Gvermi5422.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5422.t1
Unique Name	Gvermi5422.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	319

Homology

[Close]

BLAST of Gvermi5422.t1 vs. uniprot
Match: A0A2V3IWB2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWB2_9FLOR)

HSP 1 Score: 349 bits (895), Expect = 1.820e-117
Identity = 186/293 (63.48%), Postives = 220/293 (75.09%), Query Frame = 0

Query:   25 LSSLNTVATQAESSFRSLSEWEHTAFRQIRRSGSMSRPPENRHQLAPSRSLPDSSDTSFSSATDLPISHAHQPHNVVLIGHSRAIMINLAHRLISTFPPPPTSSPHYPPTKSTVFINGQLLRLVLIECPPQASAPDIAARVQRQVPRLVLLCADFYNMASFESVVRLDMDILDYLNLACIWVLMKSSSKRSRLSNFVDDTDVSAANHFLSSPRRCFVIAVDGIQWSVNLKKLGMFIHRFANDASRAPQSPAFVAQRRFSISKSRSLFCLSVHRSSDKTRQPRTRSNRFLRWLW 317
            +SSLN +ATQAESSFRSL++WEH AFRQ+R +GS+   P+  H      S      +SFSSA DLP  +  Q  N+VLIGH+R IM++LAHRL STF PP ++      TKS ++INGQL+RLVLIECPP  +APDIAARVQRQ P+LVLLCADFYNM+SFE VVRLDMDILDYLN++CIWVLMK+++KR    N VDDTDVSAANHFLSSPRRCFV+ VDGIQ SVNLKKLGM IHR A+   RA Q+  F  Q R S++KS S FCL+VHRS+ KT     R  R  RWLW
Sbjct:    1 MSSLN-IATQAESSFRSLTQWEHHAFRQLRETGSLHTIPD--HPDEHPSSXXXXXXSSFSSAIDLPNYNPQQLQNIVLIGHTRTIMLHLAHRLTSTFAPPASTDGDLHRTKSILYINGQLIRLVLIECPPNTAAPDIAARVQRQSPKLVLLCADFYNMSSFELVVRLDMDILDYLNISCIWVLMKTTTKRRCSYNCVDDTDVSAANHFLSSPRRCFVVTVDGIQRSVNLKKLGMCIHRSASGPPRASQAHTFTGQFRLSVAKSLSSFCLAVHRSNQKTSTTPNRQTRLPRWLW 290

The following BLAST results are available for this feature:

BLAST of Gvermi5422.t1 vs. uniprot

BLAST of Gvermi5422.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IWB2_9FLOR	1.820e-117	63.48	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24228	contig	ScGOVlb_24228:1793315..1794271 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5422.t1	Gvermi5422.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24228 1793315..1794271 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5422.t1 ID=Gvermi5422.t1|Name=Gvermi5422.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=319bp
MPIIPRPPPRSSSPAPSTRPRATSLSSLNTVATQAESSFRSLSEWEHTAF
RQIRRSGSMSRPPENRHQLAPSRSLPDSSDTSFSSATDLPISHAHQPHNV
VLIGHSRAIMINLAHRLISTFPPPPTSSPHYPPTKSTVFINGQLLRLVLI
ECPPQASAPDIAARVQRQVPRLVLLCADFYNMASFESVVRLDMDILDYLN
LACIWVLMKSSSKRSRLSNFVDDTDVSAANHFLSSPRRCFVIAVDGIQWS
VNLKKLGMFIHRFANDASRAPQSPAFVAQRRFSISKSRSLFCLSVHRSSD
KTRQPRTRSNRFLRWLWH*