Gvermi5319.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5319.t1
Unique NameGvermi5319.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length145
Homology
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A2V3IX20_9FLOR (Very-long-chain 3-oxoacyl-CoA reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX20_9FLOR)

HSP 1 Score: 270 bits (690), Expect = 3.280e-88
Identity = 127/144 (88.19%), Postives = 131/144 (90.97%), Query Frame = 0
Query:    1 MFRGGGSKKPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSEDARSKGGNRPQRRDSRASSASIDSXXXXXXXXXXFFSKK 144
            MFRGGGSKK +APEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLG+SED RSK G+RPQRRDSRASSAS+DS          FFSKK
Sbjct:  225 MFRGGGSKKSAAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGSSEDTRSKSGHRPQRRDSRASSASVDSSASRRKKGTGFFSKK 368          
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A7S1XHG9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHG9_9RHOD)

HSP 1 Score: 195 bits (496), Expect = 9.640e-62
Identity = 91/128 (71.09%), Postives = 101/128 (78.91%), Query Frame = 0
Query:    9 KPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSEDARSKGGNRPQR--------RDSRASSASID 128
            K    +GVKTEF++ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGIDETSLNNVRYVL EPDL TS+ A  +   R +R        + S+ SS ++D
Sbjct:    8 KVKTVDGVKTEFIYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRYVLTEPDLSTSDTADGRSQTRGKRASATLSGSQSSQGSSGAVD 135          
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A5J4Z5H3_PORPP (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5H3_PORPP)

HSP 1 Score: 193 bits (490), Expect = 1.460e-60
Identity = 89/116 (76.72%), Postives = 93/116 (80.17%), Query Frame = 0
Query:   14 EGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSEDARSKGGNRPQRRDSRASSASIDS 129
            +GVK EFV+ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGIDETSLNNVRYVLPEPDL     A   G  R + R S A   +  S
Sbjct:   17 DGVKVEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRYVLPEPDLSQEGMATGAGDPRQRERGSAARPGAASS 132          
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A7S0ZGK0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGK0_9RHOD)

HSP 1 Score: 191 bits (485), Expect = 4.000e-60
Identity = 89/115 (77.39%), Postives = 95/115 (82.61%), Query Frame = 0
Query:   12 APEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSEDARSKGGNRPQRRDSRASSAS 126
            A +GVK EFV+ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGIDETSLNNVR+VLPEPDL    D  +    RP  R  RAS+ +
Sbjct:   11 AVDGVKVEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRFVLPEPDLSAERDGVADPRARP--RGQRASATA 123          
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A2V3IYZ1_9FLOR (Phosphoglucan phosphatase LSF1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYZ1_9FLOR)

HSP 1 Score: 188 bits (477), Expect = 5.440e-59
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0
Query:    6 GSKKPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSEDARSKG 111
            GS + +  E VKTEFV+ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGID+TSLNNVR VLP+PDL  + D    G
Sbjct:    3 GSSRKAKVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLNDTADTPRSG 108          
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A1X6NSE9_PORUM (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSE9_PORUM)

HSP 1 Score: 187 bits (474), Expect = 9.320e-58
Identity = 87/112 (77.68%), Postives = 93/112 (83.04%), Query Frame = 0
Query:    7 SKKPSA---PEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSEDARSKGGNRP 115
            SKK +A    EGVKTEFV+ADGAKDDVQLSGDWNDWKAIQ FHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGID+TSLNNVRYVLPEP+L  +   R+     P
Sbjct:    3 SKKKNANYREEGVKTEFVYADGAKDDVQLSGDWNDWKAIQCFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRYVLPEPELDGTGGLRTPALTMP 114          
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A1X6NM66_PORUM (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM66_PORUM)

HSP 1 Score: 185 bits (470), Expect = 1.060e-57
Identity = 91/126 (72.22%), Postives = 95/126 (75.40%), Query Frame = 0
Query:   14 EGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSEDAR-------------SKGGNRPQRRDSRASSAS 126
            EGVKTEFV+ADGA DDVQLSGDWNDWKAIQMF E AG WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGID+ SLNNVRYVLPEPDLG                   S    R  RRDSR+S+AS
Sbjct:   13 EGVKTEFVYADGANDDVQLSGDWNDWKAIQMFCECAGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDNSLNNVRYVLPEPDLGADRGGXXXXXXXXXXXXXXSLPQQRLSRRDSRSSAAS 138          
BLAST of Gvermi5319.t1 vs. uniprot
Match: UPI001E1D6066 (uncharacterized protein LOC123543401 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6066)

HSP 1 Score: 182 bits (461), Expect = 2.320e-56
Identity = 82/105 (78.10%), Postives = 87/105 (82.86%), Query Frame = 0
Query:   17 KTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSEDARSKGGNRPQRRDSR 121
            KTEFVFADGA+DDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGID+TSLNNVR VLP+PDL       +KG      R S+
Sbjct:    4 KTEFVFADGARDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRCVLPQPDLDGKGGPTAKGPRESTARTSK 108          
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A7S3EHH0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EHH0_9RHOD)

HSP 1 Score: 178 bits (451), Expect = 7.710e-55
Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 0
Query:   14 EGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSED-ARSKGGNRPQRRDSRASSASIDS 129
            +GVK EFV+ DGA+DDVQLSGDW DW+AIQMFHEG G WSVVTPVPPG HEFKFIVDGEWKHS RHPTIGIDETSLNNVR VLPEP + + +  A    G+ P  + SRA S + D+
Sbjct:   13 DGVKVEFVYCDGARDDVQLSGDWTDWRAIQMFHEGGGMWSVVTPVPPGAHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRVVLPEPRIESQKTIAEPPAGSIPLSKTSRAGSRASDT 129          
BLAST of Gvermi5319.t1 vs. uniprot
Match: A0A7S0BFF0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFF0_9RHOD)

HSP 1 Score: 176 bits (446), Expect = 6.500e-54
Identity = 81/112 (72.32%), Postives = 91/112 (81.25%), Query Frame = 0
Query:   14 EGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSED-ARSKGGNRPQRRDSRASS 124
            +GVK EFV+ DGA+DDVQLSGDW DW+AIQMFHEG G WSVVTPVPPG HEFKFIVDGEWKHS RHPTIGIDETSLNNVR VLPEP + + +  A    G+ P  + SRA+S
Sbjct:   13 DGVKVEFVYCDGARDDVQLSGDWTDWRAIQMFHEGGGMWSVVTPVPPGAHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRVVLPEPRIESQKTIAEPPAGSIPLSKTSRAAS 124          
The following BLAST results are available for this feature:
BLAST of Gvermi5319.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX20_9FLOR3.280e-8888.19Very-long-chain 3-oxoacyl-CoA reductase n=1 Tax=Gr... [more]
A0A7S1XHG9_9RHOD9.640e-6271.09Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z5H3_PORPP1.460e-6076.72SNF1-related protein kinase regulatory subunit bet... [more]
A0A7S0ZGK0_9RHOD4.000e-6077.39Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2V3IYZ1_9FLOR5.440e-5979.25Phosphoglucan phosphatase LSF1, chloroplastic n=1 ... [more]
A0A1X6NSE9_PORUM9.320e-5877.68AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A1X6NM66_PORUM1.060e-5772.22AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
UPI001E1D60662.320e-5678.10uncharacterized protein LOC123543401 n=1 Tax=Merce... [more]
A0A7S3EHH0_9RHOD7.710e-5570.09Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BFF0_9RHOD6.500e-5472.32Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 8..97
e-value: 5.5E-20
score: 73.0
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 17..96
e-value: 6.7E-17
score: 61.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..144
NoneNo IPR availablePANTHERPTHR103435'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNITcoord: 9..123
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 17..95
e-value: 5.24072E-23
score: 84.1876
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 19..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:1233112..1233621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5319.t1Gvermi5319.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 1233112..1233621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5319.t1 ID=Gvermi5319.t1|Name=Gvermi5319.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=145bp
MFRGGGSKKPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAG
TWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPD
LGTSEDARSKGGNRPQRRDSRASSASIDSSASRKKKGGGFFSKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR014756Ig_E-set