIAAVLQEEREERALRKAEMEATKAENMIAHKDEIYSRPKRTWFATEKEK 558          
The following BLAST results are available for this feature:
BLAST of Gvermi5613.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGG3_9FLOR0.000e+073.14DEAD-box ATP-dependent RNA helicase 28 n=1 Tax=Gra... [more]
R7QQT0_CHOCR6.380e-23960.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZRE8_9RHOD1.180e-17559.30Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TB49_9RHOD6.480e-16748.54Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z161_PORPP4.990e-16657.61DEAD-box ATP-dependent RNA helicase 28 n=1 Tax=Por... [more]
A0A7S0ZAT2_9RHOD5.150e-16048.85Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
D8S7V5_SELML9.360e-15254.61Uncharacterized protein n=4 Tax=Selaginella moelle... [more]
A0A7S2WP83_9STRA5.320e-15156.35Hypothetical protein (Fragment) n=2 Tax=labyrinthu... [more]
G7J1D1_MEDTR1.020e-15054.93DEAD-box ATP-dependent RNA helicase n=1 Tax=Medica... [more]
UPI001C4EC1251.360e-15055.06DEAD-box ATP-dependent RNA helicase 28-like n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 551..576
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 588..665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 595..653
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..149
NoneNo IPR availablePANTHERPTHR47959:SF1ATP-DEPENDENT RNA HELICASE RHLEcoord: 154..652
NoneNo IPR availablePANTHERPTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDcoord: 154..652
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 372..504
e-value: 3.09766E-49
score: 166.143
NoneNo IPR availableCDDcd17947DEADc_DDX27coord: 167..360
e-value: 1.58049E-104
score: 313.808
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 410..495
e-value: 3.6E-30
score: 116.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 390..495
e-value: 1.8E-27
score: 95.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 390..537
score: 18.346504
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 175..375
e-value: 2.0E-53
score: 193.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 187..360
score: 30.572176
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 367..532
e-value: 9.5E-39
score: 134.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 122..363
e-value: 1.1E-76
score: 259.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 299..522
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 155..361
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 180..346
e-value: 9.1E-47
score: 159.1
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 306..314
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 156..184
score: 10.513013

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:748827..750824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5613.t1Gvermi5613.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 748827..750824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5613.t1 ID=Gvermi5613.t1|Name=Gvermi5613.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=666bp
MEDADGFVRTLPDAADSDFSDDDASQLMFGSDDDGGAEGVSASFFEAHKP
AAWDLSDARKEAASLRPFQSSIDDKIRGALGKIGEQRSYPQRDGHHGHED
ASDAHEPNASAAEPADEAGKCGEEHGDDELNAPEEQHASNLKKGRKRLRK
EKAAAKSFQQLHLSKPLRKAVDVLQWSQPTPIQASAIPYVMAGRDVCASA
VTGSGKTAAFVLPVLERLLQAGIDNSTRVIILLPTRELAAQCHAVVQSLA
KYTSVRAALAVGGLSNKAQEVALRTHPHIIVATPGRLIDHIRNAHSFSLD
DIEILIMDEADRLLEMGFQAEVQQIVSATPPSRQTLLFSATMNTQLNALI
KLSLRNPINLNIDPMFNVAETLSQEFVKLRPTFERNKNALLFSLVTRTFK
TRTIVFFRHKVTAHHFKILFGLSKLKSAELHGNLTQAQRLAALDEFRKGL
VDFLLCTDLAARGLDIAGVETVINYDMPTELKEYVHRVGRTARAGSVGRA
CSIVCIGNNDERKLLKIIAKRAKGQLVARVVPPAAIGKWSAWLDRLQPAL
KAVLREERQEKEMRLAEMELNKANNLMKHSDQIYARPARTWFQTEGQKQD
EKVKARREKGLPETRDEKSRRSSQQKKEAELERRKRNRELEDREGTYSKQ
RAEARISKRKKRKRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif