Gvermi5336.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A2V3J6B5_9FLOR (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6B5_9FLOR) HSP 1 Score: 319 bits (817), Expect = 1.410e-102 Identity = 164/207 (79.23%), Postives = 187/207 (90.34%), Query Frame = 0
Query: 423 MVLNHEGGNVPIRDRARDELRECRSLVSNLFVAQAEMFKSVPTGNEEGKYVK---RDMTNESVQIMEKLVSQVQSFHSVIEQVLEHQRLNGIIEELRKANSVEDAKIAHLGANLRAAESVLQNALDDARPRLAAFKRANKRPVDVDDVIGYGSKISASLSAPAGWDPSQPLGNSLPPAPTEEMMRAGRLGAMDLELEKGGESSEKAR 626
MV ++ NVPIRDRARDELRECRSL+S+LFVAQA + KS+ T +++GK +K RD T ESVQIMEKLV+QV+SFHSV+EQVLEHQRL+GIIEELRKANSVEDAKIAHLGANLRAAESVLQN+LD+A+PRLAAFKRANKRP+DVD+VI YGSKISASLSAP GWDPSQPLGN LPPAPTEEMMRAG+LGA+++E EKG E SEKAR
Sbjct: 1 MVQHNHASNVPIRDRARDELRECRSLISSLFVAQANLLKSISTASDDGKRIKDTKRDPTQESVQIMEKLVTQVKSFHSVMEQVLEHQRLHGIIEELRKANSVEDAKIAHLGANLRAAESVLQNSLDEAKPRLAAFKRANKRPIDVDEVISYGSKISASLSAPLGWDPSQPLGNFLPPAPTEEMMRAGKLGAVEMEEEKGAELSEKAR 207
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A2V3J675_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J675_9FLOR) HSP 1 Score: 250 bits (638), Expect = 6.560e-72 Identity = 170/393 (43.26%), Postives = 214/393 (54.45%), Query Frame = 0
Query: 16 PHSFLPRKRRDHQPXXXXXXXXXXXXXXXXXXXXXXXSPPFSHSSANVTVADFVHAPPHRFADDSFPPEHKLTQPPPFDLFIA---AQRNSRHADSPTTVVTKPQYFGAVPYAPQPDAADQSSSDESAESIDSNVYVIDNSHHLSNLLNIV---APPKHXXXXXXXXXXXXXXSTPRRSFRVVPHSALPA--TAHISSDDTDLHEGHLEHLRFEDASSDQSASLSPELASERDEVSSTSITNMQPIFRPCAQFAHSHHLLPAPRLNE----RAKSETSTSSKSSIHPLS-ADACTVGLVESSDDLFRCASRCHSPLIRRVESWYSADDALHPGRNLLCQNPPSPAKYTFKPAHRRSSPHVSSPSSRLSLHAAVRTFSAQRHTEPINPQLSAQQ 395
PH F RKRR H P PP+SH V+VADFV P RFA+ + P + +PP +DLF A A+ N +H+ +P+ VVT P++FGA+PY S+SD +++S+DS VY IDN+ H+S LL I+ P H TP +S ++ + T SD+TDL+EGHLEH RF+DAS D S E SERDEVSSTSITN +P + +S L RL A S +S S SSI P S +D CTV VESSD +FR SRC SPLI VES+YS +A RNL+CQNP SP KYTFKP SSP VS SR + V F+A+RHTEPI+P+LS Q
Sbjct: 7 PHPFHARKRRSHPPLSSPSHHSERQPPIEYR-------PPYSH----VSVADFVDVPSQRFAERALSPTDNVKRPPSYDLFRAKQAARNNQKHSQTPSAVVTNPRHFGALPYVTAHPDNTGSTSDSASDSLDSTVYYIDNNSHVSALLAIINSATQPNHRHSLPNIPPSFQQSCTPHQSNISTSDKSVSSRPTDEPPSDETDLYEGHLEHARFQDASDDDHQLRSKERISERDEVSSTSITNFEPYSQSTHPLHNSQPLAAERRLRYSHLGHATSASSLLSDSSIRPASLSDVCTVRSVESSDGIFRAHSRCSSPLITPVESFYSVHEAFQKSRNLMCQNPVSPTKYTFKPPQTPSSPSVSPAHSRHT----VPLFTAERHTEPISPKLSTPQ 384
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A7S0BGG5_9RHOD (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGG5_9RHOD) HSP 1 Score: 119 bits (297), Expect = 2.580e-27 Identity = 72/186 (38.71%), Postives = 109/186 (58.60%), Query Frame = 0
Query: 432 VPIRDRARDELRECRSLVSNLFVAQAEMFKSVPTGNEEGKYVKRDMTNESVQIMEKLVSQVQSFHSVIEQVLEHQRLNGIIEELRKANSVEDAKIAHLGANLRAAESVLQNALDDARPRLAAFKRANKRPVDVDDVIGYGSKISASLSAPAGWDPSQPLGNSLPPAPTEEMMRAGRLGAMDLELEK 617
+P RDRAR ELRE SLV L + F +G G+ V + +I ++L+ + + S+++++++HQ +N +IE++R + E+ K+ LG LR AE LQ D R+AA + A K V+V D++ +KI +S +AP W P++PLGN LPPAP EEMMR+G LG + L K
Sbjct: 7 IPARDRARVELREFESLVRLLI----QYFDLSASGRMPGEDVL-----QPDRIAQELIERQKVLRSIVDELVQHQNMNKLIEKVRASLQREEQKLVQLGGTLRGAELCLQGPDIDHEARIAALEGAKK--VNVKDIVELAAKIGSSYAAPPNWTPTEPLGNHLPPAPPEEMMRSGHLGKVCTGLPK 181
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A7S2ZT46_9RHOD (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT46_9RHOD) HSP 1 Score: 118 bits (295), Expect = 2.950e-26 Identity = 72/186 (38.71%), Postives = 109/186 (58.60%), Query Frame = 0
Query: 432 VPIRDRARDELRECRSLVSNLFVAQAEMFKSVPTGNEEGKYVKRDMTNESVQIMEKLVSQVQSFHSVIEQVLEHQRLNGIIEELRKANSVEDAKIAHLGANLRAAESVLQNALDDARPRLAAFKRANKRPVDVDDVIGYGSKISASLSAPAGWDPSQPLGNSLPPAPTEEMMRAGRLGAMDLELEK 617
+P RDRAR ELRE SLV L + ++ S G+ D+ +I ++L+ + + S+ ++++HQ +N +IE++R + E+ K+ LG LR AE LQ D R+AA + A K V+V D++ +KI +S SAP W P++PLGN LPPAPTEEMMR+G LG + ++ K
Sbjct: 7 IPARDRARVELREIESLV-RLLIQYFDLSAS-------GRMPSEDVLQPD-RIAQELIERQKVLRSIAGELVQHQNMNKLIEKVRASLQREEQKLVQLGGTLREAELRLQGPDMDHEARIAALEGAKK--VNVKDIVELAAKIGSSYSAPPNWTPTEPLGNRLPPAPTEEMMRSGHLGKVRMDPPK 181
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A7S2ZU48_9RHOD (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZU48_9RHOD) HSP 1 Score: 102 bits (254), Expect = 7.640e-22 Identity = 54/127 (42.52%), Postives = 82/127 (64.57%), Query Frame = 0
Query: 483 QIMEKLVSQVQSFHSVIEQVLEHQRLNGIIEELRKANSVEDAKIAHLGANLRAAESVLQNALDDARPRLAAFKRANKRPVDVDDVIGYGSKISASLSAPAGWDPSQPLGNSLPPAPTEEMMRAGRLG 609
+I ++L+ + + S+ ++++HQ +N +IE++R + E+ K+ LG LR AE LQ D R+AA + A K V+V D++ +KI +S SAP W P++PLGN LPPAPTEEMMR+G LG
Sbjct: 20 RIAQELIERQKVLRSIAGELVQHQNMNKLIEKVRASLQREEQKLVQLGGTLREAELRLQGPDMDHEARIAALEGAKK--VNVKDIVELAAKIGSSYSAPPNWTPTEPLGNRLPPAPTEEMMRSGHLG 144
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A1X6P309_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P309_PORUM) HSP 1 Score: 99.0 bits (245), Expect = 5.110e-18 Identity = 63/181 (34.81%), Postives = 87/181 (48.07%), Query Frame = 0
Query: 431 NVPIRDRARDELRECRSLVSNLFVAQAEMFKSVPTGNEEGKYVKRDMTNESVQIMEKLVSQVQSFHSVIEQVLEHQRLNGIIEELRKANSVEDAKIAHLGANLRAAESVLQNALDDARPRLAAFKRANKRPVDVDDVIGYGSKISASLSAPAGWDPSQPLGNSLPPAPTEEMMRAGRLGAM 611
+VP+RDRAR LRECRSLV+ LF A + G + + + Q+ME +++ EHQR I L Q ALD ARPRL A + RP+ V +I G++++ +++AP GW P QPLG S+PPA T+E M GRL A+
Sbjct: 101 SVPVRDRARTVLRECRSLVARLFEAVDALV---------GGRMSSEAVMQPEQVMEAXXXXXXXXXXXXDELTEHQRTAATIARLTAXXXXXXXXXXXXXXXXXXXXXXXQGALDAARPRLVAAAASAARPLPVPALIAAGARLAPAIAAPPGWAPPQPLGGSVPPAVTDEAMWGGRLAAL 272
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A1B6DGF2_9HEMI (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DGF2_9HEMI) HSP 1 Score: 69.7 bits (169), Expect = 1.520e-9 Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 0
Query: 480 ESVQIMEKLVSQVQSFHSVIEQVLEHQRLNGIIEELRKANSVEDAKIAHLGANLRAAESVLQNALDDARPRLAAFKRANKRPVDVDDVIGYGSKISAS--LSAPAGWDPSQPLGNSLPPAPTEEMMRAGRLGAMD 612
E + + E LVS+ ++ E ++N ++ L+ +D I L L+ AE VL A+ AR +L A RANKRPV +++I + +ISAS + AP W P P P PT+ MR G LG M+
Sbjct: 44 EQLHLTELLVSKDNELKEMLNLASEQAKINQKMDILKAEVEQQDQDIQQLQRQLKEAEQVLATAIFQARQKLQAINRANKRPVPSEELIKFAHRISASNAVCAPLTWQPGDPRR----PYPTDIEMRLGFLGRMN 174
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A444SYH5_ARMVU (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Armadillidium TaxID=13346 RepID=A0A444SYH5_ARMVU) HSP 1 Score: 64.3 bits (155), Expect = 7.630e-8 Identity = 44/138 (31.88%), Postives = 71/138 (51.45%), Query Frame = 0
Query: 474 KRDMTNESVQIMEKLVSQVQSFHSVIEQVLEHQRLNGIIEELRKANSVEDAKIAHLGANLRAAESVLQNALDDARPRLAAFKRANKRPVDVDDVIGYGSKISA--SLSAPAGWDPSQPLGNSLPPAPTEEMMRAGRLG 609
+R +NE Q+++ L+++ + ++ E + GI+E ++ + I L L A L AL AR +L + RANKRPV+ +++I Y +IS+ S++AP W P P PT+ MRAG LG
Sbjct: 34 QRLSSNEQTQLIQLLLTKDEELKETMKVAGEQAVVAGIMESVQAEVDKHEMMIVQLEKQLYEAAHTLSVALYQARQKLDSISRANKRPVNSEELIKYAHRISSTYSVAAPTNWQQGDPRR----PYPTDHEMRAGFLG 167
BLAST of Gvermi5336.t1 vs. uniprot
Match: A0A423SZI8_PENVA (Mediator of RNA polymerase II transcription subunit 4 n=6 Tax=Penaeus TaxID=133894 RepID=A0A423SZI8_PENVA) HSP 1 Score: 61.6 bits (148), Expect = 6.860e-7 Identity = 44/138 (31.88%), Postives = 68/138 (49.28%), Query Frame = 0
Query: 474 KRDMTNESVQIMEKLVSQVQSFHSVIEQVLEHQRLNGIIEELRKANSVEDAKIAHLGANLRAAESVLQNALDDARPRLAAFKRANKRPVDVDDVIGYGSKISAS--LSAPAGWDPSQPLGNSLPPAPTEEMMRAGRLG 609
+R ++ Q++E L+ + I+ + R+ I+E ++ D I L L A L AL AR +L + RANKRPV+ +++I Y +IS++ +SAP W P P PT+ MRAG LG
Sbjct: 34 QRLSAHDQAQLIELLIHKDTELKETIKLASDQARIAEIMETVQAEVDRHDQMILQLEKQLHDAHHTLSVALYQARQKLQSIARANKRPVNSEELIKYAHRISSTYAVSAPDNWQQGDPRR----PYPTDLEMRAGYLG 167 The following BLAST results are available for this feature:
BLAST of Gvermi5336.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 9
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5336.t1 ID=Gvermi5336.t1|Name=Gvermi5336.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=628bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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