Gvermi5372.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5372.t1
Unique NameGvermi5372.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length252
Homology
BLAST of Gvermi5372.t1 vs. uniprot
Match: A0A2V3IZ50_9FLOR (Ribosome maturation protein SBDS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ50_9FLOR)

HSP 1 Score: 427 bits (1097), Expect = 6.210e-150
Identity = 218/251 (86.85%), Postives = 235/251 (93.63%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEPDYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQLT 251
            MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIF+NVSKGILAKTKDLKDAFKTE+ + IVLEILRKGELQVSERERQYQT+NL NEIA IV+EKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNK AKVQAQIVIK+LQ HM ISRAQMRLQL++P +RAKAVKE+LK HV  WE EEWE DY G +LIDPGSFR+IDDVLR+ET+GQG FDVL++AVV+DNDEQLT
Sbjct:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFTNVSKGILAKTKDLKDAFKTEDIERIVLEILRKGELQVSERERQYQTENLSNEIARIVSEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKTAKVQAQIVIKQLQEHMSISRAQMRLQLNLPSARAKAVKEQLKTHVNKWEQEEWEMDYVGTVLIDPGSFRVIDDVLRQETRGQGTFDVLSVAVVDDNDEQLT 251          
BLAST of Gvermi5372.t1 vs. uniprot
Match: R7QJF2_CHOCR (Ribosome maturation protein SBDS n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJF2_CHOCR)

HSP 1 Score: 384 bits (987), Expect = 3.530e-133
Identity = 188/250 (75.20%), Postives = 224/250 (89.60%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEPDYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL 250
            MSLKQPV+QVRLTN+AVVRLKR+GKRFELACYKNKV+SWR+GNE DLD+VLQT+S+F+NVSKG+LAK KDL DAFKTE+   IVLEIL+KGELQVS RERQYQ +NL+NEIA IV+EKCVDP+T RPFSVG+IERAM+DT+HYAVLPNK AKVQAQ VIK+LQ HM ISRAQMRLQ+S+P S+ KAV+EKL+ HV+ WE EEW+PD++  +L+DPG FRIID+ LRE T+GQ  F+VL++AVVEDNDEQL
Sbjct:    1 MSLKQPVSQVRLTNVAVVRLKRRGKRFELACYKNKVISWREGNEDDLDEVLQTSSVFTNVSKGVLAKKKDLVDAFKTEDEGAIVLEILKKGELQVSGRERQYQAENLFNEIAVIVSEKCVDPSTKRPFSVGIIERAMRDTIHYAVLPNKTAKVQAQSVIKQLQEHMSISRAQMRLQISVPSSKGKAVREKLREHVQQWEQEEWDPDFQATVLVDPGCFRIIDETLREATRGQATFEVLSLAVVEDNDEQL 250          
BLAST of Gvermi5372.t1 vs. uniprot
Match: A0A7S1TIB3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIB3_9RHOD)

HSP 1 Score: 314 bits (805), Expect = 3.100e-105
Identity = 156/251 (62.15%), Postives = 204/251 (81.27%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEPDY-EGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL 250
            MSLKQPV QVRLTN+AVVRL+RKG RFE+ACY+NKV+S+R G EKDLD+VLQ   +F+NVSKG+ A TK+LKDAF T +T+EI++EIL+KGELQVS++ER +Q D L++EIA IVA KCVD NTNRP  VG++ERAMKDT+HYAV+PNK+AK QA  VI++L+ HM I RAQMRLQ+++P   AK +KEKL   V  WE E+W+  Y +G+ LIDPG+FR ID+++  ETKGQG+ +V+N+A V + + +L
Sbjct:   17 MSLKQPVNQVRLTNVAVVRLRRKGHRFEVACYRNKVMSYRDGTEKDLDEVLQVEMVFTNVSKGVAAPTKELKDAFGTSDTREIIMEILKKGELQVSDKERNHQLDALFSEIAHIVASKCVDRNTNRPIPVGIVERAMKDTIHYAVVPNKSAKQQALEVIRQLKEHMEIDRAQMRLQVTLPGKSAKGLKEKLDDLVSKWEEEDWQSKYFDGVCLIDPGTFREIDELVSNETKGQGSVEVVNLAAVSEGEARL 267          
BLAST of Gvermi5372.t1 vs. uniprot
Match: A0A5J4YZP7_PORPP (Ribosome maturation protein SBDS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZP7_PORPP)

HSP 1 Score: 283 bits (723), Expect = 5.160e-93
Identity = 138/251 (54.98%), Postives = 194/251 (77.29%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEW-EPDYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL 250
            MS+ QPVTQVR+TN+ VVRLKRKG+RFELACY NKV+SWR+  EKDLD+VLQ   +F+NVSKG LA  K L  AF T++ ++I+++IL KGELQVSE+ER +Q+D L+ EIA++VA  CVDPNT RPF+VG+IER+MKD+LHYA  PNK+AK QA  VI++L+ H+ I RAQM + +++P   AK ++EKL+P+V + + E +    Y    LIDPG+FR ++D+++ +TKG G  ++ ++AV+ D +E+L
Sbjct:    1 MSVFQPVTQVRMTNVVVVRLKRKGQRFELACYPNKVISWREKTEKDLDEVLQIEQVFTNVSKGTLASQKQLVAAFGTDDVKDIIIQILEKGELQVSEKERHHQSDKLFQEIATLVAGMCVDPNTKRPFTVGMIERSMKDSLHYAAQPNKSAKQQALEVIRQLKEHIEIERAQMEIHITLPGKAAKQIREKLQPYVASLDDENFGAATYSATCLIDPGNFRTVEDIIKSQTKGAGTLEIASLAVMRDTEERL 251          
BLAST of Gvermi5372.t1 vs. uniprot
Match: UPI000A2A6623 (ribosome maturation protein SBDS-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6623)

HSP 1 Score: 281 bits (720), Expect = 1.250e-92
Identity = 145/247 (58.70%), Postives = 190/247 (76.92%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEPDYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDND 247
            MS+  P  QV+LTN+AVVRLK  GKRFE+ACYKNKV+SWR   EKDLD+VLQT +IF+NVSKG +AK +DLK AF TEN  EI  +IL KGELQVSE+ER  Q ++ + EIA++VA+KCV+P T RP+ VGVIERAMKD +HY+V+P ++ K QA  VI++L+  MPI RAQMRL+L +P   AK +KEKLKP +   + E+W+ D E + L+DPGS+R ID+V+R ETKG+G+ +VLN+  + D D
Sbjct:    1 MSIFTPTNQVKLTNVAVVRLKSCGKRFEIACYKNKVMSWRNNVEKDLDEVLQTDTIFTNVSKGQVAKNEDLKKAFGTENKTEICTKILSKGELQVSEKERNQQLESSFREIATVVADKCVNPETKRPYPVGVIERAMKD-IHYSVIPTRSTKQQALEVIRQLKETMPIERAQMRLKLILPSKDAKRIKEKLKPLLSTIDSEDWDMDLEIVCLVDPGSYRDIDEVIRVETKGRGSLEVLNLKDIHDAD 246          
BLAST of Gvermi5372.t1 vs. uniprot
Match: A0A7S0BCY2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BCY2_9RHOD)

HSP 1 Score: 278 bits (712), Expect = 2.410e-91
Identity = 141/251 (56.18%), Postives = 190/251 (75.70%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEPD-YEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL 250
            MSL QPV QVR+TN+AVVRLKRKGKRFE+ACYKNKVVSWR G+E DLD+V+Q  ++FSNVSKGI+A  KDL  AF TE+ Q+++L IL KGELQVSE+ERQ+ +D  + EIASI+A+ CVDP T RP+ V +IER M++TLHY VL N++AK QA  V+K+L+ HM I RA MR+ L+ P    K +KE +      +E+E +    YE   LIDPG FR ID+++++ TKGQG+ +++N+AV+++  E+L
Sbjct:    1 MSLFQPVGQVRMTNVAVVRLKRKGKRFEVACYKNKVVSWRSGSETDLDEVIQVENVFSNVSKGIVANKKDLVAAFGTEDVQKVILVILEKGELQVSEKERQHHSDKTFQEIASIIADNCVDPRTQRPYPVTMIERVMRETLHYTVLSNRSAKQQALDVVKQLKQHMEIQRALMRINLTAPSKFGKQLKESISSLTTEFENENFSGRFYEATFLIDPGRFREIDELVKQTTKGQGSIEIVNIAVIQEGQERL 251          
BLAST of Gvermi5372.t1 vs. uniprot
Match: UPI001B88E1FB (LOW QUALITY PROTEIN: ribosome maturation protein SBDS-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88E1FB)

HSP 1 Score: 275 bits (702), Expect = 7.200e-90
Identity = 139/250 (55.60%), Postives = 192/250 (76.80%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEPDYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL 250
            MS+  P  Q+RLTN+A+VR+K+ GKRFE+ACYKNKVVSWR   EKD+D+VLQT ++F+NVSKG ++K  DL  AF T++  EI  +IL KGELQVSERERQ Q ++ + +IA+IVA+KCV+P T RP++VG+IERAMKD +HYAV P + AK QA  VI+ L+ HMP+ RA+MR++L +P+  A+ ++EK+K  +   E E+W P+ E I LIDPG++R ID+++R ETKGQG  +VLN+  +E+ DE L
Sbjct:    1 MSIFTPTNQIRLTNVAIVRMKKGGKRFEIACYKNKVVSWRNKIEKDIDEVLQTHTVFTNVSKGQVSKRDDLVAAFGTDDQSEICKQILSKGELQVSERERQAQLESTFRDIATIVADKCVNPETKRPYTVGLIERAMKD-VHYAVKPTRNAKQQALDVIRLLKTHMPLERARMRMRLVLPVKEARRIREKIKSLLANIEQEDWTPNMEIICLIDPGAYREIDELVRSETKGQGTVEVLNLKDIEEGDESL 249          
BLAST of Gvermi5372.t1 vs. uniprot
Match: A0A2B4SEA6_STYPI (Ribosome maturation protein SBDS n=3 Tax=Scleractinia TaxID=6125 RepID=A0A2B4SEA6_STYPI)

HSP 1 Score: 275 bits (702), Expect = 7.690e-90
Identity = 141/251 (56.18%), Postives = 190/251 (75.70%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEP-DYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL 250
            MS+  P  QV+LTN+AVVRLK+ GKRFE+ACYKNKV+SWR   EKD+D+VLQT ++F NVSKG +AK  DL  AF T +  EI L+IL KGELQVSE+ER  Q ++++ +IA++VA+KCV+P T RP+ VG+IERAMKD +HY+V+P +  K QA  VIK+L+  M I RAQMRL+L IP   AK V+EKLKPH+   E E+W+  D E + LIDPG +RIID+ LR ET+G+G  +++++  +E+ DE+L
Sbjct:    1 MSIFTPTNQVKLTNVAVVRLKKSGKRFEIACYKNKVMSWRNKVEKDIDEVLQTHTVFMNVSKGQVAKNDDLSRAFGTTDQTEICLQILAKGELQVSEKERNTQLESMFRDIATVVADKCVNPETKRPYPVGLIERAMKD-IHYSVIPTRTTKQQALEVIKQLKESMEIERAQMRLRLIIPNREAKKVQEKLKPHISTVESEDWQGGDLEMVCLIDPGCYRIIDETLRAETRGRGTLEMISLKDIEEGDERL 250          
BLAST of Gvermi5372.t1 vs. uniprot
Match: A0A1X7V953_AMPQE (Ribosome maturation protein SBDS n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V953_AMPQE)

HSP 1 Score: 273 bits (699), Expect = 2.120e-89
Identity = 139/250 (55.60%), Postives = 192/250 (76.80%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEPDYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL 250
            MS+  P  Q+RLTN+A+VR+K+ GKRFE+ACYKNKVVSWR   EKD+D+VLQT ++F+NVSKG +AK  DL  AF TE+  EI   IL KGELQ+SERERQ Q ++L+ +I++IVA+KCV+P+T RP++VG+IERAMKD +HYAV P ++AK Q+  VI+ L++HMP+ RA+MRL+L +P+  A+ V+EK+   + + E E+W P  E + LIDPG FR ID+++R +TKG G  +VLN+  VE+ DE L
Sbjct:    1 MSIFTPTNQIRLTNVAIVRIKKGGKRFEIACYKNKVVSWRNKVEKDIDEVLQTHTVFNNVSKGQVAKRDDLASAFGTEDQTEICKTILSKGELQISERERQSQLESLFRDISTIVADKCVNPDTKRPYTVGMIERAMKD-VHYAVKPTRSAKQQSLDVIRLLKDHMPLERARMRLKLVLPVKEARKVREKIVGLLASVEQEDWRPQLEIVCLIDPGRFREIDEIVRGDTKGSGIVEVLNLKDVEEGDETL 249          
BLAST of Gvermi5372.t1 vs. uniprot
Match: A7RWI6_NEMVE (Ribosome maturation protein SBDS n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RWI6_NEMVE)

HSP 1 Score: 270 bits (691), Expect = 3.590e-88
Identity = 138/245 (56.33%), Postives = 190/245 (77.55%), Query Frame = 0
Query:    6 PVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERERQYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKAAKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEHEEWEPDYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL 250
            P  QV+LTN+AVVRLK+ GKRFE+ACYKNKV+SWR   EKD+D+VLQT ++F+NVSKG +AK +DL  AF T+N  +I L+IL KGELQVSE+ER  Q ++ + +IA+IVA+KCV+P T RP+ VGVIERAMKD +HY+V+P +++K QA  VI++L+ +M I RAQMRL+L +P   AK V+EKL+P +   E EEW+ D E + L+DPG +R ID+ LR ET+G+G  +VL++  V++ DE+L
Sbjct:    7 PTNQVKLTNVAVVRLKKSGKRFEIACYKNKVMSWRTNVEKDIDEVLQTHTVFTNVSKGQVAKNEDLVRAFGTDNQTDICLKILAKGELQVSEKERNQQLESSFRDIATIVADKCVNPETKRPYPVGVIERAMKD-IHYSVIPTRSSKQQALEVIRQLKENMQIDRAQMRLRLVLPGKDAKKVQEKLRPLMTKVESEEWDMDLEIVCLVDPGCYRSIDETLRAETRGRGNMEVLSLKDVQEGDERL 250          
The following BLAST results are available for this feature:
BLAST of Gvermi5372.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ50_9FLOR6.210e-15086.85Ribosome maturation protein SBDS n=1 Tax=Gracilari... [more]
R7QJF2_CHOCR3.530e-13375.20Ribosome maturation protein SBDS n=1 Tax=Chondrus ... [more]
A0A7S1TIB3_9RHOD3.100e-10562.15Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YZP7_PORPP5.160e-9354.98Ribosome maturation protein SBDS n=1 Tax=Porphyrid... [more]
UPI000A2A66231.250e-9258.70ribosome maturation protein SBDS-like n=1 Tax=Exai... [more]
A0A7S0BCY2_9RHOD2.410e-9156.18Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI001B88E1FB7.200e-9055.60LOW QUALITY PROTEIN: ribosome maturation protein S... [more]
A0A2B4SEA6_STYPI7.690e-9056.18Ribosome maturation protein SBDS n=3 Tax=Scleracti... [more]
A0A1X7V953_AMPQE2.120e-8955.60Ribosome maturation protein SBDS n=2 Tax=Amphimedo... [more]
A7RWI6_NEMVE3.590e-8856.33Ribosome maturation protein SBDS n=1 Tax=Nematoste... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019783Ribosome maturation protein Sdo1/SBDS, N-terminalPFAMPF01172SBDScoord: 14..100
e-value: 4.4E-30
score: 103.6
NoneNo IPR availableGENE3D3.30.70.240coord: 172..251
e-value: 5.2E-24
score: 86.0
NoneNo IPR availablePANTHERPTHR10927:SF1RIBOSOME MATURATION PROTEIN SBDScoord: 1..249
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyGENE3D3.30.1250.10coord: 1..94
e-value: 8.0E-38
score: 130.4
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilySUPERFAMILY89895FYSH domaincoord: 10..94
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilyGENE3D1.10.10.900coord: 98..171
e-value: 1.4E-26
score: 94.2
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilySUPERFAMILY109728Hypothetical protein AF0491, middle domaincoord: 89..163
IPR002140Ribosome maturation protein Sdo1/SBDSTIGRFAMTIGR00291TIGR00291coord: 9..233
e-value: 1.1E-52
score: 176.8
IPR018978Ribosome maturation protein Sdo1/SBDS, C-terminalPFAMPF09377SBDS_Ccoord: 108..225
e-value: 2.0E-30
score: 105.1
IPR039100Ribosome maturation protein Sdo1/SBDS-likePANTHERPTHR10927RIBOSOME MATURATION PROTEIN SBDScoord: 1..249
IPR018023Ribosome maturation protein SBDS, conserved sitePROSITEPS01267UPF0023coord: 44..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:1471358..1472205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5372.t1Gvermi5372.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 1471358..1472205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5372.t1 ID=Gvermi5372.t1|Name=Gvermi5372.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=252bp
MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDV
LQTTSIFSNVSKGILAKTKDLKDAFKTENTQEIVLEILRKGELQVSERER
QYQTDNLYNEIASIVAEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKA
AKVQAQIVIKELQNHMPISRAQMRLQLSIPLSRAKAVKEKLKPHVKAWEH
EEWEPDYEGIILIDPGSFRIIDDVLREETKGQGAFDVLNMAVVEDNDEQL
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019783Ribosome_mat_Sdo1/SBDS_N
IPR036786Ribosome_mat_SBDS_N_sf
IPR037188Sdo1/SBDS_central_sf
IPR002140Sdo1/SBDS
IPR018978Ribosome_mat_Sdo1/SBDS_C
IPR039100Sdo1/SBDS-like
IPR018023Ribosome_mat_SBDS_CS