Gvermi5568.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5568.t1
Unique NameGvermi5568.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length106
Homology
BLAST of Gvermi5568.t1 vs. uniprot
Match: R7Q968_CHOCR (60S ribosomal protein L44 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7Q968_CHOCR)

HSP 1 Score: 195 bits (495), Expect = 9.140e-63
Identity = 96/104 (92.31%), Postives = 99/104 (95.19%), Query Frame = 0
Query:    2 VVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAATY 105
            VVVPKSRKTLCI  +CKKH LHKVTQYKKGKDSLYAQGKRRYD KQ+GFGGQTKPVFHKKAKTTKKIVLRLECT CGFKQQRV+KRCKHFELGDQKKTKGAATY
Sbjct:   13 VVVPKSRKTLCISKECKKHQLHKVTQYKKGKDSLYAQGKRRYDAKQAGFGGQTKPVFHKKAKTTKKIVLRLECTACGFKQQRVLKRCKHFELGDQKKTKGAATY 116          
BLAST of Gvermi5568.t1 vs. uniprot
Match: A0A7S0T657_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T657_9RHOD)

HSP 1 Score: 177 bits (448), Expect = 9.490e-56
Identity = 85/105 (80.95%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAATY 105
            MVV+PKSR T C G +CKKHTLHKVTQYK GK SL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKKIVLRLEC QC +K  +V+KRCKHFELGDQKK+KG A Y
Sbjct:    1 MVVIPKSRNTFCAGKECKKHTLHKVTQYKTGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLECIQCKYKSHKVLKRCKHFELGDQKKSKGGAVY 105          
BLAST of Gvermi5568.t1 vs. uniprot
Match: A0A1Y3MWI1_PIRSE (Uncharacterized protein n=7 Tax=Opisthokonta TaxID=33154 RepID=A0A1Y3MWI1_PIRSE)

HSP 1 Score: 176 bits (446), Expect = 1.980e-55
Identity = 87/103 (84.47%), Postives = 93/103 (90.29%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAA 103
            MV +PK+RKT C G KC+KHTLHKVTQYK GK SL+AQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQC +KQQ  IKRCKHFELG +KKTKGAA
Sbjct:    1 MVNIPKTRKTFCKGKKCRKHTLHKVTQYKTGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCKYKQQLAIKRCKHFELGGEKKTKGAA 103          
BLAST of Gvermi5568.t1 vs. uniprot
Match: A0A5J4Z0F7_PORPP (60S ribosomal protein L44 Q n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0F7_PORPP)

HSP 1 Score: 177 bits (449), Expect = 5.620e-55
Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAATY 105
            MVV+PK+RKT C G +CKKHTLHKV+QYK GK SLYAQGKRRYDRKQSG+GGQTKPVFHKKAKTTKKIVLRLECT C +K   V+KRCKHFELGDQKKTKG A Y
Sbjct:   68 MVVIPKTRKTFCPGKECKKHTLHKVSQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLECTACKYKHHAVLKRCKHFELGDQKKTKGGAVY 172          
BLAST of Gvermi5568.t1 vs. uniprot
Match: A0A1X6P8J5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8J5_PORUM)

HSP 1 Score: 172 bits (436), Expect = 6.420e-54
Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAATY 105
            MVVVPKSRKT C   +C+KHTLHKVTQYK GK SL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLECT C +K  + + RCKHFELGDQKKTKG AT+
Sbjct:    1 MVVVPKSRKTFCPAKECRKHTLHKVTQYKTGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTLCKYKSHKTLARCKHFELGDQKKTKGVATF 105          
BLAST of Gvermi5568.t1 vs. uniprot
Match: A0A6A4H067_9AGAR (60S ribosomal protein L44 n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4H067_9AGAR)

HSP 1 Score: 171 bits (433), Expect = 6.120e-53
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAA 103
            MV VPK+R+T C G  C+KHT HKVTQYKKGKDSL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLECT C +K Q V+KRCKHFELG +KKTKGAA
Sbjct:   38 MVNVPKTRRTYCKGKTCRKHTAHKVTQYKKGKDSLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQMVLKRCKHFELGGEKKTKGAA 140          
BLAST of Gvermi5568.t1 vs. uniprot
Match: UPI0004449F2F (60S ribosomal protein L44 n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449F2F)

HSP 1 Score: 169 bits (429), Expect = 7.730e-53
Identity = 82/103 (79.61%), Postives = 90/103 (87.38%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAA 103
            MV +PK+R+T C G KCKKHT HKVTQYKKGKDSL AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLEC  C +K Q  +KRCKHFELG +KKTKGAA
Sbjct:    1 MVNIPKTRRTYCAGKKCKKHTAHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVDCKYKMQMSLKRCKHFELGGEKKTKGAA 103          
BLAST of Gvermi5568.t1 vs. uniprot
Match: A0A067QC38_9AGAM (60S ribosomal protein L44 n=5 Tax=Agaricomycetidae TaxID=452333 RepID=A0A067QC38_9AGAM)

HSP 1 Score: 168 bits (426), Expect = 2.220e-52
Identity = 82/103 (79.61%), Postives = 91/103 (88.35%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAA 103
            MV +PK+R+T C G  CKKHT HKVTQYKKGKDSL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLECT C +K Q  +KRCKHFELG +KKTKGAA
Sbjct:    1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQLSLKRCKHFELGGEKKTKGAA 103          
BLAST of Gvermi5568.t1 vs. uniprot
Match: A0A0D0E233_9AGAM (60S ribosomal protein L44 n=3 Tax=Agaricomycetidae TaxID=452333 RepID=A0A0D0E233_9AGAM)

HSP 1 Score: 168 bits (426), Expect = 3.130e-52
Identity = 82/103 (79.61%), Postives = 91/103 (88.35%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAA 103
            MV +PK+R+T C G  CKKHT HKVTQYKKGKDSL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLECT C +K Q  +KRCKHFELG +KKTKGAA
Sbjct:    1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQLSLKRCKHFELGGEKKTKGAA 103          
BLAST of Gvermi5568.t1 vs. uniprot
Match: A0A8H4ELT8_GIGMA (60S ribosomal protein L44 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A8H4ELT8_GIGMA)

HSP 1 Score: 169 bits (428), Expect = 4.270e-52
Identity = 84/103 (81.55%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGAA 103
            MV VPK+R T C G  C+KHTLHKV+QYKKGKDSLYAQGKRRYDRKQSG+GGQTKPVFHKKAKTTKKIVLRLEC  C +K Q  IKRCKHFELG  KKTKGAA
Sbjct:   44 MVNVPKTRNTYCKGKNCRKHTLHKVSQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLECQSCKYKHQVAIKRCKHFELGGDKKTKGAA 146          
The following BLAST results are available for this feature:
BLAST of Gvermi5568.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q968_CHOCR9.140e-6392.3160S ribosomal protein L44 n=2 Tax=Rhodymeniophycid... [more]
A0A7S0T657_9RHOD9.490e-5680.95Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A1Y3MWI1_PIRSE1.980e-5584.47Uncharacterized protein n=7 Tax=Opisthokonta TaxID... [more]
A0A5J4Z0F7_PORPP5.620e-5581.9060S ribosomal protein L44 Q n=1 Tax=Porphyridium p... [more]
A0A1X6P8J5_PORUM6.420e-5479.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A6A4H067_9AGAR6.120e-5380.5860S ribosomal protein L44 n=1 Tax=Gymnopus androsa... [more]
UPI0004449F2F7.730e-5379.6160S ribosomal protein L44 n=1 Tax=Stereum hirsutum... [more]
A0A067QC38_9AGAM2.220e-5279.6160S ribosomal protein L44 n=5 Tax=Agaricomycetidae... [more]
A0A0D0E233_9AGAM3.130e-5279.6160S ribosomal protein L44 n=3 Tax=Agaricomycetidae... [more]
A0A8H4ELT8_GIGMA4.270e-5281.5560S ribosomal protein L44 n=2 Tax=Gigaspora TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.80coord: 1..105
e-value: 7.3E-46
score: 157.0
NoneNo IPR availablePANTHERPTHR10369:SF3860S RIBOSOMAL PROTEIN L44-LIKEcoord: 2..103
IPR000552Ribosomal protein L44ePFAMPF00935Ribosomal_L44coord: 19..94
e-value: 8.5E-35
score: 119.0
IPR000552Ribosomal protein L44ePANTHERPTHR1036960S RIBOSOMAL PROTEIN L36A/L44coord: 2..103
IPR000552Ribosomal protein L44ePROSITEPS01172RIBOSOMAL_L44Ecoord: 63..74
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 3..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:595334..595837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5568.t1Gvermi5568.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 595334..595837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5568.t1 ID=Gvermi5568.t1|Name=Gvermi5568.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=106bp
MVVVPKSRKTLCIGAKCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGF
GGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTK
GAATY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000552Ribosomal_L44e
IPR011332Ribosomal_zn-bd