Gvermi5289.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5289.t1
Unique NameGvermi5289.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length607
Homology
BLAST of Gvermi5289.t1 vs. uniprot
Match: A0A2V3J6F9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F9_9FLOR)

HSP 1 Score: 772 bits (1994), Expect = 4.360e-274
Identity = 393/610 (64.43%), Postives = 491/610 (80.49%), Query Frame = 0
Query:    1 MREATWTPEAKKLFLRHLAAKVRYAALPSTEEDDILVSLVGKLHPNTCSVVQFSYIYDMSIVDEKTASALDSDLQSIQKQSTSIFVDGSAVADKFWETLQSDTNFRPSDNPQVYNVLIYDAISVAPQYGYRAEGGGAVGTVALASEKRFAVIDVGAKPFFL-AAESLTVGDLLAANSKSWGDYALELHSITSKLLTPPASTKMRRFPQETRLFFKLSLVDVSAVIGRMSGVAGDSEGNKPLGVSFNAKQFETVLNTLFHNHVIPDKEVSISTEEVDMMMDARMAMAVSRSFSVKGLEMVLDSELLIRSLMWNSTERYGYFVDSSFIAHIPMYLFSFADDSRITHFDTGEQLRARVVGKEAVVLAENRLRDASVDEHVSITSEATKEVLELLCGLEQDTLSQLSAQNGVVPVILRDIARRNILVQELDWSQ-VASWKAKELLDFEGLDSRLIPHQKGSRIEMGRDKVRDSLRTLSDGWHKAAMSVSFENIESATMNLMGLSNELADMLHEEVCNQALPEEILLKAEV--MGDKHLSGKQEHGSRFPVYVVFSAIAGIVCGAFMHRKAVKQSSFRGTYLDDLSIAPAVRNLDVTGTSQWFSTLTSSYKSKTH 606
            MRE++WTP AK+ FL+ L   VR+ ALPS  +DD    L+GKLHPN CSVVQFSY YD+  VD KTAS LD+ L S+Q  + S++V+G+AVAD+FWE LQS+ NF+ S +P+VYNVL+Y+A+SVAPQYGYRAE G  +GT+A++SE RFAVIDVGAKPFFL +AE LT GDLL A S +  +YA ELH I S+LLTPPAS KMRRFP ETRL FKLSL+DVSAVIGRM GVAGDS+GNK LG +F+  QF  VLNT+FHNH +PDKEV++S E++DM  +A MAMAVSR+FS+KGL+M+LDSE L+ S+ WN++E+Y YFVDSSF+AH PMYLFSFADDSR+THF+TGE++RA VV  E +++ ENRLRD   DE+VS TSEATKEVLELLCGL Q +L  +S++NGVVP+ILRDIA+RNI++QE+DWS+ VA+WK+KELL+FEGLDSRLIPH KGS++ + R K+   L+ L   W KA++S+S EN+ES T++L  +S E+AD LHEEVC Q LPEEILLKAE   + +K LS  Q+      VY+V SAI+G+VCGA++H KAVK+S FR +YLDDLSI   VRN DV+ T+QWFSTLTSSYKSKTH
Sbjct:   45 MRESSWTPAAKQDFLQQLRKFVRHTALPSEVDDDTSAFLIGKLHPNACSVVQFSYEYDIHFVDAKTASQLDNILTSVQGNTPSMYVNGTAVADRFWEALQSNVNFQTSKHPEVYNVLMYNAMSVAPQYGYRAEEGSTIGTIAISSENRFAVIDVGAKPFFLQSAEYLTAGDLLMAKSGAPPEYASELHGIVSQLLTPPASRKMRRFPPETRLAFKLSLIDVSAVIGRMPGVAGDSQGNKSLGSTFSEDQFIRVLNTVFHNHAVPDKEVTVSIEKLDMTENANMAMAVSRAFSMKGLDMILDSESLVHSITWNASEQYRYFVDSSFVAHFPMYLFSFADDSRVTHFETGERVRAVVVDNEVLIMTENRLRDDK-DEYVSTTSEATKEVLELLCGLGQKSLPFISSKNGVVPLILRDIAKRNIVIQEIDWSRSVAAWKSKELLNFEGLDSRLIPHDKGSQMAVSRAKIEKGLKGLVAEWQKASVSMSLENVESVTLHLAQISREMADRLHEEVCKQPLPEEILLKAEAEDLSEKKLSVAQKKSFALAVYLVLSAISGLVCGAYLHHKAVKKSGFRPSYLDDLSIGQTVRNFDVSTTTQWFSTLTSSYKSKTH 653          
BLAST of Gvermi5289.t1 vs. uniprot
Match: R7QMS6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMS6_CHOCR)

HSP 1 Score: 438 bits (1126), Expect = 1.150e-144
Identity = 249/526 (47.34%), Postives = 334/526 (63.50%), Query Frame = 0
Query:   84 IFVDGSAVADKFWETLQSDTNFRPSDNPQVYNVLIYDAISVAPQYGYRAEGGGAVGTVALASEKRFAVIDVGAKPFFL--AAESLTVGDLLAANSKSWGDYALELHSITSKLLTPPASTKMRRFPQETRLFFKLSLVDVSAVIGRMSGVAGDSEGNKPLGVSFNAKQFETVLNTLFHNHVIPDKEVSISTEEVDMMMDARMAMAVSRSFSVKGLEMVLDSELLIRSLMWNSTERYGYFVDSSFIAHIPMYLFSFADDSRITHFDTGEQLRARVVGKEAVVLAENRLRDASVDEHVSITSEATKEVLELLCGLEQDTLSQLSAQNGVVPVILRDIARRNILVQELDWSQV-ASWKAKELLDFEGLDSRLIPHQKGSRIEMGRDKVRDSLRTLSDGWHKAAMSVSFENIESATMNLMGLSNELADMLHEEVCNQALPEEILLKAEVMGDKHLSGKQEHGSRFPVYVVFSAIAGIVCGAFMHRKAVKQSSFRGTYLDDLSIAPAVRNLDVTGTSQWFSTLTSSYKSKTH 606
            +F   +AVAD F+  L++D  F PS+ P+VY +++Y+A SVAPQ GY AE G    T+A+++E R AV+DV AKP+FL  +AES T G+ L A  +    YA +L  I + L TP  S  MRRFP ET L F L LVDVSAV+GRM GV+GDS+ NKPLG +F+   F  ++  +F      +K VSI+ E VD+  D  MAMA++R+FSV+GL++ LDSE L   L+ N TE   YFVD SF+AH+PM LFSFADDSR+THF TGE +R+ VV K AV + ENRLRDA    + + TSEA K+VLE++CG+ +  L  L A+     V+L DI RRN+L QELDWS+  A+ KA +LL+FEGLD RLIPH+KGS I   R  VRDSL+ L   W +A  ++S  N+E A++ ++  S  L + LHEE+CNQ L EEILL AEV G             + +Y +   IAG + G   H++  +    R   L ++ ++          T  WFSTLT+S K KT+
Sbjct:    1 MFASSAAVADAFYHILRTDHAFTPSEGPRVYTLVLYNAASVAPQRGYVAEQGAPPRTIAVSTENRLAVLDVDAKPYFLDNSAES-TPGEQLLALGREPALYADKLADIAAALFTPSVSPNMRRFPHETTLAFTLKLVDVSAVVGRMGGVSGDSKANKPLGSTFDPAVFHQLVQDVFRG--AGEKRVSIAVEHVDVENDLVMAMALARAFSVEGLDIALDSESLNVDLVQNETEGAAYFVDKSFVAHVPMVLFSFADDSRVTHFKTGESVRSMVVEKNAVFMIENRLRDAKEKTYATTTSEAAKDVLEMICGVNRHELGYLDARKRKNSVLLHDIVRRNVLRQELDWSEASAARKAVDLLNFEGLDPRLIPHEKGSAIADSRAVVRDSLQLLYGAWERAVETLSVANVEGASLQVIRASKRLEEQLHEEICNQPLSEEILLNAEVEGQDVKKPNNVVWLFYLMYAILPVIAGGMFGFTYHQRMQRNIQERSAILGEIPVSSPRHKFVPPSTGLWFSTLTNSDKPKTN 523          
The following BLAST results are available for this feature:
BLAST of Gvermi5289.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6F9_9FLOR4.360e-27464.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMS6_CHOCR1.150e-14447.34Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 487..507
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..539
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 540..559
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 560..606
NoneNo IPR availableTMHMMTMhelixcoord: 540..559

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:977569..979389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5289.t1Gvermi5289.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 977569..979389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5289.t1 ID=Gvermi5289.t1|Name=Gvermi5289.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=607bp
MREATWTPEAKKLFLRHLAAKVRYAALPSTEEDDILVSLVGKLHPNTCSV
VQFSYIYDMSIVDEKTASALDSDLQSIQKQSTSIFVDGSAVADKFWETLQ
SDTNFRPSDNPQVYNVLIYDAISVAPQYGYRAEGGGAVGTVALASEKRFA
VIDVGAKPFFLAAESLTVGDLLAANSKSWGDYALELHSITSKLLTPPAST
KMRRFPQETRLFFKLSLVDVSAVIGRMSGVAGDSEGNKPLGVSFNAKQFE
TVLNTLFHNHVIPDKEVSISTEEVDMMMDARMAMAVSRSFSVKGLEMVLD
SELLIRSLMWNSTERYGYFVDSSFIAHIPMYLFSFADDSRITHFDTGEQL
RARVVGKEAVVLAENRLRDASVDEHVSITSEATKEVLELLCGLEQDTLSQ
LSAQNGVVPVILRDIARRNILVQELDWSQVASWKAKELLDFEGLDSRLIP
HQKGSRIEMGRDKVRDSLRTLSDGWHKAAMSVSFENIESATMNLMGLSNE
LADMLHEEVCNQALPEEILLKAEVMGDKHLSGKQEHGSRFPVYVVFSAIA
GIVCGAFMHRKAVKQSSFRGTYLDDLSIAPAVRNLDVTGTSQWFSTLTSS
YKSKTH*
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