Gvermi5326.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5326.t1
Unique Name	Gvermi5326.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	504

Homology

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BLAST of Gvermi5326.t1 vs. uniprot
Match: A0A2V3J698_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J698_9FLOR)

HSP 1 Score: 439 bits (1129), Expect = 2.270e-147
Identity = 271/505 (53.66%), Postives = 324/505 (64.16%), Query Frame = 0

Query:    1 MSAVHNDPRARAAPPAHPRPYAANPHMFIDVLRIPSIADAVDEAARLLRLGIVRAMQANPXXXXXXXXXXXXXXXXXXKDARAAKPPAHAAAAQRDPVSVYSAVTKRVSKAPEDAPKKEPPXXXPPRPSAALKGWNSAKKAGPSILSKRNLANPTSVFQPAPKREKRSDAQHNESAHXXXXXXXXXXXXXXXXXXXXXXXXXX-AKGTQPHAHTKVPQPPTTSREHHAANVPTAQPQSXXXXXXXXXXXXXANKRVDQHQHASARHQSKTITQPSENGSAPTPAGGEKHAREPNSHSSASDVWAKALSASNAENALKPKSTL-MVGARKSGLPASWGQVSSSRAASKQPSVLSMLRKPAGLAHAKLQLARNGTNPLLSVSQSGARTPPARLSANAVIPMPSTTGLEVQYVPGSEVIGGVRPNGYTVSRQGVVKPVITFNPKPKVPHKLRQTSVEKLFEAWRDNQHLVEGEALAKALRTEQEMYASANTRVDYRAAVTVKLKEIRK 503
            M+ VH DPR RA+  +  R Y  NPHMFIDVLRIPSI  AV+EA+RLLR+GI+RAMQ+NP                  K AR  K    A ++QRDPVSVYSAVTK VSK  ED  KKE     P RP+  LKGWNS KKAGPSILSKRNL N  SVFQPAPKREK++D   N+S                              +G QP +     +PPT  R       PTA                    +  Q++ +S +  S+T T         T     + + +  +  SAS+VWAKALS SN+E   K K++L +VG R+SGLPASW  VS +R +SKQPSV+S+LRKP+GLA AK Q+A +G + L SV+Q+ +    +  + +AVIPMP+ TGL++QYVPGSEVIGGVRPNGYTVSRQGVVKPVITFNPK KVPHKLRQTSVEKLFEAWRDNQ LVEGEALA ALRTEQEMYA+AN RVDYRAAVTVKLK++RK
Sbjct:    1 MNNVHKDPRLRASSTSDGRSYVRNPHMFIDVLRIPSITQAVEEASRLLRVGIIRAMQSNPGAESDSETA---------KQARNHKASTPATSSQRDPVSVYSAVTKCVSKPTEDGAKKEGKSTEPERPALPLKGWNSEKKAGPSILSKRNLPNSQSVFQPAPKREKKNDIPQNDSTKKKRHENESSTRVGKNKDNIEGKTDLSDVQGQQPTS----AKPPTDPR-------PTAPAHQEL--------------KPAQNRISSNKVGSQTTTAMGTTDFVSTQTSVSQKSEDTGNKRSASEVWAKALSVSNSERTSKQKASLSIVGGRRSGLPASWSHVSGTRTSSKQPSVISLLRKPSGLAQAKSQMASSGGSVLPSVAQAMSSAHKSNTNTSAVIPMPNMTGLQIQYVPGSEVIGGVRPNGYTVSRQGVVKPVITFNPKSKVPHKLRQTSVEKLFEAWRDNQKLVEGEALAMALRTEQEMYAAANGRVDYRAAVTVKLKDVRK 471

The following BLAST results are available for this feature:

BLAST of Gvermi5326.t1 vs. uniprot

BLAST of Gvermi5326.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J698_9FLOR	2.270e-147	53.66	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..236

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24228	contig	ScGOVlb_24228:1247100..1248704 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5326.t1	Gvermi5326.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24228 1247100..1248704 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5326.t1 ID=Gvermi5326.t1|Name=Gvermi5326.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=504bp
MSAVHNDPRARAAPPAHPRPYAANPHMFIDVLRIPSIADAVDEAARLLRL
GIVRAMQANPAAPAAPAPVPAAAAAAAAKDARAAKPPAHAAAAQRDPVSV
YSAVTKRVSKAPEDAPKKEPPPPDPPRPSAALKGWNSAKKAGPSILSKRN
LANPTSVFQPAPKREKRSDAQHNESAHAHAHAHAHAHAHAHAHSSQPHPS
PKPAKGTQPHAHTKVPQPPTTSREHHAANVPTAQPQSAPPQGAPPQNHPA
ANKRVDQHQHASARHQSKTITQPSENGSAPTPAGGEKHAREPNSHSSASD
VWAKALSASNAENALKPKSTLMVGARKSGLPASWGQVSSSRAASKQPSVL
SMLRKPAGLAHAKLQLARNGTNPLLSVSQSGARTPPARLSANAVIPMPST
TGLEVQYVPGSEVIGGVRPNGYTVSRQGVVKPVITFNPKPKVPHKLRQTS
VEKLFEAWRDNQHLVEGEALAKALRTEQEMYASANTRVDYRAAVTVKLKE
IRK*