Gvermi5594.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5594.t1
Unique NameGvermi5594.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length729
Homology
BLAST of Gvermi5594.t1 vs. uniprot
Match: A0A2V3IJN0_9FLOR (Splicing factor SF3a60-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJN0_9FLOR)

HSP 1 Score: 605 bits (1560), Expect = 2.560e-209
Identity = 311/467 (66.60%), Postives = 367/467 (78.59%), Query Frame = 0
Query:    2 GDLETLRQLHEDIEILQRLAVAALHSRSTPSTPHHRLATVHPPLRCARDAEQLAADLAALAASKAATLLESYQTPLPAPPADPLSSFYSQLRDLREAHRARLPVTPVSRDAALILQAYNPPAFSGEECDGRYLDLLQHFRTFLNLRKSPERGTQSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSHMDGALSEIAASYPTYEQLLERLSADQLRDRLVQFGLKCGGRPQDRAKRLLTAARERNYGRSAVLERVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALEALADGAEVAEDDELESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGL 468
             +LE +RQ+HED+E LQ LA AAL SR  PSTPH RL  + P L+ ARDAEQLAADL A A+ KAA L   Y+  LP    D LSSFY+QLRDLR+ HR+R  +   SRDAAL+  +Y    FSGEEC GRYLD+L H++T+LN+ K      QSVEYYQYVR ++ DF SL   VRTS+ YE YL+ L  YL DFARRAHPL+ TD H+ +A E+A   ++  LSEIAA+Y T EQLLE+L  D LR+RLV+ GLKCGGRPQ+RAKRLL AARE  YGR A+LER + FAL+ +LAPER ATVAN+QKRL LSY EIEAERRA+EA+ADG E  E +++EST+YNPKD+PLGWDGKPIPYWMYKLHGLNHEF+CEICGN TYKGPRAFERHFTD+QHVQGLRRLGIGYSKAYMM+T I+DALKL  +M  ++ +AQFDED +MEFED  GNVMNRKTY+DLLRQGL
Sbjct:    3 SELENMRQMHEDLETLQHLAAAALQSRVEPSTPHQRLKWIEPALQTARDAEQLAADLCAHASKKAAVLCSQYEQTLPRREDDALSSFYAQLRDLRDLHRSRPALASSSRDAALLQASYKAATFSGEECGGRYLDVLCHYQTYLNVSK------QSVEYYQYVRDNISDFCSLAGGVRTSKAYERYLSELEKYLKDFARRAHPLEGTDEHMQRAHEEARKQIEKMLSEIAATYGTDEQLLEQLGGDALRERLVEVGLKCGGRPQERAKRLLKAAREMKYGRIALLERSVRFALDKVLAPERRATVANIQKRLGLSYAEIEAERRAMEAVADGVE-EEVEQVESTLYNPKDVPLGWDGKPIPYWMYKLHGLNHEFKCEICGNGTYKGPRAFERHFTDSQHVQGLRRLGIGYSKAYMMITGIEDALKLEARMRLTEAQAQFDEDRDMEFEDAAGNVMNRKTYNDLLRQGL 462          
BLAST of Gvermi5594.t1 vs. uniprot
Match: R7Q5E3_CHOCR (Matrin-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5E3_CHOCR)

HSP 1 Score: 467 bits (1201), Expect = 5.940e-155
Identity = 250/480 (52.08%), Postives = 330/480 (68.75%), Query Frame = 0
Query:    7 LRQLHEDIEILQRLAVAALHSRSTPSTPHHRLATVHPPLRCARDAEQLAADLAALAASKAATLLESYQTP---------LPAPPADPLSSFYSQLRDLREAHRA--------RLPVTPVSRDAALILQAYNPPAFSGEECDGRYLDLLQHFRTFLNLRKSPERGTQS-VEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSHMDGALSEIAASYPTYEQLLERLSADQLRDRLVQFGLKCGGRPQDRAKRLLTAARERNYGRSAVLERVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALEALADGAEVAEDDELESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGL 468
            +RQ HEDIE L+ LA  AL SR++    H RLA +  PL   R AEQL   L  LAA K  +L   Y            L AP  DPLS+FY++LR +R+AHR+        R   T   RD AL+  +++P  FSGEE +GRYLD ++H+  +LN+    ++G ++ +EYY+YV + V DF ++PP+VR+S  Y  YL+ L  Y  DFA+RAHP+DR + H+  A  +    M+  L +I+    + + +L+ L AD ++  LV  G KCGGRP+DRA RLL AAR   +G   +LE  + FA+  +LA E+ ATVANV+K+L+LSY EIEAER A EA   GA+  ED+E+EST+YNPKD+PLGWDGKPIPYWMY+LHGLNHEF+CEICGNATYKGPRAFERHFTD+QHVQGL+ LGIGYSKA++M+T+I DA  L++K+ K  + A FDED EMEFED  GN++N+KTY DL++QGL
Sbjct:    1 MRQTHEDIETLKHLASCALQSRTSIPISHPRLAPLSHPLPTLRSAEQLTQQLVHLAAEKTLSLSSLYSNDDTLHRVNPDLSAP--DPLSAFYAKLRQVRDAHRSVTFGVTQPRPVPTEGERDLALLHASHHPVVFSGEEGNGRYLDFMRHYTAYLNVMSKAKQGKENQIEYYEYVDKAVTDFDAVPPSVRSSHVYSRYLSDLLAYCVDFAQRAHPMDRVEEHMEVAEANTRKAMEEKLKDISHRMASPQAVLDELGADGVKKELVSLGQKCGGRPEDRAARLLKAARNGKFGERVILEGAVKFAVEEVLAEEKRATVANVRKKLSLSYAEIEAERIADEAA--GAD--EDEEMESTLYNPKDVPLGWDGKPIPYWMYRLHGLNHEFKCEICGNATYKGPRAFERHFTDSQHVQGLKCLGIGYSKAFLMITRIQDARMLNEKLTKQSEAAAFDEDAEMEFEDQEGNILNKKTYTDLIKQGL 474          
BLAST of Gvermi5594.t1 vs. uniprot
Match: A0A7S2ZB02_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZB02_9RHOD)

HSP 1 Score: 278 bits (711), Expect = 1.270e-81
Identity = 174/409 (42.54%), Postives = 227/409 (55.50%), Query Frame = 0
Query:   81 PADPLSSFYSQLRDLREAH---RARLPVTPVSRDAALILQAYNPPAFSGEECDGRYLDLLQHFRTFLNLRKSPERGTQSVEYYQYVR--QHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSHMDGALSEIA--ASYPTYEQLLERLSADQLRDRLVQFGLKCGGRPQDRAKRLLTAARERNYGRSAV-----------LERVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALE--ALADGAEVAEDDELESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKM-NKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGL 468
            P   +S FY +L+ ++ AH    A   +T    D    +      +FSGEE  G+YLDL +    F+NL+          E Y Y+   Q+   F SLP  VR    Y  Y+  L +YL DFA R  PL   +  L+  R+ A   M  A  ++   + Y + + L +  S D L+  L + GLK GG P  RA+RL  A ++   G + +           LE  + +    +LA    +T  NV+K+LALSY E+E ER A E     D  E   D   E TI+NPKD+PLGWDGKPIPYW+YKLHGLNHEFRCE+CG+ TY+GPR FERHFT+ +H   L+ LG+ YS+ Y MVT+IDD LKL DK  N S  +     D+E EFED  GNV NRKTY DL RQGL
Sbjct:  111 PEKSMSLFYERLKAIQSAHTGDHAEEVMTAGQLDRQAAMSVSPEVSFSGEEAHGKYLDLHESHTKFINLQGIDP------EVYDYITFLQNFYAFGSLPEDVRRRPDYNDYIRGLLNYLIDFADRVFPLKFVEDKLAGVRKKAEEKMSKASDDLVDVSKYDSPQALEKGESPDALKQALKKMGLKFGGTPAQRAERLFKAHKKSANGTNGIGGVGLRRETELLEAQVKYMTEDILADLLQSTRMNVEKKLALSYEELEQERYAEENPVNPDDDEDGSDSGEEKTIHNPKDVPLGWDGKPIPYWLYKLHGLNHEFRCEVCGDVTYRGPRNFERHFTEARHTHNLKMLGVQYSRYYYMVTQIDDVLKLADKSRNLSASQLNRTADDE-EFEDAEGNVFNRKTYEDLRRQGL 512          
BLAST of Gvermi5594.t1 vs. uniprot
Match: UPI001E1D8004 (splicing factor 3A subunit 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8004)

HSP 1 Score: 256 bits (653), Expect = 2.040e-75
Identity = 136/286 (47.55%), Postives = 183/286 (63.99%), Query Frame = 0
Query:  155 QSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSHMDGALSEIAASYPTYEQLLERLSADQLRDRLVQFGLKCGGRPQDRAKRLLTAA------------RERN------YGRSAVLERVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALEALAD-GAEVA------EDDELESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYM 415
            Q ++Y  YV+  + DF+S+PP++R S  Y  YL+ L  YL  FA RAHPL      +S +     S +   L+++   + + E+ L+ + A+ +R+ L+  GLKCGG P DRA+RL  A+            R  N       G   VLE ++   +  +LA ER ATV N++K+ +LS+ E+EAER A EA+A+ GA +A      ED+E+E  +YNPKD+PLGWDGKPIPYW+YKLHGLNHEF+CEICG ATYKGPRAFERHFTD QHV GLR LG+ Y KA +
Sbjct:   42 QKLDYLAYVKTEMTDFTSVPPSIRNSPGYRHYLSDLLTYLESFADRAHPLSGVREDISHSETSLKSDLYARLAKLRDRFKSPEEALQGMGANDIREELLMLGLKCGGSPLDRARRLFDASQSVLPTADDSISRPENPIGNQVLGERVVLEGLIGHIMEKVLAEERRATVLNIEKKQSLSWIELEAERVAEEAVAERGALLAKDRRQEEDEEVEQPVYNPKDVPLGWDGKPIPYWLYKLHGLNHEFKCEICGEATYKGPRAFERHFTDAQHVNGLRCLGVNYFKALL 327          
BLAST of Gvermi5594.t1 vs. uniprot
Match: M2Y7A7_GALSU (Splicing factor 3A subunit 3 isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7A7_GALSU)

HSP 1 Score: 257 bits (656), Expect = 1.090e-73
Identity = 183/518 (35.33%), Postives = 256/518 (49.42%), Query Frame = 0
Query:    4 LETLRQLHEDIEILQRLAVAALHSRSTPSTPHHRLAT---VHPPLRCARDAEQLAADLAALAASKAATLLESYQTPLPAPPADPLSSFYSQLRDLREAHR----------ARLPVTPVSRDAALILQAYNPPAFSGEE-----CDGRYLDLLQHFRTFLNLRKSPERGTQSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSHMDGALSEIAASYPTYEQLLE---RLSADQLRDRLVQFGLKCGGRPQDRAKRLLTAARE-----------RNYGRS------------------AVLERVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALEALADGAEVAEDDEL---ESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGL 468
            LE  R  HED+E   +LA   L  +     P  +L T   V   +   +D  Q    L        A  +E  + P      + LS FY +LR+++E++R          +   +T   ++  L+        FSGEE       GRYLDL   +  F+N++ +PE     V+Y  Y+      F     +++  + Y+ YL++L  YL DF R+  PL    A                +SE   +   +    E    +S ++++  L+  GLKCGG P +RAKRL     +           R Y R+                  A +E ++ +    +LA E A T   V+K+L+ SY EIEAER + E      E          E  IYNPK++PLGWDGKPIPYW+YKL+GLN E+ CEICGN  Y+GPRAFERHFT+ +H+QGLR LGI YS+ + MVT I+DAL+L  K+ K+Q E +     E EFED  GNV NR+TY DL RQGL
Sbjct:    6 LELTRTYHEDVERAVKLATKLLKEKPKSYLP--KLETEQRVRNLVEFIQDRYQKLLRLYEDEDGTRAAEIEYLEQP------ERLSLFYERLREIKESYRKSGGRGNELESSSTLTAKKQEEELLALTEPKLVFSGEENYGYFAFGRYLDLSSLYEAFVNIKGAPE-----VDYIDYLSTFYK-FEFFSKSLKNKKAYQTYLSSLLSYLEDFGRKLRPLRDERAERDSLEVQFEQQWKPEVSEPTINLDKFNSASELEANMSPEEMKQILLSMGLKCGGTPSERAKRLFETKNKELSSLPASMFSRKYSRNSGNGDQKTTSESANRKEVAKMEMLIQYLCEEILADEVANTKTYVEKKLSQSYTEIEAERISEEQALQNPEEESXXXXXXXEKPIYNPKNIPLGWDGKPIPYWLYKLYGLNLEYSCEICGNENYRGPRAFERHFTEAKHIQGLRFLGIQYSRHFYMVTGIEDALRLDAKL-KNQMELERFRPEEEEFEDAQGNVFNRRTYEDLRRQGL 508          
BLAST of Gvermi5594.t1 vs. uniprot
Match: A0A7S3F495_9EUKA (Hypothetical protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F495_9EUKA)

HSP 1 Score: 246 bits (627), Expect = 1.570e-69
Identity = 191/522 (36.59%), Postives = 263/522 (50.38%), Query Frame = 0
Query:    5 ETLRQLHEDIEILQRLAVAALHSRSTPSTPHHRLATVHPPLRCARDAEQLAADLAALAASKAATLLESYQTPLPAPPADP--------------LSSFYSQLRDLREAHRARLPVTP-VSRD--AAL--ILQAYNPPAFSGEECDGRYLDLLQHFRTFLNLRKSPERGTQSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSH------------MDGALSEIAASYPTYEQLLERLSADQLRDRLVQFGLKCGGRPQDRAKRLLTA-------------ARER---------NYGRSAV-LERVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALEALADGAEVAEDDELEST--IYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGLAD 470
            E  R LHE++EIL+R     L   ST             P + ARD  Q+ A+L +    +   L   Y+       AD                SSFY QL+ +R+ HR R P  P +S D  A L  +L++     F+GEE +G+++D+ +    FLNL+     G   V+Y  Y++  V+D      A  ++  Y+ YL ALH Y  +F RR  PL   +  L  A+ED  S             + G + E+  S       LE L  + L+  L   GLKCGG  ++RA+RL  A             A+ +         + GR A  L   L   +  LLA     T   ++K+ A ++ EIE + +A  A  D   +A++DE E    IYNP +LPLGWDGKPIPYW+YKLHGLN EF+CEICGN +Y GPRAFERHF + +H  G++ LGI  +K +  +T I+DA  L  K+   Q    F+ + + EFED  GNVMNRKTY DL RQGL D
Sbjct:   11 ERTRSLHEELEILERAMYTELGDPSTVKLKR--------PDQIARD--QVVANLLSAHQQRTEQLQHIYED------ADGSRRDEVNGMSGTGVFSSFYDQLKAIRDYHR-RFPKAPSMSHDEHALLTEVLESAPDAGFTGEEAEGKFVDMHELHEMFLNLK-----GVAKVDYATYLKA-VNDVQRTGMATASTAAYQRYLGALHAYWYEFLRRTQPLMPLEQMLGSAKEDFESRWKQGSVTRWQSAVTGVVKEVDLSKIEAPAELEVLGLETLKAALSLRGLKCGGSLKERAERLFLAKSVPLDQMPKQHIAKSKPAVAAMGVTHEGRHATALAEELVGRMGELLADCLEDTADMIEKKQARTFEEIERDLQA--AAEDDQPMADEDEEEDDKPIYNPLNLPLGWDGKPIPYWLYKLHGLNLEFKCEICGNYSYWGPRAFERHFQEWRHAYGMKCLGIPNTKPFHGITLIEDAYTLWAKLKVEQGGGDFNPELDEEFEDRAGNVMNRKTYTDLARQGLLD 507          
BLAST of Gvermi5594.t1 vs. uniprot
Match: A0A5B8MTJ1_9CHLO (Subunit 3 of splicing factor 3A n=4 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MTJ1_9CHLO)

HSP 1 Score: 245 bits (625), Expect = 3.990e-69
Identity = 171/519 (32.95%), Postives = 255/519 (49.13%), Query Frame = 0
Query:    4 LETLRQLHEDIEILQRLAVAALHSRSTPSTPHHRLATVHPPLRCARDAEQLAADLAALAASKAATLLESYQTPLPAPPADPLSSFYSQLRDLREAHRAR--LPVTPVSRDAALILQAYNPPAFSGEECDGRYLDLLQHFRTFLNLRKSPERGTQSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSHMD------------GALSEIAASYPTYEQL--------LERLSADQLRDRLVQFGLKCGGRPQDRAKRLLT--------------------------AARERNYGRSAVLERVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALEALADGAEVA------EDDELESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGL 468
            LE  R LHE+IE  +RL     H+ +   T   RLA  H   +C     + + DL  +   +  +  +  +  + A   +  S FY +L++ R+ HR    L +  V +D    L++     FSGEE  GR+LDL    R+F N   +P+ G + + Y  ++    D F S+P   + ++ Y+AYL  L +YL  F  R+ PL    A L+   ++     +            GA +      P    L        LE +  D++++ LV  GLK GG    +A+RL+                           A R  +  ++  L      AL  L+    + T   V+K+   +Y E+ A+   L+    G +        EDDE ++ IYNP ++P+G+DGKPIPYW+YKLHGLN EF+CEICGN +Y G RAFE+HF + +H+ G++ LGI  SK +  VTKID+A  L + M K      F +D + EFED +GNV N+KTY DL RQGL
Sbjct:    6 LERTRALHEEIERSERLVAKDFHTDAKSHTS--RLAQNHRVFQCVDGIRKRSRDLLTIYDDEDGSRKDELEG-MAAENQEVYSLFYERLKEARDYHRRHPDLELASVDKDEEEFLKSRPRVDFSGEEAQGRFLDLHDVHRSFTN---APKFGNKDLSYLDFLGMFCD-FRSIPKPSKLNQEYKAYLEDLDEYLVGFYGRSQPLASLGAPLAAVEKEFDEMWERGEVEDWEDKGLGASTSQVKDNPKLIDLEDFESAGDLEAVGGDRIKEALVALGLKAGGSLSQKAERLMATKGKALEELDRKLFAKGKKPVRNAEEAQRRLSLSKAIALLECRIRALMQLMEKTLSDTKKQVEKKATSTYEELVADMEELQDRGQGDDQGGDGTDNEDDENDNIIYNPLNIPVGFDGKPIPYWLYKLHGLNQEFKCEICGNFSYWGRRAFEKHFNEARHLHGMKCLGIPNSKIFSEVTKIDEAYALWENMKKKNSAVGFTQDEDEEFEDADGNVYNKKTYIDLQRQGL 517          
BLAST of Gvermi5594.t1 vs. uniprot
Match: D8TLN4_VOLCA (Splicing factor 3a, subunit 3 n=2 Tax=Volvox TaxID=3066 RepID=D8TLN4_VOLCA)

HSP 1 Score: 243 bits (620), Expect = 1.400e-68
Identity = 164/429 (38.23%), Postives = 227/429 (52.91%), Query Frame = 0
Query:   86 SSFYSQLRDLREAHRARLPVTPV-SRDAALILQAYNPPAFSGEECDGRYLDLLQHFRTFLNLRKSPERGTQSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSHM---------DGALSEIAASYPTYE-------QLLERLSADQLRDRLVQFGLKCGGRPQDRAKRL-------LTAARERNYGRSAVLERVLTFALNTLLAPER--------------------AATVANVQKRLALSYPEIEAERRALEALADGAEVA--EDDELESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGL 468
            S FY +L+++RE HR  L      + D  L+L+      F+GEE  GRYLD+   +  FLNL+   +R     EYY+Y+     DFS++P   +  + Y  YL AL  YL  F  R  PL +    L+   +D  +           D  +  +A S    E       + LE L AD+L++ L   GLKCGG  ++RA RL       L+    +++ +  V       A N+  A  R                    A T   V+K+ A +Y E++AE    EA     EVA  EDDE +  +YNP  LPLGWDGKPIPYW+YKLHGLN EF+CEICGN +Y G RA+E+HF + +H+ G+R LGI  +K +  VTKI+DAL+L   + K++    F  ++E EFED  GNV ++KTY DL RQGL
Sbjct:   84 SKFYDRLKEIREYHRKFLSNDLTEAEDDTLLLKEEPHVDFTGEEGLGRYLDMHDLYLRFLNLQSLQQRSKG--EYYEYLTSF-SDFSAMPRQQKMGKQYSEYLAALLGYLCSFYERTQPLAQLQRMLNTVEKDFSARWEQGQIAGWEDRGVGNVAPSTSGIELEAFSSAEELEILGADRLKEALTSLGLKCGGTTKERAARLWLTRDTPLSQLDRKHFAKGVVPPSDSDVATNSKAAHARHVALLEVEIRKMAELLVNVIADTKGKVEKKQAQTYEEMQAELAEAEA-----EVAAPEDDEEDEFVYNPLKLPLGWDGKPIPYWLYKLHGLNQEFKCEICGNYSYWGRRAYEKHFKEYRHLNGMRALGIPNNKMFYEVTKIEDALQLWKSIQKAK--GDFKPEDE-EFEDAQGNVYSKKTYDDLKRQGL 501          
BLAST of Gvermi5594.t1 vs. uniprot
Match: A0A0M0JHJ6_9EUKA (Splicing factor 3a subunit 3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JHJ6_9EUKA)

HSP 1 Score: 243 bits (619), Expect = 6.070e-68
Identity = 194/553 (35.08%), Postives = 255/553 (46.11%), Query Frame = 0
Query:    4 LETLRQLHEDIEILQRLAVAALHSRSTPSTPHHRLATVHPPLRCARDAEQL-AADLAALAA----SKAATLLESYQTPLPAPPADPLSSFYSQLRDLREAHRARLPVTPVSRDA-----ALILQAYNPPAFSGEECDGRYLDLLQHFRTFLNLRKSPERGTQSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSH-MDGALSEIAASYPT--------------------YEQL--LERLSADQLRDRLVQFGLKCGGRPQDRAKRLL--------------------------------------------------TAARERNYGRSAVLERVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALEALADGAEVAED---DELESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGLAD 470
            LE  R LHED+E+L+R     L   S               +    +A Q  +A L AL A    ++   L    Q       A   ++FY+QLR +RE HR + P  P +  A     A +L+A     F+GEE +GRY+D+      +LNL+     G + ++Y  Y++Q     ++LP    TS  Y  Y   L DYL  F RR  PL   +  +  A  D      +GA++   +S PT                    Y+    LE L  + L+  L + GLKCGG  Q RA+RL                                                   TAA  R     A+LE ++   L  LLA     +   V+K+ A +Y EIE +   L A  D  EV ED   D  E  IYNP +LPLGWDGKPIPYW+YKLHGLN EF+CEICGN +Y GPR FERHF + +H  G++ LGI  SK +  +T I+DA  L  K    +    F  D E EFEDG+GNVM RK Y DL RQGL D
Sbjct:    6 LERGRGLHEDLEVLERAMYRELGDPSAGKLKRADQNARDQVVATLLNAHQSRSAQLGALYADADGARKEELASMTQRSAEGSMAPVFTTFYNQLRSVREYHR-KFPSAPSTESAETTLIAAVLEAAPEVGFTGEEAEGRYVDMHALHEAYLNLK-----GCERIDYCTYLKQ-CSHLAALPKTTATSGAYARYSRDLRDYLLGFLRRTQPLMPLNKLIEAAEADFEQRWQNGAVTRWQSSPPTEAAPAPAAVAASSATLDLGTYDSAAALEALGLEVLKHELTRRGLKCGGTLQQRAERLYLAKTTPLAAMPKIHLAKPTPPPAPHANGAASGSASDXXXXXXXXXSDAAGTAAAARGARAVALLEELVA-RLGELLADVLEESAMMVEKKQARTYDEIERDLM-LAAQEDAMEVDEDEDEDAEEKPIYNPLNLPLGWDGKPIPYWLYKLHGLNLEFKCEICGNYSYWGPRPFERHFQEWRHAYGMKCLGIPNSKPFQGITLIEDAYTLWAKHKAEKGTTAFQADTEEEFEDGSGNVMTRKVYTDLARQGLLD 549          
BLAST of Gvermi5594.t1 vs. uniprot
Match: A0A061SF95_9CHLO (Splicing factor 3A subunit 3 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SF95_9CHLO)

HSP 1 Score: 239 bits (610), Expect = 3.920e-67
Identity = 186/517 (35.98%), Postives = 249/517 (48.16%), Query Frame = 0
Query:    4 LETLRQLHEDIEILQRLAVAALHSRSTPSTPHHRLATVHPPLRCARDAEQLAADLAALAASKAATLLESYQTPLPAPPADPLSSFYSQLRDLREAHRARLP---VTPVSRDAALILQAYNPPA-FSGEECDGRYLDLLQHFRTFLNLRKSPERGTQSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARRAHPLDRTDAHLSKAREDACSHMD------------------GALSEIAASYPTYEQLLERLSADQLRDRLVQFGLKCGGRPQDRAKRLLTAA------------------------RERNYGRSAVLE------RVLTFALNTLLAPERAATVANVQKRLALSYPEIEAERRALEALADGAEVAEDDELESTIYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDGNGNVMNRKTYHDLLRQGL 468
            LE  R  HE++E L+RL V AL + +   T   +L+  H   +     +  +A LA +         E   +       +  S FY +L++ RE H+ R P   +T    D  L L  YN    FSGEE  GR LDL    + +LN      +  + ++Y  Y+  ++ +FS +P  +R SRPY  YL AL  YL DF  R  PL   D  L K  ++     D                   A S+I        + L  L  D+L+D L   GLK GG  + RA+RL+                           +ER   R+A  +      RVL      +L      TVANV+K+ A +Y E++ E    +          +DE    IYNP  LPLGWDGKPIPYW+YKLHGLN EF+CEICGNA+Y G RAFERHF + +HV G+R LGI  +K +  VTKIDDAL LH  + + Q       D E EFED  GNV ++KT+ D  RQGL
Sbjct:    6 LEQARGSHEEVERLERLIVKALKNEAR--THKEKLSQNHKVRKILDVMQDKSAKLAKIYHDDDNARKEEINSMAG---ENVFSIFYDKLKETREYHK-RYPSYDITEAENDEEL-LSLYNTHVEFSGEEASGRCLDLHHLHQIYLN-----SKFGKKIDYITYIN-NLSNFSEIPRQLRLSRPYRDYLGALLAYLGDFYNRTQPLGGKDRELKKFDQEFDEKFDKGEIAGWEDRGEGKISGGDASSQIDLEAFESAEELATLGPDRLKDALQSLGLKAGGTLEQRAERLMMTKGKPLESLDRKLFAKGSAPAAALPEQEREKQRAAARQSARLEGRVLLVV--QMLGSVIDDTVANVEKKQARTYDELQVELEEAQXXXXXXXXXXEDEY---IYNPLKLPLGWDGKPIPYWLYKLHGLNQEFKCEICGNASYWGRRAFERHFKEWRHVNGMRALGIPNNKNFYEVTKIDDALALHKTLLERQSAGT--RDLEEEFEDAQGNVYDKKTFEDFKRQGL 502          
The following BLAST results are available for this feature:
BLAST of Gvermi5594.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJN0_9FLOR2.560e-20966.60Splicing factor SF3a60-like n=1 Tax=Gracilariopsis... [more]
R7Q5E3_CHOCR5.940e-15552.08Matrin-type domain-containing protein n=1 Tax=Chon... [more]
A0A7S2ZB02_9RHOD1.270e-8142.54Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
UPI001E1D80042.040e-7547.55splicing factor 3A subunit 3-like n=1 Tax=Mercenar... [more]
M2Y7A7_GALSU1.090e-7335.33Splicing factor 3A subunit 3 isoform 2 n=2 Tax=Gal... [more]
A0A7S3F495_9EUKA1.570e-6936.59Hypothetical protein n=2 Tax=Haptolina ericina Tax... [more]
A0A5B8MTJ1_9CHLO3.990e-6932.95Subunit 3 of splicing factor 3A n=4 Tax=Chloropico... [more]
D8TLN4_VOLCA1.400e-6838.23Splicing factor 3a, subunit 3 n=2 Tax=Volvox TaxID... [more]
A0A0M0JHJ6_9EUKA6.070e-6835.08Splicing factor 3a subunit 3 n=1 Tax=Chrysochromul... [more]
A0A061SF95_9CHLO3.920e-6735.98Splicing factor 3A subunit 3 n=2 Tax=Tetraselmis s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..339
NoneNo IPR availablePFAMPF13297SDE2_2Ccoord: 239..271
e-value: 2.1E-7
score: 30.7
NoneNo IPR availablePANTHERPTHR12786SPLICING FACTOR SF3A-RELATEDcoord: 4..468
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 573..642
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 461..585
e-value: 3.2E-31
score: 109.6
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 469..576
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 470..546
e-value: 4.8E-15
score: 55.3
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 463..568
score: 23.805252
IPR031774SF3A3 domainPFAMPF16837SF3A3coord: 124..176
e-value: 2.2E-10
score: 40.5
IPR024598Splicing factor SF3a60 /Prp9 subunit, C-terminalPFAMPF11931SF3a60_Prp9_Ccoord: 350..468
e-value: 1.6E-48
score: 164.2
IPR031776Splicing factor 3A subunit 3PANTHERPTHR12786:SF2SPLICING FACTOR 3A SUBUNIT 3coord: 4..468
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 374..405
score: 8.850671

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:678678..684145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5594.t1Gvermi5594.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 678678..684145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5594.t1 ID=Gvermi5594.t1|Name=Gvermi5594.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=729bp
MGDLETLRQLHEDIEILQRLAVAALHSRSTPSTPHHRLATVHPPLRCARD
AEQLAADLAALAASKAATLLESYQTPLPAPPADPLSSFYSQLRDLREAHR
ARLPVTPVSRDAALILQAYNPPAFSGEECDGRYLDLLQHFRTFLNLRKSP
ERGTQSVEYYQYVRQHVDDFSSLPPAVRTSRPYEAYLTALHDYLADFARR
AHPLDRTDAHLSKAREDACSHMDGALSEIAASYPTYEQLLERLSADQLRD
RLVQFGLKCGGRPQDRAKRLLTAARERNYGRSAVLERVLTFALNTLLAPE
RAATVANVQKRLALSYPEIEAERRALEALADGAEVAEDDELESTIYNPKD
LPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHV
QGLRRLGIGYSKAYMMVTKIDDALKLHDKMNKSQQEAQFDEDNEMEFEDG
NGNVMNRKTYHDLLRQGLADLHTKRPNALQVLGTDIVVWRARRSDDWTVF
RDRCPHRFAALSEGRINRATARLECGYHGWQFNSKGECSLIPQSQKPPSD
LLCATSLPSTVRSGMLFVWMGSCQPPADSFPSFVDDVRAKYITSSYSRVL
PLCFTTLIQNVLDPAHIHFAHHGQIGRRDLAAPIPVRILKHHTIEGFTAD
YYGGSGTEKHLKGTEKHVKGTEKHVKGTEKHVKGTEKHLKGTEKHLKEQS
SLLVFPLMKGFHITSSKLEHHRHGPVTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S
IPR031774SF3A3_dom
IPR024598SF3a60/Prp9_C
IPR031776SF3A3
IPR000690Matrin/U1-C_Znf_C2H2