Gvermi5580.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5580.t1
Unique Name	Gvermi5580.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	418

Homology

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BLAST of Gvermi5580.t1 vs. uniprot
Match: A0A2V3IX79_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX79_9FLOR)

HSP 1 Score: 226 bits (576), Expect = 4.410e-62
Identity = 163/409 (39.85%), Postives = 222/409 (54.28%), Query Frame = 0

Query:    2 LPGVISRLCALLSDAQLLHGSLLLDVFRVLALFVDVLDVN---PLLSN-ASPPSFSHALRLRRQRHMQPADAXXXXXXXXXXXXXXXXXXHPTDXXXXXXXXDAAAAPVLTNITRDQEWVSHASARFSMHLLRTVHSPRAPLSHARPDVRVAFANLIASVLSLRAFRRSDQLFISFSLSLLVLSADRFQLVARSAAHAVRLLAASAPEVCHSLLTVFRAIAVRYAPHQHPAQPSHSSYNAVNHFLSFDDHRLHMCVHGMLANLFPLRHQDSVLELRRLPSFLSSLGHATFSAMLCSLHQQLFVAPPIPSAPPLDAQNYSNISSEAAFRMGKAQCMYTIMPQLLHLSATAASFEQKAHCTLVLSALLRGALTTASSLDVLDAAEELFTVLNQFFLPAFDDSSSTALQASD 406
            LPGV S LCA L +A   H SL     ++L++F+ VL+V+   P++++ +S  SFS ALR RR     P +A                   P+D        DA+ + +   +TRD  W+       +  LLR VH+P  PLSH+ P  RVAFA      L +       +L  +  LSLL+L ADRF  V+      V  L  +  E+ +  L  FRA+    A + HPA+      + V  F+SFD+ RL  C+H +   LFP      +LE RRL SF++SLG  TF+ MLCSL ++L+V P IP  P    Q+  N++ EAAFR G+  CMYT+MPQLL L+  A  FE KAHC L+L AL+RGAL +A   DVL    ELF +LN F +PAFD S + +  ASD
Sbjct:  166 LPGVASSLCAFLRNAASSHSSLTPRALQLLSVFLPVLNVHHSSPVVASPSSQTSFSDALRRRRA----PTEAPCRTH-------------QPSDLP------DASRSLL---VTRDSAWLDATVPALTAQLLRIVHTPAGPLSHSSPACRVAFAIFARDCLYIPPLFEVVRLRNALILSLLMLRADRFDDVSSQTNSIVSQLVPTR-ELLNVFLHAFRAL----ANNSHPARVCPED-DVVQRFVSFDEQRLQKCLHAVFVLLFPPNASQPLLEQRRLASFITSLGPNTFANMLCSLFRRLYVYPAIPPDPHHVRQSCCNVACEAAFRAGQTSCMYTLMPQLLVLAEEAVKFEDKAHCALLLCALMRGALVSARDPDVLRLVGELFELLNHFLVPAFDYSDAQSEHASD 542

The following BLAST results are available for this feature:

BLAST of Gvermi5580.t1 vs. uniprot

BLAST of Gvermi5580.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IX79_9FLOR	4.410e-62	39.85	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..87

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_776	contig	ScGOVlb_776:637527..638904 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5580.t1	Gvermi5580.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_776 637527..638904 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5580.t1 ID=Gvermi5580.t1|Name=Gvermi5580.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=418bp
MLPGVISRLCALLSDAQLLHGSLLLDVFRVLALFVDVLDVNPLLSNASPP
SFSHALRLRRQRHMQPADAQPAHREAAHPEPTHSEPTHPTDPTHPTNPTD
AAAAPVLTNITRDQEWVSHASARFSMHLLRTVHSPRAPLSHARPDVRVAF
ANLIASVLSLRAFRRSDQLFISFSLSLLVLSADRFQLVARSAAHAVRLLA
ASAPEVCHSLLTVFRAIAVRYAPHQHPAQPSHSSYNAVNHFLSFDDHRLH
MCVHGMLANLFPLRHQDSVLELRRLPSFLSSLGHATFSAMLCSLHQQLFV
APPIPSAPPLDAQNYSNISSEAAFRMGKAQCMYTIMPQLLHLSATAASFE
QKAHCTLVLSALLRGALTTASSLDVLDAAEELFTVLNQFFLPAFDDSSST
ALQASDPFYVMPHMANI*